RNA–Protein interactions for RNA: ENST00000557709.1

AL162872.1-201, humanhuman

TSL 3 BASIC

Gene AL162872.1, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL162872.1-201ENST00000557709 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
AL162872.1-201ENST00000557709 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
AL162872.1-201ENST00000557709 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
AL162872.1-201ENST00000557709 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
AL162872.1-201ENST00000557709 FOXD1Q16676 465 aa18.73■□□□□ 0.59
AL162872.1-201ENST00000557709 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.45
AL162872.1-201ENST00000557709 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
AL162872.1-201ENST00000557709 MSH5O43196 834 aa17.48■□□□□ 0.39
AL162872.1-201ENST00000557709 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
AL162872.1-201ENST00000557709 ADRA2BP18089 450 aa17.47■□□□□ 0.39
AL162872.1-201ENST00000557709 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
AL162872.1-201ENST00000557709 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
AL162872.1-201ENST00000557709 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
AL162872.1-201ENST00000557709 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
AL162872.1-201ENST00000557709 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
AL162872.1-201ENST00000557709 CNKSR2Q8WXI2 1034 aa15.39■□□□□ 0.05
AL162872.1-201ENST00000557709 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
AL162872.1-201ENST00000557709 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
AL162872.1-201ENST00000557709 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
AL162872.1-201ENST00000557709 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
AL162872.1-201ENST00000557709 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
AL162872.1-201ENST00000557709 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
AL162872.1-201ENST00000557709 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
AL162872.1-201ENST00000557709 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
AL162872.1-201ENST00000557709 C1QBPQ07021 282 aaKnown RBP14.71□□□□□ -0.05
AL162872.1-201ENST00000557709 KCNA4P22459 653 aa14.64□□□□□ -0.07
AL162872.1-201ENST00000557709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
AL162872.1-201ENST00000557709 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
AL162872.1-201ENST00000557709 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
AL162872.1-201ENST00000557709 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
AL162872.1-201ENST00000557709 CAPN15O75808 1086 aa14.06□□□□□ -0.16
AL162872.1-201ENST00000557709 DSG3P32926 999 aa14□□□□□ -0.17
AL162872.1-201ENST00000557709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
AL162872.1-201ENST00000557709 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
AL162872.1-201ENST00000557709 APLP2Q06481 763 aa13.88□□□□□ -0.19
AL162872.1-201ENST00000557709 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
AL162872.1-201ENST00000557709 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
AL162872.1-201ENST00000557709 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
AL162872.1-201ENST00000557709 SLC4A1APQ9BWU0 796 aaKnown RBP13.81□□□□□ -0.2
AL162872.1-201ENST00000557709 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
AL162872.1-201ENST00000557709 ABCB7O75027 752 aa13.75□□□□□ -0.21
AL162872.1-201ENST00000557709 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
AL162872.1-201ENST00000557709 ZBTB22O15209 634 aa13.49□□□□□ -0.25
AL162872.1-201ENST00000557709 POLA2Q14181 598 aa13.49□□□□□ -0.25
AL162872.1-201ENST00000557709 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
AL162872.1-201ENST00000557709 POTEHQ6S545 545 aa13.34□□□□□ -0.27
AL162872.1-201ENST00000557709 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
AL162872.1-201ENST00000557709 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
AL162872.1-201ENST00000557709 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
AL162872.1-201ENST00000557709 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
AL162872.1-201ENST00000557709 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
AL162872.1-201ENST00000557709 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
AL162872.1-201ENST00000557709 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
AL162872.1-201ENST00000557709 FBLN2P98095 1184 aa12.88□□□□□ -0.35
AL162872.1-201ENST00000557709 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
AL162872.1-201ENST00000557709 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
AL162872.1-201ENST00000557709 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
AL162872.1-201ENST00000557709 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
AL162872.1-201ENST00000557709 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
AL162872.1-201ENST00000557709 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
AL162872.1-201ENST00000557709 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
AL162872.1-201ENST00000557709 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
AL162872.1-201ENST00000557709 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
AL162872.1-201ENST00000557709 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
AL162872.1-201ENST00000557709 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
AL162872.1-201ENST00000557709 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
AL162872.1-201ENST00000557709 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
AL162872.1-201ENST00000557709 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
AL162872.1-201ENST00000557709 HAX1O00165 279 aa12.48□□□□□ -0.41
AL162872.1-201ENST00000557709 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
AL162872.1-201ENST00000557709 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
AL162872.1-201ENST00000557709 EVX2Q03828 476 aa12.38□□□□□ -0.43
AL162872.1-201ENST00000557709 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
AL162872.1-201ENST00000557709 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
AL162872.1-201ENST00000557709 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
AL162872.1-201ENST00000557709 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
AL162872.1-201ENST00000557709 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
AL162872.1-201ENST00000557709 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
AL162872.1-201ENST00000557709 GABBR2O75899 941 aa12.08□□□□□ -0.48
AL162872.1-201ENST00000557709 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
AL162872.1-201ENST00000557709 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
AL162872.1-201ENST00000557709 PROM2Q8N271 834 aa11.99□□□□□ -0.49
AL162872.1-201ENST00000557709 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
AL162872.1-201ENST00000557709 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
AL162872.1-201ENST00000557709 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
AL162872.1-201ENST00000557709 CLCN6P51797 869 aa11.87□□□□□ -0.51
AL162872.1-201ENST00000557709 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
AL162872.1-201ENST00000557709 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
AL162872.1-201ENST00000557709 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
AL162872.1-201ENST00000557709 GALR2O43603 387 aaPredicted RBP11.74□□□□□ -0.53
AL162872.1-201ENST00000557709 LHX8Q68G74 356 aa11.74□□□□□ -0.53
AL162872.1-201ENST00000557709 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
AL162872.1-201ENST00000557709 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
AL162872.1-201ENST00000557709 FKBP8Q14318 412 aa11.65□□□□□ -0.54
AL162872.1-201ENST00000557709 MIER1Q8N108 512 aa11.65□□□□□ -0.54
AL162872.1-201ENST00000557709 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
AL162872.1-201ENST00000557709 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
AL162872.1-201ENST00000557709 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
AL162872.1-201ENST00000557709 CCDC61Q9Y6R9 512 aa11.59□□□□□ -0.55
AL162872.1-201ENST00000557709 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms