RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-215ENST00000556839 AEBP2Q6ZN18 517 aaPredicted RBP33.17■■■□□ 2.9
RALGAPA1-215ENST00000556839 CHIC1Q5VXU3 224 aa31.47■■■□□ 2.63
RALGAPA1-215ENST00000556839 SENP3Q9H4L4 574 aaPredicted RBP28.39■■■□□ 2.13
RALGAPA1-215ENST00000556839 PHF23Q9BUL5 403 aaPredicted RBP27.97■■■□□ 2.07
RALGAPA1-215ENST00000556839 FOXD1Q16676 465 aa26.42■■□□□ 1.82
RALGAPA1-215ENST00000556839 PLPPR3Q6T4P5 718 aa25.15■■□□□ 1.62
RALGAPA1-215ENST00000556839 POTEDQ86YR6 584 aa25.11■■□□□ 1.61
RALGAPA1-215ENST00000556839 MSH5O43196 834 aa24.82■■□□□ 1.56
RALGAPA1-215ENST00000556839 PIAS4Q8N2W9 510 aaPredicted RBP24.74■■□□□ 1.55
RALGAPA1-215ENST00000556839 PPP6R1Q9UPN7 881 aa24.61■■□□□ 1.53
RALGAPA1-215ENST00000556839 ADRA2BP18089 450 aa24.57■■□□□ 1.52
RALGAPA1-215ENST00000556839 MAPK8IP2Q13387 824 aaPredicted RBP22.56■■□□□ 1.2
RALGAPA1-215ENST00000556839 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
RALGAPA1-215ENST00000556839 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
RALGAPA1-215ENST00000556839 PPP4R3CPQ6ZMV5 832 aa22.02■■□□□ 1.12
RALGAPA1-215ENST00000556839 DCAF8L1A6NGE4 600 aa21.64■■□□□ 1.05
RALGAPA1-215ENST00000556839 CNKSR2Q8WXI2 1034 aa21.63■■□□□ 1.05
RALGAPA1-215ENST00000556839 CACNB1Q02641 598 aaPredicted RBP21.62■■□□□ 1.05
RALGAPA1-215ENST00000556839 HOXD11P31277 338 aaPredicted RBP21.6■■□□□ 1.05
RALGAPA1-215ENST00000556839 RNF216Q9NWF9 866 aaPredicted RBP21.44■■□□□ 1.02
RALGAPA1-215ENST00000556839 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
RALGAPA1-215ENST00000556839 RNF39Q9H2S5 420 aa21.12■□□□□ 0.97
RALGAPA1-215ENST00000556839 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
RALGAPA1-215ENST00000556839 NPM3O75607 178 aaKnown RBP20.83■□□□□ 0.93
RALGAPA1-215ENST00000556839 C1QBPQ07021 282 aaKnown RBP20.83■□□□□ 0.93
RALGAPA1-215ENST00000556839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.896e-8■□□□□ 9.5
RALGAPA1-215ENST00000556839 KCNA4P22459 653 aa20.36■□□□□ 0.85
RALGAPA1-215ENST00000556839 U3KPZ7 1027 aaPredicted RBP20.16■□□□□ 0.82
RALGAPA1-215ENST00000556839 CAPN15O75808 1086 aa19.92■□□□□ 0.78
RALGAPA1-215ENST00000556839 SPINK5Q9NQ38 1064 aaPredicted RBP19.89■□□□□ 0.77
RALGAPA1-215ENST00000556839 SLC4A2P04920 1241 aa19.88■□□□□ 0.77
RALGAPA1-215ENST00000556839 DSG3P32926 999 aa19.76■□□□□ 0.75
RALGAPA1-215ENST00000556839 APLP2Q06481 763 aa19.68■□□□□ 0.74
RALGAPA1-215ENST00000556839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.62■□□□□ 0.73
RALGAPA1-215ENST00000556839 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
RALGAPA1-215ENST00000556839 POTEHQ6S545 545 aa19.6■□□□□ 0.73
RALGAPA1-215ENST00000556839 TRHP20396 242 aaPredicted RBP19.57■□□□□ 0.72
RALGAPA1-215ENST00000556839 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
RALGAPA1-215ENST00000556839 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
RALGAPA1-215ENST00000556839 ABCB7O75027 752 aa19.44■□□□□ 0.7
RALGAPA1-215ENST00000556839 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
RALGAPA1-215ENST00000556839 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
RALGAPA1-215ENST00000556839 FOXD4L1Q9NU39 408 aa19.05■□□□□ 0.64
RALGAPA1-215ENST00000556839 POLA2Q14181 598 aa19■□□□□ 0.63
RALGAPA1-215ENST00000556839 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
RALGAPA1-215ENST00000556839 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
RALGAPA1-215ENST00000556839 ZBTB22O15209 634 aa18.69■□□□□ 0.58
RALGAPA1-215ENST00000556839 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
RALGAPA1-215ENST00000556839 CHRDL2Q6WN34 429 aa18.5■□□□□ 0.55
RALGAPA1-215ENST00000556839 ATXN8OSP0DMR3 200 aa18.47■□□□□ 0.55
RALGAPA1-215ENST00000556839 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
RALGAPA1-215ENST00000556839 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
RALGAPA1-215ENST00000556839 REM2Q8IYK8 340 aaPredicted RBP18.23■□□□□ 0.51
RALGAPA1-215ENST00000556839 FBLN2P98095 1184 aa18.18■□□□□ 0.5
RALGAPA1-215ENST00000556839 SP7Q8TDD2 431 aaPredicted RBP18.08■□□□□ 0.49
RALGAPA1-215ENST00000556839 PITPNM1O00562 1244 aa18.07■□□□□ 0.48
RALGAPA1-215ENST00000556839 SPDYE2BA6NHP3 402 aa18.04■□□□□ 0.48
RALGAPA1-215ENST00000556839 SPDYE6P0CI01 402 aa18.04■□□□□ 0.48
RALGAPA1-215ENST00000556839 SPDYE2Q495Y8 402 aa18.04■□□□□ 0.48
RALGAPA1-215ENST00000556839 PIP4P2Q8N4L2 257 aa18.03■□□□□ 0.48
RALGAPA1-215ENST00000556839 MKRN4PQ13434 485 aaPredicted RBP17.94■□□□□ 0.46
RALGAPA1-215ENST00000556839 FXR2P51116 673 aaKnown RBP eCLIP17.9■□□□□ 0.46
RALGAPA1-215ENST00000556839 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
RALGAPA1-215ENST00000556839 HAX1O00165 279 aa17.77■□□□□ 0.44
RALGAPA1-215ENST00000556839 SPDYE1Q8NFV5 336 aaPredicted RBP17.76■□□□□ 0.43
RALGAPA1-215ENST00000556839 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
RALGAPA1-215ENST00000556839 SSUH2Q9Y2M2 353 aa17.76■□□□□ 0.43
RALGAPA1-215ENST00000556839 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
RALGAPA1-215ENST00000556839 PRKAR2AP13861 404 aaKnown RBP17.61■□□□□ 0.41
RALGAPA1-215ENST00000556839 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
RALGAPA1-215ENST00000556839 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
RALGAPA1-215ENST00000556839 EVX2Q03828 476 aa17.45■□□□□ 0.38
RALGAPA1-215ENST00000556839 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
RALGAPA1-215ENST00000556839 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
RALGAPA1-215ENST00000556839 C19orf67A6NJJ6 358 aa17.33■□□□□ 0.36
RALGAPA1-215ENST00000556839 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
RALGAPA1-215ENST00000556839 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
RALGAPA1-215ENST00000556839 GABBR2O75899 941 aa17.1■□□□□ 0.33
RALGAPA1-215ENST00000556839 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
RALGAPA1-215ENST00000556839 CD44P16070 742 aaKnown RBP17.06■□□□□ 0.32
RALGAPA1-215ENST00000556839 LHX8Q68G74 356 aa16.95■□□□□ 0.3
RALGAPA1-215ENST00000556839 CREBZFQ9NS37 354 aa16.94■□□□□ 0.3
RALGAPA1-215ENST00000556839 CLCN6P51797 869 aa16.84■□□□□ 0.29
RALGAPA1-215ENST00000556839 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
RALGAPA1-215ENST00000556839 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
RALGAPA1-215ENST00000556839 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
RALGAPA1-215ENST00000556839 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
RALGAPA1-215ENST00000556839 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
RALGAPA1-215ENST00000556839 DCBLD2Q96PD2 775 aa16.69■□□□□ 0.26
RALGAPA1-215ENST00000556839 PROM2Q8N271 834 aa16.62■□□□□ 0.25
RALGAPA1-215ENST00000556839 MNX1P50219 401 aaPredicted RBP16.61■□□□□ 0.25
RALGAPA1-215ENST00000556839 GALR2O43603 387 aaPredicted RBP16.57■□□□□ 0.24
RALGAPA1-215ENST00000556839 PHF12Q96QT6 1004 aa16.54■□□□□ 0.24
RALGAPA1-215ENST00000556839 PLSCR2Q9NRY7 297 aa16.5■□□□□ 0.23
RALGAPA1-215ENST00000556839 PLEKHG5O94827 1062 aa16.41■□□□□ 0.22
RALGAPA1-215ENST00000556839 TSPYL2Q9H2G4 693 aaPredicted RBP16.37■□□□□ 0.21
RALGAPA1-215ENST00000556839 MIER1Q8N108 512 aa16.35■□□□□ 0.21
RALGAPA1-215ENST00000556839 MS4A3Q96HJ5 214 aa16.32■□□□□ 0.2
RALGAPA1-215ENST00000556839 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
RALGAPA1-215ENST00000556839 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms