RNA–Protein interactions for RNA: ENST00000554228.5

KLC1-216, Transcript of kinesin light chain 1, humanhuman

TSL 5

Gene KLC1, Length 2,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-216ENST00000554228 NISCHQ9Y2I1 1504 aa41.37■■■■■ 4.21
KLC1-216ENST00000554228 SHROOM4Q9ULL8 1493 aa35.72■■■■□ 3.31
KLC1-216ENST00000554228 SUPT5HO00267 1087 aaKnown RBP35.01■■■■□ 3.19
KLC1-216ENST00000554228 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
KLC1-216ENST00000554228 CCDC180Q9P1Z9 1646 aa34.95■■■■□ 3.19
KLC1-216ENST00000554228 DCAF8L2P0C7V8 631 aa34.77■■■■□ 3.16
KLC1-216ENST00000554228 CHIC1Q5VXU3 224 aa33.93■■■■□ 3.02
KLC1-216ENST00000554228 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
KLC1-216ENST00000554228 DCAF1Q9Y4B6 1507 aa33.78■■■■□ 3
KLC1-216ENST00000554228 LOC105371045A0A1W2PR82 267 aa33.08■■■□□ 2.89
KLC1-216ENST00000554228 SCRIBQ14160 1630 aa33.05■■■□□ 2.88
KLC1-216ENST00000554228 PCGF6Q9BYE7 350 aa33.02■■■□□ 2.88
KLC1-216ENST00000554228 ABCC9O60706 1549 aa32.99■■■□□ 2.87
KLC1-216ENST00000554228 HRCP23327 699 aa32.94■■■□□ 2.86
KLC1-216ENST00000554228 RSF1Q96T23 1441 aaPredicted RBP32.84■■■□□ 2.85
KLC1-216ENST00000554228 RB1CC1Q8TDY2 1594 aa32.51■■■□□ 2.8
KLC1-216ENST00000554228 PPARGC1BQ86YN6 1023 aaKnown RBP32.47■■■□□ 2.79
KLC1-216ENST00000554228 TRIM41Q8WV44 630 aa32.45■■■□□ 2.79
KLC1-216ENST00000554228 FAM9AQ8IZU1 332 aaPredicted RBP32.44■■■□□ 2.78
KLC1-216ENST00000554228 CECR2Q9BXF3 1484 aa32.42■■■□□ 2.78
KLC1-216ENST00000554228 EHMT2Q96KQ7 1210 aa32.38■■■□□ 2.77
KLC1-216ENST00000554228 NACADO15069 1562 aa32.37■■■□□ 2.77
KLC1-216ENST00000554228 MROH2BQ7Z745 1585 aa32.26■■■□□ 2.75
KLC1-216ENST00000554228 TRIM26Q12899 539 aaPredicted RBP32.22■■■□□ 2.75
KLC1-216ENST00000554228 WIZO95785 1651 aa32.08■■■□□ 2.73
KLC1-216ENST00000554228 BAZ1AQ9NRL2 1556 aaPredicted RBP31.75■■■□□ 2.67
KLC1-216ENST00000554228 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
KLC1-216ENST00000554228 PABPN1Q86U42 306 aaKnown RBP eCLIP31.5■■■□□ 2.63
KLC1-216ENST00000554228 SMARCA4P51532 1647 aa31.47■■■□□ 2.63
KLC1-216ENST00000554228 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
KLC1-216ENST00000554228 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
KLC1-216ENST00000554228 CCDC88BA6NC98 1476 aa31.45■■■□□ 2.63
KLC1-216ENST00000554228 TOP2AP11388 1531 aaKnown RBP31.45■■■□□ 2.63
KLC1-216ENST00000554228 ZEB1P37275 1124 aaPredicted RBP31.41■■■□□ 2.62
KLC1-216ENST00000554228 SMARCA2P51531 1590 aa31.34■■■□□ 2.61
KLC1-216ENST00000554228 TTBK1Q5TCY1 1321 aaPredicted RBP31.29■■■□□ 2.6
KLC1-216ENST00000554228 SOGA1O94964 1423 aa31.19■■■□□ 2.58
KLC1-216ENST00000554228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.1■■■□□ 2.57
KLC1-216ENST00000554228 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
KLC1-216ENST00000554228 RUSC2Q8N2Y8 1516 aa31.07■■■□□ 2.56
KLC1-216ENST00000554228 CEP162Q5TB80 1403 aa31■■■□□ 2.55
KLC1-216ENST00000554228 CSRNP3Q8WYN3 585 aa30.98■■■□□ 2.55
KLC1-216ENST00000554228 UBTFP17480 764 aaKnown RBP30.95■■■□□ 2.54
KLC1-216ENST00000554228 CCER1Q8TC90 406 aaPredicted RBP30.93■■■□□ 2.54
KLC1-216ENST00000554228 TNIKQ9UKE5 1360 aa30.89■■■□□ 2.54
KLC1-216ENST00000554228 WRNQ14191 1432 aaPredicted RBP eCLIP30.87■■■□□ 2.53
KLC1-216ENST00000554228 EEA1Q15075 1411 aa30.78■■■□□ 2.52
KLC1-216ENST00000554228 PEG3Q9GZU2 1588 aa30.77■■■□□ 2.52
KLC1-216ENST00000554228 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
KLC1-216ENST00000554228 SYNJ1O43426 1573 aa30.68■■■□□ 2.5
KLC1-216ENST00000554228 GOLGA3Q08378 1498 aa30.68■■■□□ 2.5
KLC1-216ENST00000554228 RANGAP1P46060 587 aaPredicted RBP30.63■■■□□ 2.49
KLC1-216ENST00000554228 BAZ1BQ9UIG0 1483 aaKnown RBP30.62■■■□□ 2.49
KLC1-216ENST00000554228 CEP164Q9UPV0 1460 aa30.49■■■□□ 2.47
KLC1-216ENST00000554228 SCAF1Q9H7N4 1312 aaKnown RBP30.46■■■□□ 2.47
KLC1-216ENST00000554228 CLIP1P30622 1438 aa30.4■■■□□ 2.46
KLC1-216ENST00000554228 KIF21BO75037 1637 aa30.39■■■□□ 2.46
KLC1-216ENST00000554228 RAPGEF2Q9Y4G8 1499 aa30.38■■■□□ 2.45
KLC1-216ENST00000554228 HNRNPUL2Q1KMD3 747 aaKnown RBP30.37■■■□□ 2.45
KLC1-216ENST00000554228 DIEXFQ68CQ4 756 aaKnown RBP30.33■■■□□ 2.45
KLC1-216ENST00000554228 VPS8Q8N3P4 1428 aa30.23■■■□□ 2.43
KLC1-216ENST00000554228 TOP2BQ02880 1626 aa30.21■■■□□ 2.43
KLC1-216ENST00000554228 APLP2Q06481 763 aa30.17■■■□□ 2.42
KLC1-216ENST00000554228 NEUROD1Q13562 356 aa30.14■■■□□ 2.42
KLC1-216ENST00000554228 ACIN1Q9UKV3 1341 aaKnown RBP30.08■■■□□ 2.41
KLC1-216ENST00000554228 ZNF316A6NFI3 1004 aaPredicted RBP30.06■■■□□ 2.4
KLC1-216ENST00000554228 BIVM-ERCC5R4GMW8 1640 aa30.05■■■□□ 2.4
KLC1-216ENST00000554228 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
KLC1-216ENST00000554228 CUX1P39880 1505 aa29.99■■■□□ 2.39
KLC1-216ENST00000554228 PRXQ9BXM0 1461 aa29.98■■■□□ 2.39
KLC1-216ENST00000554228 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
KLC1-216ENST00000554228 KANK4Q5T7N3 995 aaPredicted RBP29.91■■■□□ 2.38
KLC1-216ENST00000554228 ARAP1Q96P48 1450 aa29.9■■■□□ 2.38
KLC1-216ENST00000554228 ERICH3Q5RHP9 1530 aa29.88■■■□□ 2.37
KLC1-216ENST00000554228 CFTRP13569 1480 aa29.84■■■□□ 2.37
KLC1-216ENST00000554228 KIF27Q86VH2 1401 aa29.83■■■□□ 2.37
KLC1-216ENST00000554228 CENPBP07199 599 aaPredicted RBP29.83■■■□□ 2.37
KLC1-216ENST00000554228 GTF3C3Q9Y5Q9 886 aa29.82■■■□□ 2.36
KLC1-216ENST00000554228 YTHDC1Q96MU7 727 aaKnown RBP29.78■■■□□ 2.36
KLC1-216ENST00000554228 MIER1Q8N108 512 aa29.74■■■□□ 2.35
KLC1-216ENST00000554228 ITGAEP38570 1179 aa29.64■■■□□ 2.34
KLC1-216ENST00000554228 ARHGAP35Q9NRY4 1499 aa29.64■■■□□ 2.34
KLC1-216ENST00000554228 DHX57Q6P158 1386 aaKnown RBP29.63■■■□□ 2.33
KLC1-216ENST00000554228 CUX2O14529 1486 aa29.61■■■□□ 2.33
KLC1-216ENST00000554228 IGF1RP08069 1367 aa29.59■■■□□ 2.33
KLC1-216ENST00000554228 PELP1Q8IZL8 1130 aaKnown RBP29.55■■■□□ 2.32
KLC1-216ENST00000554228 CADPSQ9ULU8 1353 aa29.53■■■□□ 2.32
KLC1-216ENST00000554228 RRBP1Q9P2E9 1410 aaKnown RBP29.52■■■□□ 2.32
KLC1-216ENST00000554228 P3H3Q8IVL6 736 aa29.47■■■□□ 2.31
KLC1-216ENST00000554228 CCNB3Q8WWL7 1395 aa29.46■■■□□ 2.31
KLC1-216ENST00000554228 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
KLC1-216ENST00000554228 CARMIL1Q5VZK9 1371 aa29.45■■■□□ 2.3
KLC1-216ENST00000554228 CLSPNQ9HAW4 1339 aa29.44■■■□□ 2.3
KLC1-216ENST00000554228 PRDM2Q13029 1718 aa29.43■■■□□ 2.3
KLC1-216ENST00000554228 ATP1B4Q9UN42 357 aaPredicted RBP29.38■■■□□ 2.29
KLC1-216ENST00000554228 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
KLC1-216ENST00000554228 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.28
KLC1-216ENST00000554228 TIAM1Q13009 1591 aa29.26■■■□□ 2.27
KLC1-216ENST00000554228 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
KLC1-216ENST00000554228 RAB3GAP2Q9H2M9 1393 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms