RNA–Protein interactions for RNA: ENST00000555153.2

FXNP1-201, Transcript of frataxin pseudogene 1, humanhuman

BASIC

Gene FXNP1, Length 337 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXNP1-201ENST00000555153 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
FXNP1-201ENST00000555153 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
FXNP1-201ENST00000555153 ZCCHC6Q5VYS8 1495 aaKnown RBP13.34□□□□□ -0.27
FXNP1-201ENST00000555153 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
FXNP1-201ENST00000555153 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
FXNP1-201ENST00000555153 NACADO15069 1562 aa12.67□□□□□ -0.38
FXNP1-201ENST00000555153 ABCC9O60706 1549 aa12.52□□□□□ -0.4
FXNP1-201ENST00000555153 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
FXNP1-201ENST00000555153 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
FXNP1-201ENST00000555153 SCRIBQ14160 1630 aa12.35□□□□□ -0.43
FXNP1-201ENST00000555153 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
FXNP1-201ENST00000555153 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
FXNP1-201ENST00000555153 DCAF8L2P0C7V8 631 aa12.23□□□□□ -0.45
FXNP1-201ENST00000555153 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
FXNP1-201ENST00000555153 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
FXNP1-201ENST00000555153 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
FXNP1-201ENST00000555153 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
FXNP1-201ENST00000555153 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
FXNP1-201ENST00000555153 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
FXNP1-201ENST00000555153 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
FXNP1-201ENST00000555153 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
FXNP1-201ENST00000555153 CHIC1Q5VXU3 224 aa12□□□□□ -0.49
FXNP1-201ENST00000555153 WIZO95785 1651 aa11.97□□□□□ -0.49
FXNP1-201ENST00000555153 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
FXNP1-201ENST00000555153 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
FXNP1-201ENST00000555153 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
FXNP1-201ENST00000555153 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
FXNP1-201ENST00000555153 HMGXB3Q12766 1538 aa11.75□□□□□ -0.53
FXNP1-201ENST00000555153 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
FXNP1-201ENST00000555153 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
FXNP1-201ENST00000555153 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
FXNP1-201ENST00000555153 EEA1Q15075 1411 aa11.53□□□□□ -0.56
FXNP1-201ENST00000555153 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
FXNP1-201ENST00000555153 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
FXNP1-201ENST00000555153 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
FXNP1-201ENST00000555153 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
FXNP1-201ENST00000555153 CFTRP13569 1480 aa11.48□□□□□ -0.57
FXNP1-201ENST00000555153 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
FXNP1-201ENST00000555153 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
FXNP1-201ENST00000555153 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
FXNP1-201ENST00000555153 KIF21BO75037 1637 aa11.4□□□□□ -0.58
FXNP1-201ENST00000555153 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
FXNP1-201ENST00000555153 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
FXNP1-201ENST00000555153 SOGA1O94964 1423 aa11.33□□□□□ -0.6
FXNP1-201ENST00000555153 TNIKQ9UKE5 1360 aa11.32□□□□□ -0.6
FXNP1-201ENST00000555153 CUX1P39880 1505 aa11.31□□□□□ -0.6
FXNP1-201ENST00000555153 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
FXNP1-201ENST00000555153 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
FXNP1-201ENST00000555153 GOLGA3Q08378 1498 aa11.27□□□□□ -0.6
FXNP1-201ENST00000555153 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.6
FXNP1-201ENST00000555153 PRXQ9BXM0 1461 aa11.26□□□□□ -0.61
FXNP1-201ENST00000555153 RUSC2Q8N2Y8 1516 aa11.26□□□□□ -0.61
FXNP1-201ENST00000555153 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
FXNP1-201ENST00000555153 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
FXNP1-201ENST00000555153 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
FXNP1-201ENST00000555153 DNMBPQ6XZF7 1577 aa11.17□□□□□ -0.62
FXNP1-201ENST00000555153 TRIM26Q12899 539 aaPredicted RBP11.15□□□□□ -0.62
FXNP1-201ENST00000555153 WDR97A6NE52 1622 aa11.15□□□□□ -0.62
FXNP1-201ENST00000555153 KIF27Q86VH2 1401 aa11.13□□□□□ -0.63
FXNP1-201ENST00000555153 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
FXNP1-201ENST00000555153 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
FXNP1-201ENST00000555153 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
FXNP1-201ENST00000555153 HRCP23327 699 aa11.11□□□□□ -0.63
FXNP1-201ENST00000555153 FGD5Q6ZNL6 1462 aa11.08□□□□□ -0.64
FXNP1-201ENST00000555153 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
FXNP1-201ENST00000555153 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
FXNP1-201ENST00000555153 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
FXNP1-201ENST00000555153 ABCA5Q8WWZ7 1642 aa11.05□□□□□ -0.64
FXNP1-201ENST00000555153 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
FXNP1-201ENST00000555153 IGF1RP08069 1367 aa11.04□□□□□ -0.64
FXNP1-201ENST00000555153 CLIP1P30622 1438 aa11.03□□□□□ -0.64
FXNP1-201ENST00000555153 CUL7Q14999 1698 aa11.03□□□□□ -0.64
FXNP1-201ENST00000555153 PCGF6Q9BYE7 350 aa11.02□□□□□ -0.65
FXNP1-201ENST00000555153 MAP3K1Q13233 1512 aa11.02□□□□□ -0.65
FXNP1-201ENST00000555153 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.65
FXNP1-201ENST00000555153 ARAP1Q96P48 1450 aa11□□□□□ -0.65
FXNP1-201ENST00000555153 NESP48681 1621 aa11□□□□□ -0.65
FXNP1-201ENST00000555153 TARBP1Q13395 1621 aaKnown RBP11□□□□□ -0.65
FXNP1-201ENST00000555153 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
FXNP1-201ENST00000555153 CUX2O14529 1486 aa10.98□□□□□ -0.65
FXNP1-201ENST00000555153 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
FXNP1-201ENST00000555153 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
FXNP1-201ENST00000555153 WDR62O43379 1518 aa10.94□□□□□ -0.66
FXNP1-201ENST00000555153 EFCAB5A4FU69 1503 aa10.93□□□□□ -0.66
FXNP1-201ENST00000555153 CARMIL1Q5VZK9 1371 aa10.91□□□□□ -0.66
FXNP1-201ENST00000555153 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.66
FXNP1-201ENST00000555153 CTTNBP2Q8WZ74 1663 aa10.91□□□□□ -0.66
FXNP1-201ENST00000555153 SAMD9Q5K651 1589 aa10.9□□□□□ -0.67
FXNP1-201ENST00000555153 MRC2Q9UBG0 1479 aa10.88□□□□□ -0.67
FXNP1-201ENST00000555153 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
FXNP1-201ENST00000555153 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
FXNP1-201ENST00000555153 CFAP43Q8NDM7 1665 aa10.86□□□□□ -0.67
FXNP1-201ENST00000555153 RRBP1Q9P2E9 1410 aaKnown RBP10.85□□□□□ -0.67
FXNP1-201ENST00000555153 ZEB1P37275 1124 aaPredicted RBP10.85□□□□□ -0.67
FXNP1-201ENST00000555153 DNAJC5BQ9UF47 199 aa10.84□□□□□ -0.67
FXNP1-201ENST00000555153 GAPVD1Q14C86 1478 aa10.84□□□□□ -0.67
FXNP1-201ENST00000555153 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
FXNP1-201ENST00000555153 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
FXNP1-201ENST00000555153 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
FXNP1-201ENST00000555153 TIAM1Q13009 1591 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms