RNA–Protein interactions for RNA: ENST00000557667.5

RBM23-233, Transcript of RNA binding motif protein 23, humanhuman

TSL 1 (best)

Gene RBM23, Length 4,240 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM23-233ENST00000557667 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
RBM23-233ENST00000557667 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.2
RBM23-233ENST00000557667 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
RBM23-233ENST00000557667 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
RBM23-233ENST00000557667 MYO15BQ96JP2 1530 aa15.39■□□□□ 0.05
RBM23-233ENST00000557667 NACADO15069 1562 aa15.07■□□□□ 0
RBM23-233ENST00000557667 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.03
RBM23-233ENST00000557667 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
RBM23-233ENST00000557667 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
RBM23-233ENST00000557667 ABCC9O60706 1549 aa14.6□□□□□ -0.07
RBM23-233ENST00000557667 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
RBM23-233ENST00000557667 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
RBM23-233ENST00000557667 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
RBM23-233ENST00000557667 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
RBM23-233ENST00000557667 UNC13AQ9UPW8 1703 aa14.11□□□□□ -0.15
RBM23-233ENST00000557667 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
RBM23-233ENST00000557667 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.15
RBM23-233ENST00000557667 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
RBM23-233ENST00000557667 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
RBM23-233ENST00000557667 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
RBM23-233ENST00000557667 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
RBM23-233ENST00000557667 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
RBM23-233ENST00000557667 CECR2Q9BXF3 1484 aa13.91□□□□□ -0.18
RBM23-233ENST00000557667 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
RBM23-233ENST00000557667 WIZO95785 1651 aa13.86□□□□□ -0.19
RBM23-233ENST00000557667 EEA1Q15075 1411 aa13.84□□□□□ -0.19
RBM23-233ENST00000557667 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
RBM23-233ENST00000557667 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
RBM23-233ENST00000557667 ATAD2BQ9ULI0 1458 aa13.76□□□□□ -0.21
RBM23-233ENST00000557667 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
RBM23-233ENST00000557667 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
RBM23-233ENST00000557667 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
RBM23-233ENST00000557667 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
RBM23-233ENST00000557667 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
RBM23-233ENST00000557667 PRDM2Q13029 1718 aa13.58□□□□□ -0.24
RBM23-233ENST00000557667 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
RBM23-233ENST00000557667 ABCC8Q09428 1581 aa13.46□□□□□ -0.25
RBM23-233ENST00000557667 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.25
RBM23-233ENST00000557667 CFTRP13569 1480 aa13.44□□□□□ -0.26
RBM23-233ENST00000557667 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
RBM23-233ENST00000557667 KIF21BO75037 1637 aa13.41□□□□□ -0.26
RBM23-233ENST00000557667 CEP164Q9UPV0 1460 aa13.41□□□□□ -0.26
RBM23-233ENST00000557667 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
RBM23-233ENST00000557667 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
RBM23-233ENST00000557667 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
RBM23-233ENST00000557667 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
RBM23-233ENST00000557667 CADPSQ9ULU8 1353 aa13.34□□□□□ -0.27
RBM23-233ENST00000557667 LAMC3Q9Y6N6 1575 aa13.34□□□□□ -0.27
RBM23-233ENST00000557667 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
RBM23-233ENST00000557667 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
RBM23-233ENST00000557667 ZEB1P37275 1124 aaPredicted RBP13.3□□□□□ -0.28
RBM23-233ENST00000557667 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
RBM23-233ENST00000557667 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
RBM23-233ENST00000557667 SYNJ1O43426 1573 aa13.25□□□□□ -0.29
RBM23-233ENST00000557667 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
RBM23-233ENST00000557667 PDS5BQ9NTI5 1447 aa13.23□□□□□ -0.29
RBM23-233ENST00000557667 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
RBM23-233ENST00000557667 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
RBM23-233ENST00000557667 CUX1P39880 1505 aa13.14□□□□□ -0.31
RBM23-233ENST00000557667 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
RBM23-233ENST00000557667 CUL7Q14999 1698 aa13.13□□□□□ -0.31
RBM23-233ENST00000557667 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
RBM23-233ENST00000557667 APLP2Q06481 763 aa13.1□□□□□ -0.31
RBM23-233ENST00000557667 SOGA1O94964 1423 aa13.09□□□□□ -0.31
RBM23-233ENST00000557667 LOC105371045A0A1W2PR82 267 aa13.09□□□□□ -0.31
RBM23-233ENST00000557667 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.32
RBM23-233ENST00000557667 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
RBM23-233ENST00000557667 FAM9AQ8IZU1 332 aaPredicted RBP13.06□□□□□ -0.32
RBM23-233ENST00000557667 CLIP1P30622 1438 aa13.06□□□□□ -0.32
RBM23-233ENST00000557667 RAPGEF2Q9Y4G8 1499 aa13.04□□□□□ -0.32
RBM23-233ENST00000557667 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
RBM23-233ENST00000557667 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
RBM23-233ENST00000557667 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
RBM23-233ENST00000557667 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
RBM23-233ENST00000557667 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
RBM23-233ENST00000557667 HRCP23327 699 aa13□□□□□ -0.33
RBM23-233ENST00000557667 CUX2O14529 1486 aa12.99□□□□□ -0.33
RBM23-233ENST00000557667 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
RBM23-233ENST00000557667 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
RBM23-233ENST00000557667 MRC2Q9UBG0 1479 aa12.97□□□□□ -0.33
RBM23-233ENST00000557667 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
RBM23-233ENST00000557667 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
RBM23-233ENST00000557667 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
RBM23-233ENST00000557667 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
RBM23-233ENST00000557667 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.343e-7■■■■■ 34.6
RBM23-233ENST00000557667 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
RBM23-233ENST00000557667 IGF1RP08069 1367 aa12.89□□□□□ -0.35
RBM23-233ENST00000557667 THOC2Q8NI27 1593 aaKnown RBP12.89□□□□□ -0.35
RBM23-233ENST00000557667 ABCA5Q8WWZ7 1642 aa12.89□□□□□ -0.35
RBM23-233ENST00000557667 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
RBM23-233ENST00000557667 CTTNBP2Q8WZ74 1663 aa12.87□□□□□ -0.35
RBM23-233ENST00000557667 WDR62O43379 1518 aa12.87□□□□□ -0.35
RBM23-233ENST00000557667 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
RBM23-233ENST00000557667 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
RBM23-233ENST00000557667 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
RBM23-233ENST00000557667 CLSPNQ9HAW4 1339 aa12.83□□□□□ -0.36
RBM23-233ENST00000557667 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
RBM23-233ENST00000557667 FYCO1Q9BQS8 1478 aa12.81□□□□□ -0.36
RBM23-233ENST00000557667 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
RBM23-233ENST00000557667 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms