RNA–Protein interactions for RNA: ENST00000553534.1

AL355922.5-201, humanhuman

TSL 3 BASIC

Gene AL355922.5, Length 351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355922.5-201ENST00000553534 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
AL355922.5-201ENST00000553534 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
AL355922.5-201ENST00000553534 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
AL355922.5-201ENST00000553534 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
AL355922.5-201ENST00000553534 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
AL355922.5-201ENST00000553534 FOXD1Q16676 465 aa21.9■■□□□ 1.1
AL355922.5-201ENST00000553534 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
AL355922.5-201ENST00000553534 ADRA2BP18089 450 aa21.18■□□□□ 0.98
AL355922.5-201ENST00000553534 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
AL355922.5-201ENST00000553534 MSH5O43196 834 aa20.06■□□□□ 0.8
AL355922.5-201ENST00000553534 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
AL355922.5-201ENST00000553534 KCNA4P22459 653 aa19.42■□□□□ 0.7
AL355922.5-201ENST00000553534 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
AL355922.5-201ENST00000553534 MAPK8IP2Q13387 824 aaPredicted RBP19.18■□□□□ 0.66
AL355922.5-201ENST00000553534 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
AL355922.5-201ENST00000553534 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
AL355922.5-201ENST00000553534 NPM3O75607 178 aaKnown RBP18.94■□□□□ 0.62
AL355922.5-201ENST00000553534 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
AL355922.5-201ENST00000553534 RNF216Q9NWF9 866 aaPredicted RBP18.68■□□□□ 0.58
AL355922.5-201ENST00000553534 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
AL355922.5-201ENST00000553534 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
AL355922.5-201ENST00000553534 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
AL355922.5-201ENST00000553534 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
AL355922.5-201ENST00000553534 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
AL355922.5-201ENST00000553534 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
AL355922.5-201ENST00000553534 ZBTB22O15209 634 aa17.93■□□□□ 0.46
AL355922.5-201ENST00000553534 SLC4A2P04920 1241 aa17.89■□□□□ 0.45
AL355922.5-201ENST00000553534 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
AL355922.5-201ENST00000553534 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
AL355922.5-201ENST00000553534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
AL355922.5-201ENST00000553534 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
AL355922.5-201ENST00000553534 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
AL355922.5-201ENST00000553534 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
AL355922.5-201ENST00000553534 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
AL355922.5-201ENST00000553534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
AL355922.5-201ENST00000553534 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
AL355922.5-201ENST00000553534 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
AL355922.5-201ENST00000553534 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
AL355922.5-201ENST00000553534 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
AL355922.5-201ENST00000553534 APLP2Q06481 763 aa16.91■□□□□ 0.3
AL355922.5-201ENST00000553534 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
AL355922.5-201ENST00000553534 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
AL355922.5-201ENST00000553534 CAPN15O75808 1086 aa16.68■□□□□ 0.26
AL355922.5-201ENST00000553534 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
AL355922.5-201ENST00000553534 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
AL355922.5-201ENST00000553534 DSG3P32926 999 aa16.49■□□□□ 0.23
AL355922.5-201ENST00000553534 POLA2Q14181 598 aa16.49■□□□□ 0.23
AL355922.5-201ENST00000553534 ABCB7O75027 752 aa16.41■□□□□ 0.22
AL355922.5-201ENST00000553534 MKRN4PQ13434 485 aaPredicted RBP16.33■□□□□ 0.2
AL355922.5-201ENST00000553534 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
AL355922.5-201ENST00000553534 FBLN2P98095 1184 aa16.18■□□□□ 0.18
AL355922.5-201ENST00000553534 FKBP8Q14318 412 aa16.11■□□□□ 0.17
AL355922.5-201ENST00000553534 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
AL355922.5-201ENST00000553534 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
AL355922.5-201ENST00000553534 PROM2Q8N271 834 aa15.86■□□□□ 0.13
AL355922.5-201ENST00000553534 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
AL355922.5-201ENST00000553534 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
AL355922.5-201ENST00000553534 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
AL355922.5-201ENST00000553534 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
AL355922.5-201ENST00000553534 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
AL355922.5-201ENST00000553534 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
AL355922.5-201ENST00000553534 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
AL355922.5-201ENST00000553534 AKT1S1Q96B36 256 aa15.52■□□□□ 0.08
AL355922.5-201ENST00000553534 FBXO3Q9UK99 471 aa15.49■□□□□ 0.07
AL355922.5-201ENST00000553534 REM2Q8IYK8 340 aaPredicted RBP15.37■□□□□ 0.05
AL355922.5-201ENST00000553534 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
AL355922.5-201ENST00000553534 VASPP50552 380 aaPredicted RBP15.3■□□□□ 0.04
AL355922.5-201ENST00000553534 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
AL355922.5-201ENST00000553534 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
AL355922.5-201ENST00000553534 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
AL355922.5-201ENST00000553534 CLEC11AQ9Y240 323 aa15.14■□□□□ 0.01
AL355922.5-201ENST00000553534 PRR29P0C7W0 189 aa15.07■□□□□ 0
AL355922.5-201ENST00000553534 MIER1Q8N108 512 aa15.06■□□□□ 0
AL355922.5-201ENST00000553534 PLCD3Q8N3E9 789 aa15.02■□□□□ -0
AL355922.5-201ENST00000553534 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
AL355922.5-201ENST00000553534 AMER1Q5JTC6 1135 aaPredicted RBP15□□□□□ -0.01
AL355922.5-201ENST00000553534 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
AL355922.5-201ENST00000553534 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
AL355922.5-201ENST00000553534 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
AL355922.5-201ENST00000553534 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
AL355922.5-201ENST00000553534 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
AL355922.5-201ENST00000553534 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
AL355922.5-201ENST00000553534 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
AL355922.5-201ENST00000553534 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
AL355922.5-201ENST00000553534 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
AL355922.5-201ENST00000553534 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
AL355922.5-201ENST00000553534 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
AL355922.5-201ENST00000553534 NUBP1P53384 320 aa14.77□□□□□ -0.05
AL355922.5-201ENST00000553534 PKD2Q13563 968 aa14.74□□□□□ -0.05
AL355922.5-201ENST00000553534 FARP1Q9Y4F1 1045 aaPredicted RBP14.72□□□□□ -0.05
AL355922.5-201ENST00000553534 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
AL355922.5-201ENST00000553534 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
AL355922.5-201ENST00000553534 GSE1Q14687 1217 aa14.57□□□□□ -0.08
AL355922.5-201ENST00000553534 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
AL355922.5-201ENST00000553534 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
AL355922.5-201ENST00000553534 FAM212AQ96EL1 285 aa14.53□□□□□ -0.08
AL355922.5-201ENST00000553534 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
AL355922.5-201ENST00000553534 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
AL355922.5-201ENST00000553534 CHRM1P11229 460 aaPredicted RBP14.45□□□□□ -0.1
AL355922.5-201ENST00000553534 RGL2O15211 777 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms