RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 AEBP2Q6ZN18 517 aaPredicted RBP30.22■■■□□ 2.43
LETMD1-237ENST00000553175 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
LETMD1-237ENST00000553175 SENP3Q9H4L4 574 aaPredicted RBP25.68■■□□□ 1.7
LETMD1-237ENST00000553175 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
LETMD1-237ENST00000553175 FOXD1Q16676 465 aa24.04■■□□□ 1.44
LETMD1-237ENST00000553175 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
LETMD1-237ENST00000553175 MSH5O43196 834 aa22.47■■□□□ 1.19
LETMD1-237ENST00000553175 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
LETMD1-237ENST00000553175 PIAS4Q8N2W9 510 aaPredicted RBP22.33■■□□□ 1.17
LETMD1-237ENST00000553175 POTEDQ86YR6 584 aa22.32■■□□□ 1.16
LETMD1-237ENST00000553175 ADRA2BP18089 450 aa22.25■■□□□ 1.15
LETMD1-237ENST00000553175 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
LETMD1-237ENST00000553175 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
LETMD1-237ENST00000553175 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
LETMD1-237ENST00000553175 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
LETMD1-237ENST00000553175 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
LETMD1-237ENST00000553175 CNKSR2Q8WXI2 1034 aa19.46■□□□□ 0.71
LETMD1-237ENST00000553175 DCAF8L1A6NGE4 600 aa19.44■□□□□ 0.7
LETMD1-237ENST00000553175 CACNB1Q02641 598 aaPredicted RBP19.39■□□□□ 0.69
LETMD1-237ENST00000553175 RNF216Q9NWF9 866 aaPredicted RBP19.35■□□□□ 0.69
LETMD1-237ENST00000553175 RNF39Q9H2S5 420 aa19.23■□□□□ 0.67
LETMD1-237ENST00000553175 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
LETMD1-237ENST00000553175 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
LETMD1-237ENST00000553175 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
LETMD1-237ENST00000553175 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
LETMD1-237ENST00000553175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
LETMD1-237ENST00000553175 KCNA4P22459 653 aa18.23■□□□□ 0.51
LETMD1-237ENST00000553175 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
LETMD1-237ENST00000553175 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-237ENST00000553175 SLC4A2P04920 1241 aa18■□□□□ 0.47
LETMD1-237ENST00000553175 DSG3P32926 999 aa17.95■□□□□ 0.46
LETMD1-237ENST00000553175 CAPN15O75808 1086 aa17.92■□□□□ 0.46
LETMD1-237ENST00000553175 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
LETMD1-237ENST00000553175 APLP2Q06481 763 aa17.55■□□□□ 0.4
LETMD1-237ENST00000553175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
LETMD1-237ENST00000553175 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
LETMD1-237ENST00000553175 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
LETMD1-237ENST00000553175 ABCB7O75027 752 aa17.51■□□□□ 0.39
LETMD1-237ENST00000553175 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-237ENST00000553175 POTEHQ6S545 545 aa17.42■□□□□ 0.38
LETMD1-237ENST00000553175 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
LETMD1-237ENST00000553175 POLA2Q14181 598 aa17.13■□□□□ 0.33
LETMD1-237ENST00000553175 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
LETMD1-237ENST00000553175 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
LETMD1-237ENST00000553175 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
LETMD1-237ENST00000553175 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-237ENST00000553175 ZBTB22O15209 634 aa16.81■□□□□ 0.28
LETMD1-237ENST00000553175 CHRDL2Q6WN34 429 aa16.78■□□□□ 0.28
LETMD1-237ENST00000553175 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-237ENST00000553175 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
LETMD1-237ENST00000553175 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
LETMD1-237ENST00000553175 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
LETMD1-237ENST00000553175 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
LETMD1-237ENST00000553175 PIP4P2Q8N4L2 257 aa16.38■□□□□ 0.21
LETMD1-237ENST00000553175 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
LETMD1-237ENST00000553175 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
LETMD1-237ENST00000553175 SP7Q8TDD2 431 aaPredicted RBP16.24■□□□□ 0.19
LETMD1-237ENST00000553175 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
LETMD1-237ENST00000553175 SPDYE2BA6NHP3 402 aa16.2■□□□□ 0.18
LETMD1-237ENST00000553175 SPDYE6P0CI01 402 aa16.2■□□□□ 0.18
LETMD1-237ENST00000553175 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
LETMD1-237ENST00000553175 FBLN2P98095 1184 aa16.19■□□□□ 0.18
LETMD1-237ENST00000553175 HAX1O00165 279 aa16.06■□□□□ 0.16
LETMD1-237ENST00000553175 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
LETMD1-237ENST00000553175 EVX2Q03828 476 aa15.99■□□□□ 0.15
LETMD1-237ENST00000553175 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
LETMD1-237ENST00000553175 SPDYE1Q8NFV5 336 aaPredicted RBP15.94■□□□□ 0.14
LETMD1-237ENST00000553175 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
LETMD1-237ENST00000553175 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
LETMD1-237ENST00000553175 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
LETMD1-237ENST00000553175 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
LETMD1-237ENST00000553175 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
LETMD1-237ENST00000553175 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
LETMD1-237ENST00000553175 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
LETMD1-237ENST00000553175 GABBR2O75899 941 aa15.55■□□□□ 0.08
LETMD1-237ENST00000553175 FARP1Q9Y4F1 1045 aaPredicted RBP15.44■□□□□ 0.06
LETMD1-237ENST00000553175 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
LETMD1-237ENST00000553175 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
LETMD1-237ENST00000553175 CREBZFQ9NS37 354 aa15.29■□□□□ 0.04
LETMD1-237ENST00000553175 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
LETMD1-237ENST00000553175 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
LETMD1-237ENST00000553175 LHX8Q68G74 356 aa15.23■□□□□ 0.03
LETMD1-237ENST00000553175 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
LETMD1-237ENST00000553175 CLCN6P51797 869 aa15.18■□□□□ 0.02
LETMD1-237ENST00000553175 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
LETMD1-237ENST00000553175 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
LETMD1-237ENST00000553175 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
LETMD1-237ENST00000553175 DCBLD2Q96PD2 775 aa15□□□□□ -0.01
LETMD1-237ENST00000553175 GALR2O43603 387 aaPredicted RBP14.99□□□□□ -0.01
LETMD1-237ENST00000553175 PROM2Q8N271 834 aa14.96□□□□□ -0.01
LETMD1-237ENST00000553175 PHF12Q96QT6 1004 aa14.91□□□□□ -0.02
LETMD1-237ENST00000553175 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
LETMD1-237ENST00000553175 PAK3O75914 559 aaPredicted RBP14.86□□□□□ -0.03
LETMD1-237ENST00000553175 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
LETMD1-237ENST00000553175 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
LETMD1-237ENST00000553175 OTUD5Q96G74 571 aa14.72□□□□□ -0.05
LETMD1-237ENST00000553175 MS4A3Q96HJ5 214 aa14.71□□□□□ -0.05
LETMD1-237ENST00000553175 ASTLQ6HA08 431 aaPredicted RBP14.68□□□□□ -0.06
LETMD1-237ENST00000553175 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
LETMD1-237ENST00000553175 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms