RNA–Protein interactions for RNA: ENST00000557960.1

IDH3A-203, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 3

Gene IDH3A, Length 424 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-203ENST00000557960 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
IDH3A-203ENST00000557960 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
IDH3A-203ENST00000557960 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
IDH3A-203ENST00000557960 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
IDH3A-203ENST00000557960 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
IDH3A-203ENST00000557960 FOXD1Q16676 465 aa16.58■□□□□ 0.24
IDH3A-203ENST00000557960 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
IDH3A-203ENST00000557960 ADRA2BP18089 450 aa16.02■□□□□ 0.16
IDH3A-203ENST00000557960 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
IDH3A-203ENST00000557960 MSH5O43196 834 aa15.22■□□□□ 0.03
IDH3A-203ENST00000557960 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
IDH3A-203ENST00000557960 KCNA4P22459 653 aa14.64□□□□□ -0.07
IDH3A-203ENST00000557960 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
IDH3A-203ENST00000557960 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
IDH3A-203ENST00000557960 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
IDH3A-203ENST00000557960 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
IDH3A-203ENST00000557960 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
IDH3A-203ENST00000557960 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
IDH3A-203ENST00000557960 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
IDH3A-203ENST00000557960 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
IDH3A-203ENST00000557960 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
IDH3A-203ENST00000557960 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
IDH3A-203ENST00000557960 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
IDH3A-203ENST00000557960 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
IDH3A-203ENST00000557960 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
IDH3A-203ENST00000557960 ZBTB22O15209 634 aa13.5□□□□□ -0.25
IDH3A-203ENST00000557960 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
IDH3A-203ENST00000557960 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
IDH3A-203ENST00000557960 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
IDH3A-203ENST00000557960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
IDH3A-203ENST00000557960 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
IDH3A-203ENST00000557960 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
IDH3A-203ENST00000557960 RNF39Q9H2S5 420 aa13.08□□□□□ -0.32
IDH3A-203ENST00000557960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
IDH3A-203ENST00000557960 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
IDH3A-203ENST00000557960 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
IDH3A-203ENST00000557960 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
IDH3A-203ENST00000557960 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
IDH3A-203ENST00000557960 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
IDH3A-203ENST00000557960 APLP2Q06481 763 aa12.83□□□□□ -0.36
IDH3A-203ENST00000557960 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
IDH3A-203ENST00000557960 CAPN15O75808 1086 aa12.68□□□□□ -0.38
IDH3A-203ENST00000557960 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
IDH3A-203ENST00000557960 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-203ENST00000557960 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
IDH3A-203ENST00000557960 POLA2Q14181 598 aa12.49□□□□□ -0.41
IDH3A-203ENST00000557960 DSG3P32926 999 aa12.48□□□□□ -0.41
IDH3A-203ENST00000557960 ABCB7O75027 752 aa12.45□□□□□ -0.42
IDH3A-203ENST00000557960 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
IDH3A-203ENST00000557960 ZBTB12Q9Y330 459 aaPredicted RBP12.27□□□□□ -0.45
IDH3A-203ENST00000557960 FBLN2P98095 1184 aa12.25□□□□□ -0.45
IDH3A-203ENST00000557960 FKBP8Q14318 412 aa12.15□□□□□ -0.46
IDH3A-203ENST00000557960 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
IDH3A-203ENST00000557960 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
IDH3A-203ENST00000557960 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
IDH3A-203ENST00000557960 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
IDH3A-203ENST00000557960 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
IDH3A-203ENST00000557960 PROM2Q8N271 834 aa11.92□□□□□ -0.5
IDH3A-203ENST00000557960 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
IDH3A-203ENST00000557960 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
IDH3A-203ENST00000557960 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
IDH3A-203ENST00000557960 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
IDH3A-203ENST00000557960 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
IDH3A-203ENST00000557960 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
IDH3A-203ENST00000557960 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
IDH3A-203ENST00000557960 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
IDH3A-203ENST00000557960 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
IDH3A-203ENST00000557960 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
IDH3A-203ENST00000557960 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
IDH3A-203ENST00000557960 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
IDH3A-203ENST00000557960 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
IDH3A-203ENST00000557960 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
IDH3A-203ENST00000557960 MIER1Q8N108 512 aa11.4□□□□□ -0.58
IDH3A-203ENST00000557960 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
IDH3A-203ENST00000557960 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
IDH3A-203ENST00000557960 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
IDH3A-203ENST00000557960 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
IDH3A-203ENST00000557960 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
IDH3A-203ENST00000557960 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
IDH3A-203ENST00000557960 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
IDH3A-203ENST00000557960 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
IDH3A-203ENST00000557960 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
IDH3A-203ENST00000557960 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
IDH3A-203ENST00000557960 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
IDH3A-203ENST00000557960 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
IDH3A-203ENST00000557960 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
IDH3A-203ENST00000557960 PRKAR2AP13861 404 aaKnown RBP11.21□□□□□ -0.61
IDH3A-203ENST00000557960 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
IDH3A-203ENST00000557960 NUBP1P53384 320 aa11.14□□□□□ -0.63
IDH3A-203ENST00000557960 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
IDH3A-203ENST00000557960 PKD2Q13563 968 aa11.08□□□□□ -0.64
IDH3A-203ENST00000557960 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
IDH3A-203ENST00000557960 CIZ1Q9ULV3 898 aaPredicted RBP11.02□□□□□ -0.65
IDH3A-203ENST00000557960 GSE1Q14687 1217 aa11□□□□□ -0.65
IDH3A-203ENST00000557960 FAM212AQ96EL1 285 aa11□□□□□ -0.65
IDH3A-203ENST00000557960 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
IDH3A-203ENST00000557960 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
IDH3A-203ENST00000557960 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
IDH3A-203ENST00000557960 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
IDH3A-203ENST00000557960 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms