RNA–Protein interactions for RNA: ENST00000555787.1

PSMC1-206, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 2,246 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-206ENST00000555787 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
PSMC1-206ENST00000555787 AEBP2Q6ZN18 517 aaPredicted RBP20.89■□□□□ 0.93
PSMC1-206ENST00000555787 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
PSMC1-206ENST00000555787 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
PSMC1-206ENST00000555787 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
PSMC1-206ENST00000555787 KCNA4P22459 653 aa17.34■□□□□ 0.37
PSMC1-206ENST00000555787 ADRA2BP18089 450 aa17.06■□□□□ 0.32
PSMC1-206ENST00000555787 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
PSMC1-206ENST00000555787 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
PSMC1-206ENST00000555787 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
PSMC1-206ENST00000555787 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
PSMC1-206ENST00000555787 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
PSMC1-206ENST00000555787 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
PSMC1-206ENST00000555787 ZBTB22O15209 634 aa16.11■□□□□ 0.17
PSMC1-206ENST00000555787 FOXD1Q16676 465 aa15.99■□□□□ 0.15
PSMC1-206ENST00000555787 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
PSMC1-206ENST00000555787 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
PSMC1-206ENST00000555787 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
PSMC1-206ENST00000555787 NISCHQ9Y2I1 1504 aa15.67■□□□□ 0.1
PSMC1-206ENST00000555787 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
PSMC1-206ENST00000555787 PIAS4Q8N2W9 510 aaPredicted RBP15.31■□□□□ 0.04
PSMC1-206ENST00000555787 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
PSMC1-206ENST00000555787 FKBP8Q14318 412 aa15.24■□□□□ 0.03
PSMC1-206ENST00000555787 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
PSMC1-206ENST00000555787 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
PSMC1-206ENST00000555787 PLCB2Q00722 1185 aa14.84□□□□□ -0.03
PSMC1-206ENST00000555787 TAOK2Q9UL54 1235 aa14.77□□□□□ -0.04
PSMC1-206ENST00000555787 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
PSMC1-206ENST00000555787 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
PSMC1-206ENST00000555787 BCANQ96GW7 911 aa14.64□□□□□ -0.07
PSMC1-206ENST00000555787 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
PSMC1-206ENST00000555787 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
PSMC1-206ENST00000555787 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
PSMC1-206ENST00000555787 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
PSMC1-206ENST00000555787 TIMELESSQ9UNS1 1208 aa14.48□□□□□ -0.09
PSMC1-206ENST00000555787 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.1
PSMC1-206ENST00000555787 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
PSMC1-206ENST00000555787 KDM2AQ9Y2K7 1162 aa14.38□□□□□ -0.11
PSMC1-206ENST00000555787 FBLN2P98095 1184 aa14.35□□□□□ -0.11
PSMC1-206ENST00000555787 TULP1O00294 542 aaPredicted RBP14.33□□□□□ -0.12
PSMC1-206ENST00000555787 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
PSMC1-206ENST00000555787 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
PSMC1-206ENST00000555787 DAXXQ9UER7 740 aaPredicted RBP14.27□□□□□ -0.12
PSMC1-206ENST00000555787 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
PSMC1-206ENST00000555787 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
PSMC1-206ENST00000555787 PKD2Q13563 968 aa14.07□□□□□ -0.16
PSMC1-206ENST00000555787 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
PSMC1-206ENST00000555787 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
PSMC1-206ENST00000555787 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
PSMC1-206ENST00000555787 MSH5O43196 834 aa14□□□□□ -0.17
PSMC1-206ENST00000555787 CFAP44Q96MT7 982 aa14□□□□□ -0.17
PSMC1-206ENST00000555787 PAXIP1Q6ZW49 1069 aaPredicted RBP13.99□□□□□ -0.17
PSMC1-206ENST00000555787 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
PSMC1-206ENST00000555787 GTF3C3Q9Y5Q9 886 aa13.98□□□□□ -0.17
PSMC1-206ENST00000555787 ARXQ96QS3 562 aa13.96□□□□□ -0.17
PSMC1-206ENST00000555787 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
PSMC1-206ENST00000555787 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
PSMC1-206ENST00000555787 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
PSMC1-206ENST00000555787 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
PSMC1-206ENST00000555787 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
PSMC1-206ENST00000555787 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
PSMC1-206ENST00000555787 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
PSMC1-206ENST00000555787 BBXQ8WY36 941 aaPredicted RBP13.76□□□□□ -0.21
PSMC1-206ENST00000555787 TMEM132AQ24JP5 1023 aa13.68□□□□□ -0.22
PSMC1-206ENST00000555787 HOMEZQ8IX15 550 aa13.67□□□□□ -0.22
PSMC1-206ENST00000555787 RGL2O15211 777 aa13.62□□□□□ -0.23
PSMC1-206ENST00000555787 ECM2O94769 699 aaPredicted RBP13.62□□□□□ -0.23
PSMC1-206ENST00000555787 NBR1Q14596 966 aa13.62□□□□□ -0.23
PSMC1-206ENST00000555787 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
PSMC1-206ENST00000555787 PROM2Q8N271 834 aa13.6□□□□□ -0.23
PSMC1-206ENST00000555787 SPRYD3Q8NCJ5 442 aa13.59□□□□□ -0.23
PSMC1-206ENST00000555787 ABCC9O60706 1549 aa13.59□□□□□ -0.23
PSMC1-206ENST00000555787 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
PSMC1-206ENST00000555787 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.24
PSMC1-206ENST00000555787 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
PSMC1-206ENST00000555787 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
PSMC1-206ENST00000555787 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
PSMC1-206ENST00000555787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.26
PSMC1-206ENST00000555787 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
PSMC1-206ENST00000555787 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
PSMC1-206ENST00000555787 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
PSMC1-206ENST00000555787 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
PSMC1-206ENST00000555787 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
PSMC1-206ENST00000555787 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
PSMC1-206ENST00000555787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
PSMC1-206ENST00000555787 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
PSMC1-206ENST00000555787 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
PSMC1-206ENST00000555787 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
PSMC1-206ENST00000555787 UBTFP17480 764 aaKnown RBP13.21□□□□□ -0.29
PSMC1-206ENST00000555787 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
PSMC1-206ENST00000555787 NACADO15069 1562 aa13.17□□□□□ -0.3
PSMC1-206ENST00000555787 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
PSMC1-206ENST00000555787 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
PSMC1-206ENST00000555787 RANGAP1P46060 587 aaPredicted RBP13.12□□□□□ -0.31
PSMC1-206ENST00000555787 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
PSMC1-206ENST00000555787 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
PSMC1-206ENST00000555787 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
PSMC1-206ENST00000555787 ZCCHC6Q5VYS8 1495 aaKnown RBP13.06□□□□□ -0.32
PSMC1-206ENST00000555787 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
PSMC1-206ENST00000555787 DCAF1Q9Y4B6 1507 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms