RNA–Protein interactions for RNA: ENST00000556402.5

ETFRF1-208, Transcript of electron transfer flavoprotein regulatory factor 1, humanhuman

TSL 3 BASIC

Gene ETFRF1, Length 874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFRF1-208ENST00000556402 AEBP2Q6ZN18 517 aaPredicted RBP34.15■■■■□ 3.06
ETFRF1-208ENST00000556402 CHIC1Q5VXU3 224 aa32.27■■■□□ 2.76
ETFRF1-208ENST00000556402 SENP3Q9H4L4 574 aaPredicted RBP28.92■■■□□ 2.22
ETFRF1-208ENST00000556402 PHF23Q9BUL5 403 aaPredicted RBP28.64■■■□□ 2.18
ETFRF1-208ENST00000556402 FOXD1Q16676 465 aa27.1■■□□□ 1.93
ETFRF1-208ENST00000556402 PLPPR3Q6T4P5 718 aa25.68■■□□□ 1.7
ETFRF1-208ENST00000556402 PPP6R1Q9UPN7 881 aa25.39■■□□□ 1.66
ETFRF1-208ENST00000556402 ADRA2BP18089 450 aa25.27■■□□□ 1.64
ETFRF1-208ENST00000556402 PIAS4Q8N2W9 510 aaPredicted RBP25.25■■□□□ 1.63
ETFRF1-208ENST00000556402 MSH5O43196 834 aa25.21■■□□□ 1.63
ETFRF1-208ENST00000556402 POTEDQ86YR6 584 aa24.81■■□□□ 1.56
ETFRF1-208ENST00000556402 MAPK8IP2Q13387 824 aaPredicted RBP23.26■■□□□ 1.31
ETFRF1-208ENST00000556402 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
ETFRF1-208ENST00000556402 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
ETFRF1-208ENST00000556402 PPP4R3CPQ6ZMV5 832 aa22.58■■□□□ 1.21
ETFRF1-208ENST00000556402 HOXD11P31277 338 aaPredicted RBP22.13■■□□□ 1.13
ETFRF1-208ENST00000556402 CNKSR2Q8WXI2 1034 aa22.1■■□□□ 1.13
ETFRF1-208ENST00000556402 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
ETFRF1-208ENST00000556402 RNF216Q9NWF9 866 aaPredicted RBP21.92■■□□□ 1.1
ETFRF1-208ENST00000556402 CACNB1Q02641 598 aaPredicted RBP21.7■■□□□ 1.06
ETFRF1-208ENST00000556402 RNF39Q9H2S5 420 aa21.6■■□□□ 1.05
ETFRF1-208ENST00000556402 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
ETFRF1-208ENST00000556402 NPM3O75607 178 aaKnown RBP21.43■■□□□ 1.02
ETFRF1-208ENST00000556402 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
ETFRF1-208ENST00000556402 C1QBPQ07021 282 aaKnown RBP21.19■□□□□ 0.98
ETFRF1-208ENST00000556402 KCNA4P22459 653 aa21.04■□□□□ 0.96
ETFRF1-208ENST00000556402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.04■□□□□ 0.96
ETFRF1-208ENST00000556402 U3KPZ7 1027 aaPredicted RBP20.7■□□□□ 0.9
ETFRF1-208ENST00000556402 SLC4A2P04920 1241 aa20.53■□□□□ 0.88
ETFRF1-208ENST00000556402 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
ETFRF1-208ENST00000556402 CAPN15O75808 1086 aa20.3■□□□□ 0.84
ETFRF1-208ENST00000556402 DSG3P32926 999 aa20.24■□□□□ 0.83
ETFRF1-208ENST00000556402 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
ETFRF1-208ENST00000556402 ABCB7O75027 752 aa19.91■□□□□ 0.78
ETFRF1-208ENST00000556402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
ETFRF1-208ENST00000556402 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
ETFRF1-208ENST00000556402 ZNF219Q9P2Y4 722 aaPredicted RBP19.85■□□□□ 0.77
ETFRF1-208ENST00000556402 APLP2Q06481 763 aa19.83■□□□□ 0.77
ETFRF1-208ENST00000556402 SAMD1Q6SPF0 538 aaPredicted RBP19.82■□□□□ 0.76
ETFRF1-208ENST00000556402 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
ETFRF1-208ENST00000556402 MYCNP04198 464 aaPredicted RBP19.72■□□□□ 0.75
ETFRF1-208ENST00000556402 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
ETFRF1-208ENST00000556402 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
ETFRF1-208ENST00000556402 POLA2Q14181 598 aa19.46■□□□□ 0.71
ETFRF1-208ENST00000556402 ZBTB22O15209 634 aa19.42■□□□□ 0.7
ETFRF1-208ENST00000556402 POTEHQ6S545 545 aa19.39■□□□□ 0.69
ETFRF1-208ENST00000556402 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
ETFRF1-208ENST00000556402 ZBTB12Q9Y330 459 aaPredicted RBP18.89■□□□□ 0.61
ETFRF1-208ENST00000556402 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
ETFRF1-208ENST00000556402 ATXN8OSP0DMR3 200 aa18.86■□□□□ 0.61
ETFRF1-208ENST00000556402 CHRDL2Q6WN34 429 aa18.86■□□□□ 0.61
ETFRF1-208ENST00000556402 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
ETFRF1-208ENST00000556402 AKT1S1Q96B36 256 aa18.77■□□□□ 0.6
ETFRF1-208ENST00000556402 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
ETFRF1-208ENST00000556402 REM2Q8IYK8 340 aaPredicted RBP18.66■□□□□ 0.58
ETFRF1-208ENST00000556402 MKRN4PQ13434 485 aaPredicted RBP18.54■□□□□ 0.56
ETFRF1-208ENST00000556402 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
ETFRF1-208ENST00000556402 FBLN2P98095 1184 aa18.46■□□□□ 0.55
ETFRF1-208ENST00000556402 PIP4P2Q8N4L2 257 aa18.45■□□□□ 0.54
ETFRF1-208ENST00000556402 SPDYE2BA6NHP3 402 aa18.38■□□□□ 0.53
ETFRF1-208ENST00000556402 SPDYE6P0CI01 402 aa18.38■□□□□ 0.53
ETFRF1-208ENST00000556402 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
ETFRF1-208ENST00000556402 FXR2P51116 673 aaKnown RBP eCLIP18.31■□□□□ 0.52
ETFRF1-208ENST00000556402 SSUH2Q9Y2M2 353 aa18.21■□□□□ 0.51
ETFRF1-208ENST00000556402 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
ETFRF1-208ENST00000556402 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
ETFRF1-208ENST00000556402 CLEC11AQ9Y240 323 aa18.1■□□□□ 0.49
ETFRF1-208ENST00000556402 HAX1O00165 279 aa18.06■□□□□ 0.48
ETFRF1-208ENST00000556402 SPDYE1Q8NFV5 336 aaPredicted RBP18.06■□□□□ 0.48
ETFRF1-208ENST00000556402 EVX2Q03828 476 aa18.01■□□□□ 0.47
ETFRF1-208ENST00000556402 PRKAR2AP13861 404 aaKnown RBP17.98■□□□□ 0.47
ETFRF1-208ENST00000556402 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
ETFRF1-208ENST00000556402 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
ETFRF1-208ENST00000556402 PRR29P0C7W0 189 aa17.75■□□□□ 0.43
ETFRF1-208ENST00000556402 C19orf67A6NJJ6 358 aa17.73■□□□□ 0.43
ETFRF1-208ENST00000556402 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
ETFRF1-208ENST00000556402 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
ETFRF1-208ENST00000556402 GABBR2O75899 941 aa17.48■□□□□ 0.39
ETFRF1-208ENST00000556402 CREBZFQ9NS37 354 aa17.41■□□□□ 0.38
ETFRF1-208ENST00000556402 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
ETFRF1-208ENST00000556402 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
ETFRF1-208ENST00000556402 POTEIP0CG38 1075 aa17.2■□□□□ 0.34
ETFRF1-208ENST00000556402 PROM2Q8N271 834 aa17.15■□□□□ 0.34
ETFRF1-208ENST00000556402 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
ETFRF1-208ENST00000556402 MNX1P50219 401 aaPredicted RBP17.13■□□□□ 0.33
ETFRF1-208ENST00000556402 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
ETFRF1-208ENST00000556402 LHX8Q68G74 356 aa17.02■□□□□ 0.32
ETFRF1-208ENST00000556402 GALR2O43603 387 aaPredicted RBP17■□□□□ 0.31
ETFRF1-208ENST00000556402 FKBP8Q14318 412 aa17■□□□□ 0.31
ETFRF1-208ENST00000556402 PHF12Q96QT6 1004 aa16.99■□□□□ 0.31
ETFRF1-208ENST00000556402 CLCN6P51797 869 aa16.97■□□□□ 0.31
ETFRF1-208ENST00000556402 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
ETFRF1-208ENST00000556402 DCBLD2Q96PD2 775 aa16.91■□□□□ 0.3
ETFRF1-208ENST00000556402 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
ETFRF1-208ENST00000556402 TSPYL2Q9H2G4 693 aaPredicted RBP16.75■□□□□ 0.27
ETFRF1-208ENST00000556402 MS4A3Q96HJ5 214 aa16.73■□□□□ 0.27
ETFRF1-208ENST00000556402 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
ETFRF1-208ENST00000556402 MIER1Q8N108 512 aa16.7■□□□□ 0.26
ETFRF1-208ENST00000556402 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
ETFRF1-208ENST00000556402 POTEB2H3BUK9 544 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms