RNA–Protein interactions for RNA: ENST00000555427.1

MC1R-203, Transcript of melanocortin 1 receptor, humanhuman

TSL 5 BASIC

Gene MC1R, Length 3,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MC1R-203ENST00000555427 NISCHQ9Y2I1 1504 aa23.34■■□□□ 1.33
MC1R-203ENST00000555427 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
MC1R-203ENST00000555427 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
MC1R-203ENST00000555427 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
MC1R-203ENST00000555427 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
MC1R-203ENST00000555427 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
MC1R-203ENST00000555427 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
MC1R-203ENST00000555427 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
MC1R-203ENST00000555427 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
MC1R-203ENST00000555427 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
MC1R-203ENST00000555427 ABCC9O60706 1549 aa18.57■□□□□ 0.56
MC1R-203ENST00000555427 LOC105371045A0A1W2PR82 267 aa18.51■□□□□ 0.55
MC1R-203ENST00000555427 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
MC1R-203ENST00000555427 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
MC1R-203ENST00000555427 HRCP23327 699 aa18.43■□□□□ 0.54
MC1R-203ENST00000555427 NACADO15069 1562 aa18.36■□□□□ 0.53
MC1R-203ENST00000555427 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
MC1R-203ENST00000555427 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
MC1R-203ENST00000555427 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
MC1R-203ENST00000555427 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
MC1R-203ENST00000555427 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
MC1R-203ENST00000555427 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
MC1R-203ENST00000555427 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
MC1R-203ENST00000555427 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
MC1R-203ENST00000555427 WIZO95785 1651 aa18.02■□□□□ 0.48
MC1R-203ENST00000555427 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
MC1R-203ENST00000555427 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.43
MC1R-203ENST00000555427 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
MC1R-203ENST00000555427 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
MC1R-203ENST00000555427 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
MC1R-203ENST00000555427 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
MC1R-203ENST00000555427 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
MC1R-203ENST00000555427 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
MC1R-203ENST00000555427 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
MC1R-203ENST00000555427 SMARCA2P51531 1590 aa17.64■□□□□ 0.41
MC1R-203ENST00000555427 SOGA1O94964 1423 aa17.52■□□□□ 0.4
MC1R-203ENST00000555427 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
MC1R-203ENST00000555427 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
MC1R-203ENST00000555427 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
MC1R-203ENST00000555427 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
MC1R-203ENST00000555427 EEA1Q15075 1411 aa17.45■□□□□ 0.38
MC1R-203ENST00000555427 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
MC1R-203ENST00000555427 CCER1Q8TC90 406 aaPredicted RBP17.44■□□□□ 0.38
MC1R-203ENST00000555427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
MC1R-203ENST00000555427 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
MC1R-203ENST00000555427 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
MC1R-203ENST00000555427 RUSC2Q8N2Y8 1516 aa17.41■□□□□ 0.38
MC1R-203ENST00000555427 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
MC1R-203ENST00000555427 ATAD2BQ9ULI0 1458 aa17.35■□□□□ 0.37
MC1R-203ENST00000555427 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
MC1R-203ENST00000555427 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
MC1R-203ENST00000555427 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
MC1R-203ENST00000555427 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
MC1R-203ENST00000555427 RANGAP1P46060 587 aaPredicted RBP17.19■□□□□ 0.34
MC1R-203ENST00000555427 APLP2Q06481 763 aa17.16■□□□□ 0.34
MC1R-203ENST00000555427 CLIP1P30622 1438 aa17.16■□□□□ 0.34
MC1R-203ENST00000555427 KIF21BO75037 1637 aa17.12■□□□□ 0.33
MC1R-203ENST00000555427 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
MC1R-203ENST00000555427 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.33
MC1R-203ENST00000555427 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
MC1R-203ENST00000555427 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
MC1R-203ENST00000555427 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
MC1R-203ENST00000555427 NCAPD3P42695 1498 aa17.02■□□□□ 0.31
MC1R-203ENST00000555427 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
MC1R-203ENST00000555427 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
MC1R-203ENST00000555427 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
MC1R-203ENST00000555427 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
MC1R-203ENST00000555427 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
MC1R-203ENST00000555427 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
MC1R-203ENST00000555427 CUX1P39880 1505 aa16.89■□□□□ 0.29
MC1R-203ENST00000555427 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
MC1R-203ENST00000555427 CFTRP13569 1480 aa16.87■□□□□ 0.29
MC1R-203ENST00000555427 ACIN1Q9UKV3 1341 aaKnown RBP16.84■□□□□ 0.29
MC1R-203ENST00000555427 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
MC1R-203ENST00000555427 NEUROD1Q13562 356 aa16.81■□□□□ 0.28
MC1R-203ENST00000555427 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
MC1R-203ENST00000555427 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
MC1R-203ENST00000555427 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
MC1R-203ENST00000555427 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
MC1R-203ENST00000555427 CUX2O14529 1486 aa16.74■□□□□ 0.27
MC1R-203ENST00000555427 IGF1RP08069 1367 aa16.69■□□□□ 0.26
MC1R-203ENST00000555427 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
MC1R-203ENST00000555427 ITGAEP38570 1179 aa16.68■□□□□ 0.26
MC1R-203ENST00000555427 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
MC1R-203ENST00000555427 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
MC1R-203ENST00000555427 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
MC1R-203ENST00000555427 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
MC1R-203ENST00000555427 MIER1Q8N108 512 aa16.64■□□□□ 0.25
MC1R-203ENST00000555427 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
MC1R-203ENST00000555427 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
MC1R-203ENST00000555427 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
MC1R-203ENST00000555427 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
MC1R-203ENST00000555427 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
MC1R-203ENST00000555427 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
MC1R-203ENST00000555427 P3H3Q8IVL6 736 aa16.58■□□□□ 0.24
MC1R-203ENST00000555427 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
MC1R-203ENST00000555427 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
MC1R-203ENST00000555427 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
MC1R-203ENST00000555427 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
MC1R-203ENST00000555427 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms