RNA–Protein interactions for RNA: ENST00000556459.1

PAPOLA-220, Transcript of poly(A) polymerase alpha, humanhuman

TSL 5

Gene PAPOLA, Length 959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-220ENST00000556459 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
PAPOLA-220ENST00000556459 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
PAPOLA-220ENST00000556459 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
PAPOLA-220ENST00000556459 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
PAPOLA-220ENST00000556459 FOXD1Q16676 465 aa20.9■□□□□ 0.94
PAPOLA-220ENST00000556459 PLPPR3Q6T4P5 718 aa20.11■□□□□ 0.81
PAPOLA-220ENST00000556459 MSH5O43196 834 aa19.77■□□□□ 0.76
PAPOLA-220ENST00000556459 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
PAPOLA-220ENST00000556459 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
PAPOLA-220ENST00000556459 ADRA2BP18089 450 aa19.42■□□□□ 0.7
PAPOLA-220ENST00000556459 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
PAPOLA-220ENST00000556459 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
PAPOLA-220ENST00000556459 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
PAPOLA-220ENST00000556459 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
PAPOLA-220ENST00000556459 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
PAPOLA-220ENST00000556459 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
PAPOLA-220ENST00000556459 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
PAPOLA-220ENST00000556459 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
PAPOLA-220ENST00000556459 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
PAPOLA-220ENST00000556459 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
PAPOLA-220ENST00000556459 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
PAPOLA-220ENST00000556459 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
PAPOLA-220ENST00000556459 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
PAPOLA-220ENST00000556459 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
PAPOLA-220ENST00000556459 KCNA4P22459 653 aa16.74■□□□□ 0.27
PAPOLA-220ENST00000556459 C1QBPQ07021 282 aaKnown RBP16.62■□□□□ 0.25
PAPOLA-220ENST00000556459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■□□□□ 8.6
PAPOLA-220ENST00000556459 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
PAPOLA-220ENST00000556459 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
PAPOLA-220ENST00000556459 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
PAPOLA-220ENST00000556459 APLP2Q06481 763 aa15.82■□□□□ 0.12
PAPOLA-220ENST00000556459 CAPN15O75808 1086 aa15.76■□□□□ 0.11
PAPOLA-220ENST00000556459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
PAPOLA-220ENST00000556459 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
PAPOLA-220ENST00000556459 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
PAPOLA-220ENST00000556459 DSG3P32926 999 aa15.66■□□□□ 0.1
PAPOLA-220ENST00000556459 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
PAPOLA-220ENST00000556459 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
PAPOLA-220ENST00000556459 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
PAPOLA-220ENST00000556459 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
PAPOLA-220ENST00000556459 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
PAPOLA-220ENST00000556459 ABCB7O75027 752 aa15.33■□□□□ 0.04
PAPOLA-220ENST00000556459 ZBTB22O15209 634 aa15.3■□□□□ 0.04
PAPOLA-220ENST00000556459 POLA2Q14181 598 aa15.12■□□□□ 0.01
PAPOLA-220ENST00000556459 RBM42Q9BTD8 480 aaKnown RBP15.12■□□□□ 0.01
PAPOLA-220ENST00000556459 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
PAPOLA-220ENST00000556459 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
PAPOLA-220ENST00000556459 POTEHQ6S545 545 aa15.05■□□□□ -0
PAPOLA-220ENST00000556459 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
PAPOLA-220ENST00000556459 ZBTB12Q9Y330 459 aaPredicted RBP14.97□□□□□ -0.01
PAPOLA-220ENST00000556459 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
PAPOLA-220ENST00000556459 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
PAPOLA-220ENST00000556459 FBLN2P98095 1184 aa14.68□□□□□ -0.06
PAPOLA-220ENST00000556459 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
PAPOLA-220ENST00000556459 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
PAPOLA-220ENST00000556459 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
PAPOLA-220ENST00000556459 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
PAPOLA-220ENST00000556459 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
PAPOLA-220ENST00000556459 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
PAPOLA-220ENST00000556459 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
PAPOLA-220ENST00000556459 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
PAPOLA-220ENST00000556459 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
PAPOLA-220ENST00000556459 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
PAPOLA-220ENST00000556459 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
PAPOLA-220ENST00000556459 SPDYE1Q8NFV5 336 aaPredicted RBP14.17□□□□□ -0.14
PAPOLA-220ENST00000556459 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
PAPOLA-220ENST00000556459 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
PAPOLA-220ENST00000556459 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
PAPOLA-220ENST00000556459 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
PAPOLA-220ENST00000556459 HAX1O00165 279 aa14.04□□□□□ -0.16
PAPOLA-220ENST00000556459 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
PAPOLA-220ENST00000556459 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
PAPOLA-220ENST00000556459 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
PAPOLA-220ENST00000556459 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
PAPOLA-220ENST00000556459 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
PAPOLA-220ENST00000556459 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
PAPOLA-220ENST00000556459 EVX2Q03828 476 aa13.7□□□□□ -0.22
PAPOLA-220ENST00000556459 FKBP8Q14318 412 aa13.65□□□□□ -0.22
PAPOLA-220ENST00000556459 CLCN6P51797 869 aa13.59□□□□□ -0.23
PAPOLA-220ENST00000556459 FARP1Q9Y4F1 1045 aaPredicted RBP13.59□□□□□ -0.23
PAPOLA-220ENST00000556459 GABBR2O75899 941 aa13.53□□□□□ -0.24
PAPOLA-220ENST00000556459 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
PAPOLA-220ENST00000556459 PROM2Q8N271 834 aa13.51□□□□□ -0.25
PAPOLA-220ENST00000556459 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
PAPOLA-220ENST00000556459 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
PAPOLA-220ENST00000556459 NPM1P06748 294 aaKnown RBP eCLIP13.42□□□□□ -0.26
PAPOLA-220ENST00000556459 MIER1Q8N108 512 aa13.42□□□□□ -0.26
PAPOLA-220ENST00000556459 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
PAPOLA-220ENST00000556459 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
PAPOLA-220ENST00000556459 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
PAPOLA-220ENST00000556459 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
PAPOLA-220ENST00000556459 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
PAPOLA-220ENST00000556459 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
PAPOLA-220ENST00000556459 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
PAPOLA-220ENST00000556459 LHX8Q68G74 356 aa13.23□□□□□ -0.29
PAPOLA-220ENST00000556459 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
PAPOLA-220ENST00000556459 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
PAPOLA-220ENST00000556459 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
PAPOLA-220ENST00000556459 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
PAPOLA-220ENST00000556459 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms