RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 AEBP2Q6ZN18 517 aaPredicted RBP25.36■■□□□ 1.65
SUPT16H-204ENST00000555943 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
SUPT16H-204ENST00000555943 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
SUPT16H-204ENST00000555943 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
SUPT16H-204ENST00000555943 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
SUPT16H-204ENST00000555943 FOXD1Q16676 465 aa19.87■□□□□ 0.77
SUPT16H-204ENST00000555943 ADRA2BP18089 450 aa19.41■□□□□ 0.7
SUPT16H-204ENST00000555943 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
SUPT16H-204ENST00000555943 PIAS4Q8N2W9 510 aaPredicted RBP18.8■□□□□ 0.6
SUPT16H-204ENST00000555943 MSH5O43196 834 aa18.14■□□□□ 0.49
SUPT16H-204ENST00000555943 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
SUPT16H-204ENST00000555943 KCNA4P22459 653 aa18.11■□□□□ 0.49
SUPT16H-204ENST00000555943 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
SUPT16H-204ENST00000555943 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
SUPT16H-204ENST00000555943 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
SUPT16H-204ENST00000555943 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
SUPT16H-204ENST00000555943 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
SUPT16H-204ENST00000555943 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
SUPT16H-204ENST00000555943 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-204ENST00000555943 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
SUPT16H-204ENST00000555943 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
SUPT16H-204ENST00000555943 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
SUPT16H-204ENST00000555943 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
SUPT16H-204ENST00000555943 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
SUPT16H-204ENST00000555943 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
SUPT16H-204ENST00000555943 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
SUPT16H-204ENST00000555943 ZBTB22O15209 634 aa16.68■□□□□ 0.26
SUPT16H-204ENST00000555943 FOXD4L1Q9NU39 408 aa16.53■□□□□ 0.24
SUPT16H-204ENST00000555943 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
SUPT16H-204ENST00000555943 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
SUPT16H-204ENST00000555943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.178e-12■■■■□ 19.4
SUPT16H-204ENST00000555943 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
SUPT16H-204ENST00000555943 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
SUPT16H-204ENST00000555943 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
SUPT16H-204ENST00000555943 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
SUPT16H-204ENST00000555943 ABCC9O60706 1549 aa15.85■□□□□ 0.13
SUPT16H-204ENST00000555943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
SUPT16H-204ENST00000555943 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
SUPT16H-204ENST00000555943 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
SUPT16H-204ENST00000555943 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
SUPT16H-204ENST00000555943 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
SUPT16H-204ENST00000555943 APLP2Q06481 763 aa15.54■□□□□ 0.08
SUPT16H-204ENST00000555943 C1QBPQ07021 282 aaKnown RBP15.41■□□□□ 0.06
SUPT16H-204ENST00000555943 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
SUPT16H-204ENST00000555943 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
SUPT16H-204ENST00000555943 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
SUPT16H-204ENST00000555943 CAPN15O75808 1086 aa15.3■□□□□ 0.04
SUPT16H-204ENST00000555943 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
SUPT16H-204ENST00000555943 FKBP8Q14318 412 aa15.19■□□□□ 0.02
SUPT16H-204ENST00000555943 POLA2Q14181 598 aa15.14■□□□□ 0.01
SUPT16H-204ENST00000555943 NACADO15069 1562 aa15.11■□□□□ 0.01
SUPT16H-204ENST00000555943 ABCB7O75027 752 aa15.06■□□□□ 0
SUPT16H-204ENST00000555943 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
SUPT16H-204ENST00000555943 DSG3P32926 999 aa14.97□□□□□ -0.01
SUPT16H-204ENST00000555943 FBLN2P98095 1184 aa14.97□□□□□ -0.01
SUPT16H-204ENST00000555943 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
SUPT16H-204ENST00000555943 CACNB1Q02641 598 aaPredicted RBP14.94□□□□□ -0.02
SUPT16H-204ENST00000555943 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
SUPT16H-204ENST00000555943 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
SUPT16H-204ENST00000555943 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
SUPT16H-204ENST00000555943 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
SUPT16H-204ENST00000555943 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
SUPT16H-204ENST00000555943 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
SUPT16H-204ENST00000555943 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
SUPT16H-204ENST00000555943 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
SUPT16H-204ENST00000555943 PROM2Q8N271 834 aa14.66□□□□□ -0.06
SUPT16H-204ENST00000555943 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
SUPT16H-204ENST00000555943 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
SUPT16H-204ENST00000555943 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
SUPT16H-204ENST00000555943 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
SUPT16H-204ENST00000555943 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
SUPT16H-204ENST00000555943 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
SUPT16H-204ENST00000555943 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
SUPT16H-204ENST00000555943 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
SUPT16H-204ENST00000555943 SSUH2Q9Y2M2 353 aa14.47□□□□□ -0.09
SUPT16H-204ENST00000555943 RTN4Q9NQC3 1192 aaKnown RBP14.43□□□□□ -0.1
SUPT16H-204ENST00000555943 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
SUPT16H-204ENST00000555943 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
SUPT16H-204ENST00000555943 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
SUPT16H-204ENST00000555943 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-204ENST00000555943 CECR2Q9BXF3 1484 aa14.33□□□□□ -0.12
SUPT16H-204ENST00000555943 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-204ENST00000555943 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
SUPT16H-204ENST00000555943 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
SUPT16H-204ENST00000555943 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
SUPT16H-204ENST00000555943 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
SUPT16H-204ENST00000555943 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
SUPT16H-204ENST00000555943 MIER1Q8N108 512 aa14.03□□□□□ -0.16
SUPT16H-204ENST00000555943 REM2Q8IYK8 340 aaPredicted RBP14.02□□□□□ -0.17
SUPT16H-204ENST00000555943 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
SUPT16H-204ENST00000555943 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
SUPT16H-204ENST00000555943 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
SUPT16H-204ENST00000555943 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
SUPT16H-204ENST00000555943 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
SUPT16H-204ENST00000555943 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
SUPT16H-204ENST00000555943 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
SUPT16H-204ENST00000555943 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
SUPT16H-204ENST00000555943 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
SUPT16H-204ENST00000555943 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
SUPT16H-204ENST00000555943 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms