RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 AEBP2Q6ZN18 517 aaPredicted RBP31.08■■■□□ 2.57
CEP290-206ENST00000552770 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
CEP290-206ENST00000552770 SENP3Q9H4L4 574 aaPredicted RBP26.3■■□□□ 1.8
CEP290-206ENST00000552770 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
CEP290-206ENST00000552770 FOXD1Q16676 465 aa24.66■■□□□ 1.54
CEP290-206ENST00000552770 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
CEP290-206ENST00000552770 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
CEP290-206ENST00000552770 ADRA2BP18089 450 aa22.98■■□□□ 1.27
CEP290-206ENST00000552770 PIAS4Q8N2W9 510 aaPredicted RBP22.96■■□□□ 1.27
CEP290-206ENST00000552770 MSH5O43196 834 aa22.92■■□□□ 1.26
CEP290-206ENST00000552770 POTEDQ86YR6 584 aa22.59■■□□□ 1.21
CEP290-206ENST00000552770 MAPK8IP2Q13387 824 aaPredicted RBP21.16■□□□□ 0.98
CEP290-206ENST00000552770 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
CEP290-206ENST00000552770 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.91
CEP290-206ENST00000552770 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
CEP290-206ENST00000552770 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
CEP290-206ENST00000552770 CNKSR2Q8WXI2 1034 aa20.08■□□□□ 0.81
CEP290-206ENST00000552770 DCAF8L1A6NGE4 600 aa20.04■□□□□ 0.8
CEP290-206ENST00000552770 RNF216Q9NWF9 866 aaPredicted RBP19.92■□□□□ 0.78
CEP290-206ENST00000552770 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
CEP290-206ENST00000552770 RNF39Q9H2S5 420 aa19.65■□□□□ 0.74
CEP290-206ENST00000552770 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
CEP290-206ENST00000552770 NPM3O75607 178 aaKnown RBP19.47■□□□□ 0.71
CEP290-206ENST00000552770 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
CEP290-206ENST00000552770 C1QBPQ07021 282 aaKnown RBP19.27■□□□□ 0.68
CEP290-206ENST00000552770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.12■□□□□ 0.65
CEP290-206ENST00000552770 KCNA4P22459 653 aa19.11■□□□□ 0.65
CEP290-206ENST00000552770 U3KPZ7 1027 aaPredicted RBP18.83■□□□□ 0.6
CEP290-206ENST00000552770 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
CEP290-206ENST00000552770 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
CEP290-206ENST00000552770 CAPN15O75808 1086 aa18.46■□□□□ 0.55
CEP290-206ENST00000552770 DSG3P32926 999 aa18.41■□□□□ 0.54
CEP290-206ENST00000552770 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
CEP290-206ENST00000552770 ABCB7O75027 752 aa18.11■□□□□ 0.49
CEP290-206ENST00000552770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
CEP290-206ENST00000552770 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
CEP290-206ENST00000552770 ZNF219Q9P2Y4 722 aaPredicted RBP18.04■□□□□ 0.48
CEP290-206ENST00000552770 APLP2Q06481 763 aa18.01■□□□□ 0.47
CEP290-206ENST00000552770 SAMD1Q6SPF0 538 aaPredicted RBP18■□□□□ 0.47
CEP290-206ENST00000552770 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
CEP290-206ENST00000552770 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
CEP290-206ENST00000552770 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
CEP290-206ENST00000552770 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
CEP290-206ENST00000552770 POLA2Q14181 598 aa17.67■□□□□ 0.42
CEP290-206ENST00000552770 ZBTB22O15209 634 aa17.65■□□□□ 0.42
CEP290-206ENST00000552770 POTEHQ6S545 545 aa17.65■□□□□ 0.42
CEP290-206ENST00000552770 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
CEP290-206ENST00000552770 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
CEP290-206ENST00000552770 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
CEP290-206ENST00000552770 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
CEP290-206ENST00000552770 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
CEP290-206ENST00000552770 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
CEP290-206ENST00000552770 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
CEP290-206ENST00000552770 MKRN4PQ13434 485 aaPredicted RBP16.85■□□□□ 0.29
CEP290-206ENST00000552770 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
CEP290-206ENST00000552770 PIP4P2Q8N4L2 257 aa16.78■□□□□ 0.28
CEP290-206ENST00000552770 FBLN2P98095 1184 aa16.76■□□□□ 0.27
CEP290-206ENST00000552770 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
CEP290-206ENST00000552770 SPDYE2BA6NHP3 402 aa16.7■□□□□ 0.26
CEP290-206ENST00000552770 SPDYE6P0CI01 402 aa16.7■□□□□ 0.26
CEP290-206ENST00000552770 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
CEP290-206ENST00000552770 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
CEP290-206ENST00000552770 SSUH2Q9Y2M2 353 aa16.55■□□□□ 0.24
CEP290-206ENST00000552770 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
CEP290-206ENST00000552770 SP7Q8TDD2 431 aaPredicted RBP16.51■□□□□ 0.23
CEP290-206ENST00000552770 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
CEP290-206ENST00000552770 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
CEP290-206ENST00000552770 HAX1O00165 279 aa16.43■□□□□ 0.22
CEP290-206ENST00000552770 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
CEP290-206ENST00000552770 EVX2Q03828 476 aa16.4■□□□□ 0.22
CEP290-206ENST00000552770 PRKAR2AP13861 404 aaKnown RBP16.34■□□□□ 0.21
CEP290-206ENST00000552770 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
CEP290-206ENST00000552770 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
CEP290-206ENST00000552770 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
CEP290-206ENST00000552770 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
CEP290-206ENST00000552770 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
CEP290-206ENST00000552770 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
CEP290-206ENST00000552770 GABBR2O75899 941 aa15.9■□□□□ 0.14
CEP290-206ENST00000552770 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
CEP290-206ENST00000552770 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
CEP290-206ENST00000552770 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
CEP290-206ENST00000552770 POTEIP0CG38 1075 aa15.66■□□□□ 0.1
CEP290-206ENST00000552770 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
CEP290-206ENST00000552770 MNX1P50219 401 aaPredicted RBP15.57■□□□□ 0.08
CEP290-206ENST00000552770 PROM2Q8N271 834 aa15.57■□□□□ 0.08
CEP290-206ENST00000552770 ZNF579Q8NAF0 562 aaKnown RBP15.57■□□□□ 0.08
CEP290-206ENST00000552770 LHX8Q68G74 356 aa15.49■□□□□ 0.07
CEP290-206ENST00000552770 GALR2O43603 387 aaPredicted RBP15.46■□□□□ 0.07
CEP290-206ENST00000552770 PHF12Q96QT6 1004 aa15.46■□□□□ 0.07
CEP290-206ENST00000552770 CLCN6P51797 869 aa15.41■□□□□ 0.06
CEP290-206ENST00000552770 DCBLD2Q96PD2 775 aa15.37■□□□□ 0.05
CEP290-206ENST00000552770 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
CEP290-206ENST00000552770 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
CEP290-206ENST00000552770 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
CEP290-206ENST00000552770 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
CEP290-206ENST00000552770 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
CEP290-206ENST00000552770 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
CEP290-206ENST00000552770 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
CEP290-206ENST00000552770 MIER1Q8N108 512 aa15.15■□□□□ 0.02
CEP290-206ENST00000552770 FKBP8Q14318 412 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms