RNA–Protein interactions for RNA: ENST00000553565.1

SNW1-202, Transcript of SNW domain containing 1, humanhuman

TSL 2

Gene SNW1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-202ENST00000553565 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
SNW1-202ENST00000553565 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
SNW1-202ENST00000553565 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
SNW1-202ENST00000553565 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
SNW1-202ENST00000553565 FOXD1Q16676 465 aa18.08■□□□□ 0.48
SNW1-202ENST00000553565 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
SNW1-202ENST00000553565 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
SNW1-202ENST00000553565 ADRA2BP18089 450 aa16.98■□□□□ 0.31
SNW1-202ENST00000553565 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
SNW1-202ENST00000553565 MSH5O43196 834 aa16.7■□□□□ 0.26
SNW1-202ENST00000553565 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
SNW1-202ENST00000553565 MAPK8IP2Q13387 824 aaPredicted RBP15.6■□□□□ 0.09
SNW1-202ENST00000553565 DMRT2Q9Y5R5 561 aa15.35■□□□□ 0.05
SNW1-202ENST00000553565 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
SNW1-202ENST00000553565 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
SNW1-202ENST00000553565 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
SNW1-202ENST00000553565 HOXD11P31277 338 aaPredicted RBP14.84□□□□□ -0.03
SNW1-202ENST00000553565 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
SNW1-202ENST00000553565 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
SNW1-202ENST00000553565 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
SNW1-202ENST00000553565 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
SNW1-202ENST00000553565 KCNA4P22459 653 aa14.37□□□□□ -0.11
SNW1-202ENST00000553565 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
SNW1-202ENST00000553565 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
SNW1-202ENST00000553565 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
SNW1-202ENST00000553565 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
SNW1-202ENST00000553565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNW1-202ENST00000553565 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
SNW1-202ENST00000553565 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
SNW1-202ENST00000553565 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
SNW1-202ENST00000553565 CAPN15O75808 1086 aa13.54□□□□□ -0.24
SNW1-202ENST00000553565 DSG3P32926 999 aa13.52□□□□□ -0.25
SNW1-202ENST00000553565 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
SNW1-202ENST00000553565 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
SNW1-202ENST00000553565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
SNW1-202ENST00000553565 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
SNW1-202ENST00000553565 ABCB7O75027 752 aa13.31□□□□□ -0.28
SNW1-202ENST00000553565 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
SNW1-202ENST00000553565 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
SNW1-202ENST00000553565 ZBTB22O15209 634 aa13.29□□□□□ -0.28
SNW1-202ENST00000553565 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
SNW1-202ENST00000553565 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
SNW1-202ENST00000553565 APLP2Q06481 763 aa13.23□□□□□ -0.29
SNW1-202ENST00000553565 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
SNW1-202ENST00000553565 POLA2Q14181 598 aa13.07□□□□□ -0.32
SNW1-202ENST00000553565 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
SNW1-202ENST00000553565 POTEHQ6S545 545 aa12.73□□□□□ -0.37
SNW1-202ENST00000553565 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
SNW1-202ENST00000553565 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
SNW1-202ENST00000553565 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
SNW1-202ENST00000553565 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
SNW1-202ENST00000553565 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
SNW1-202ENST00000553565 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
SNW1-202ENST00000553565 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
SNW1-202ENST00000553565 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
SNW1-202ENST00000553565 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
SNW1-202ENST00000553565 FBLN2P98095 1184 aa12.41□□□□□ -0.42
SNW1-202ENST00000553565 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
SNW1-202ENST00000553565 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
SNW1-202ENST00000553565 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
SNW1-202ENST00000553565 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
SNW1-202ENST00000553565 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
SNW1-202ENST00000553565 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
SNW1-202ENST00000553565 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
SNW1-202ENST00000553565 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNW1-202ENST00000553565 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
SNW1-202ENST00000553565 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNW1-202ENST00000553565 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
SNW1-202ENST00000553565 EVX2Q03828 476 aa12.02□□□□□ -0.49
SNW1-202ENST00000553565 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
SNW1-202ENST00000553565 HAX1O00165 279 aa11.97□□□□□ -0.49
SNW1-202ENST00000553565 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
SNW1-202ENST00000553565 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
SNW1-202ENST00000553565 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
SNW1-202ENST00000553565 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
SNW1-202ENST00000553565 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
SNW1-202ENST00000553565 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
SNW1-202ENST00000553565 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
SNW1-202ENST00000553565 PROM2Q8N271 834 aa11.69□□□□□ -0.54
SNW1-202ENST00000553565 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
SNW1-202ENST00000553565 GABBR2O75899 941 aa11.62□□□□□ -0.55
SNW1-202ENST00000553565 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
SNW1-202ENST00000553565 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
SNW1-202ENST00000553565 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
SNW1-202ENST00000553565 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
SNW1-202ENST00000553565 FKBP8Q14318 412 aa11.45□□□□□ -0.58
SNW1-202ENST00000553565 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
SNW1-202ENST00000553565 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
SNW1-202ENST00000553565 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
SNW1-202ENST00000553565 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNW1-202ENST00000553565 MIER1Q8N108 512 aa11.32□□□□□ -0.6
SNW1-202ENST00000553565 CLCN6P51797 869 aa11.29□□□□□ -0.6
SNW1-202ENST00000553565 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
SNW1-202ENST00000553565 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
SNW1-202ENST00000553565 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
SNW1-202ENST00000553565 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
SNW1-202ENST00000553565 LHX8Q68G74 356 aa11.23□□□□□ -0.61
SNW1-202ENST00000553565 DCBLD2Q96PD2 775 aa11.23□□□□□ -0.61
SNW1-202ENST00000553565 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
SNW1-202ENST00000553565 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms