RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 NCBP2P52298 156 aaKnown RBP eCLIP4.73□□□□□ -1.656e-71■■■□□ 15.1
HNRNPC-233ENST00000557768 PCBP2Q15366 365 aaKnown RBP eCLIP6.23□□□□□ -1.413e-70■■■□□ 17
HNRNPC-233ENST00000557768 DDX3XO00571 662 aaKnown RBP eCLIP6.02□□□□□ -1.451e-57■■□□□ 12.4
HNRNPC-233ENST00000557768 RBM22Q9NW64 420 aaKnown RBP eCLIP5.22□□□□□ -1.574e-42■■■■■ 28.1
HNRNPC-233ENST00000557768 SF3A3Q12874 501 aaKnown RBP eCLIP5.39□□□□□ -1.551e-41■■■■□ 19.7
HNRNPC-233ENST00000557768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.75□□□□□ -1.653e-37■■■■■ 73.4
HNRNPC-233ENST00000557768 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.6□□□□□ -1.352e-34■■□□□ 11.9
HNRNPC-233ENST00000557768 SF3B4Q15427 424 aaKnown RBP eCLIP4.84□□□□□ -1.635e-28■■■■□ 22.6
HNRNPC-233ENST00000557768 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.47□□□□□ -1.051e-23■□□□□ 10.6
HNRNPC-233ENST00000557768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.015e-21■□□□□ 9.7
HNRNPC-233ENST00000557768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.592e-20■□□□□ 8.3
HNRNPC-233ENST00000557768 RBM15Q96T37 977 aaKnown RBP eCLIP5.86□□□□□ -1.471e-17■■■■■ 48.5
HNRNPC-233ENST00000557768 EFTUD2Q15029 972 aaKnown RBP eCLIP4.88□□□□□ -1.636e-17■■■□□ 16.6
HNRNPC-233ENST00000557768 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.734e-16■■■□□ 16.3
HNRNPC-233ENST00000557768 TIAL1Q01085 375 aaKnown RBP eCLIP5.34□□□□□ -1.554e-16■■■□□ 15.3
HNRNPC-233ENST00000557768 U2AF2P26368 475 aaKnown RBP eCLIP5.77□□□□□ -1.496e-16■■■■■ 52.2
HNRNPC-233ENST00000557768 RBM5P52756 815 aaKnown RBP eCLIP6.78□□□□□ -1.325e-14■■□□□ 12.8
HNRNPC-233ENST00000557768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.99□□□□□ -0.971e-13■■■□□ 15.2
HNRNPC-233ENST00000557768 SRSF7Q16629 238 aaKnown RBP eCLIP4.84□□□□□ -1.631e-12■□□□□ 10.4
HNRNPC-233ENST00000557768 EIF3GO75821 320 aaKnown RBP eCLIP3.64□□□□□ -1.834e-12■■■□□ 16.7
HNRNPC-233ENST00000557768 AQRO60306 1485 aaKnown RBP eCLIP9.94□□□□□ -0.826e-12■■■■■ 27.1
HNRNPC-233ENST00000557768 ILF3Q12906 894 aaKnown RBP eCLIP5.3□□□□□ -1.562e-11■■□□□ 13.7
HNRNPC-233ENST00000557768 U2AF1Q01081 240 aaKnown RBP eCLIP7.1□□□□□ -1.276e-11■■□□□ 14.2
HNRNPC-233ENST00000557768 SAFBQ15424 915 aaKnown RBP eCLIP6.11□□□□□ -1.432e-10■□□□□ 9.6
HNRNPC-233ENST00000557768 RPS3P23396 243 aaKnown RBP eCLIP4.99□□□□□ -1.612e-10■■□□□ 12.3
HNRNPC-233ENST00000557768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.54□□□□□ -1.042e-10■□□□□ 8.9
HNRNPC-233ENST00000557768 QKIQ96PU8 341 aaKnown RBP eCLIP5.11□□□□□ -1.599e-10■□□□□ 8.5
HNRNPC-233ENST00000557768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.24□□□□□ -1.411e-9■■■□□ 15.2
HNRNPC-233ENST00000557768 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.71e-9■■□□□ 12.1
HNRNPC-233ENST00000557768 TAF15Q92804 592 aaKnown RBP eCLIP4.53□□□□□ -1.688e-9■□□□□ 10.8
HNRNPC-233ENST00000557768 SRSF1Q07955 248 aaKnown RBP eCLIP5.39□□□□□ -1.551e-8■■■□□ 14.8
HNRNPC-233ENST00000557768 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.1□□□□□ -1.591e-8■■■■■ 38.4
HNRNPC-233ENST00000557768 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.22□□□□□ -1.411e-8■□□□□ 9.2
HNRNPC-233ENST00000557768 TRA2AQ13595 282 aaKnown RBP eCLIP5.3□□□□□ -1.563e-8■■□□□ 11.5
HNRNPC-233ENST00000557768 HNRNPMP52272 730 aaKnown RBP eCLIP8.7□□□□□ -1.022e-7■■■□□ 16.8
HNRNPC-233ENST00000557768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.07□□□□□ -1.62e-7■□□□□ 9.1
HNRNPC-233ENST00000557768 SUB1P53999 127 aaKnown RBP eCLIP3.77□□□□□ -1.812e-7■□□□□ 10.2
HNRNPC-233ENST00000557768 TIA1P31483 386 aaKnown RBP eCLIP4.72□□□□□ -1.652e-7■■■■■ 28.7
HNRNPC-233ENST00000557768 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.93□□□□□ -1.143e-7■■■■■ 34.8
HNRNPC-233ENST00000557768 HNRNPCP07910 306 aaKnown RBP eCLIP4.96□□□□□ -1.623e-7■■□□□ 13.2
HNRNPC-233ENST00000557768 CPSF6Q16630 551 aaKnown RBP eCLIP7.03□□□□□ -1.283e-7■■■□□ 15.6
HNRNPC-233ENST00000557768 POLR2GP62487 172 aaKnown RBP eCLIP3.6□□□□□ -1.838e-7■□□□□ 8.5
HNRNPC-233ENST00000557768 NONOQ15233 471 aaKnown RBP eCLIP5.93□□□□□ -1.468e-7■□□□□ 9.3
HNRNPC-233ENST00000557768 SMNDC1O75940 238 aaKnown RBP eCLIP7.56□□□□□ -1.21e-6■□□□□ 8.2
HNRNPC-233ENST00000557768 XRCC6P12956 609 aaKnown RBP eCLIP5.85□□□□□ -1.473e-6■□□□□ 10.7
HNRNPC-233ENST00000557768 SF3B1O75533 1304 aaKnown RBP eCLIP5.89□□□□□ -1.475e-6■■■■■ 78.7
Retrieved 46 of 46 RNA–protein pairs in 10.8 ms