RNA–Protein interactions for RNA: ENST00000552541.1

AC090503.2-202, humanhuman

TSL 3

Gene AC090503.2, Length 761 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090503.2-202ENST00000552541 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
AC090503.2-202ENST00000552541 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
AC090503.2-202ENST00000552541 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
AC090503.2-202ENST00000552541 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
AC090503.2-202ENST00000552541 FOXD1Q16676 465 aa22.53■■□□□ 1.2
AC090503.2-202ENST00000552541 MSH5O43196 834 aa21.23■□□□□ 0.99
AC090503.2-202ENST00000552541 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
AC090503.2-202ENST00000552541 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
AC090503.2-202ENST00000552541 PIAS4Q8N2W9 510 aaPredicted RBP21.02■□□□□ 0.96
AC090503.2-202ENST00000552541 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
AC090503.2-202ENST00000552541 ADRA2BP18089 450 aa20.77■□□□□ 0.92
AC090503.2-202ENST00000552541 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
AC090503.2-202ENST00000552541 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
AC090503.2-202ENST00000552541 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
AC090503.2-202ENST00000552541 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
AC090503.2-202ENST00000552541 DCAF8L1A6NGE4 600 aa18.36■□□□□ 0.53
AC090503.2-202ENST00000552541 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
AC090503.2-202ENST00000552541 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
AC090503.2-202ENST00000552541 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
AC090503.2-202ENST00000552541 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
AC090503.2-202ENST00000552541 RNF39Q9H2S5 420 aa18.06■□□□□ 0.48
AC090503.2-202ENST00000552541 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
AC090503.2-202ENST00000552541 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
AC090503.2-202ENST00000552541 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
AC090503.2-202ENST00000552541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.39
AC090503.2-202ENST00000552541 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
AC090503.2-202ENST00000552541 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
AC090503.2-202ENST00000552541 CAPN15O75808 1086 aa16.88■□□□□ 0.29
AC090503.2-202ENST00000552541 KCNA4P22459 653 aa16.87■□□□□ 0.29
AC090503.2-202ENST00000552541 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
AC090503.2-202ENST00000552541 DSG3P32926 999 aa16.82■□□□□ 0.28
AC090503.2-202ENST00000552541 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
AC090503.2-202ENST00000552541 APLP2Q06481 763 aa16.61■□□□□ 0.25
AC090503.2-202ENST00000552541 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
AC090503.2-202ENST00000552541 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
AC090503.2-202ENST00000552541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
AC090503.2-202ENST00000552541 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
AC090503.2-202ENST00000552541 POTEHQ6S545 545 aa16.51■□□□□ 0.23
AC090503.2-202ENST00000552541 ABCB7O75027 752 aa16.46■□□□□ 0.23
AC090503.2-202ENST00000552541 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
AC090503.2-202ENST00000552541 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
AC090503.2-202ENST00000552541 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
AC090503.2-202ENST00000552541 POLA2Q14181 598 aa16.03■□□□□ 0.16
AC090503.2-202ENST00000552541 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
AC090503.2-202ENST00000552541 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
AC090503.2-202ENST00000552541 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
AC090503.2-202ENST00000552541 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
AC090503.2-202ENST00000552541 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
AC090503.2-202ENST00000552541 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
AC090503.2-202ENST00000552541 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
AC090503.2-202ENST00000552541 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
AC090503.2-202ENST00000552541 ZBTB22O15209 634 aa15.48■□□□□ 0.07
AC090503.2-202ENST00000552541 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
AC090503.2-202ENST00000552541 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
AC090503.2-202ENST00000552541 SP7Q8TDD2 431 aaPredicted RBP15.37■□□□□ 0.05
AC090503.2-202ENST00000552541 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
AC090503.2-202ENST00000552541 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
AC090503.2-202ENST00000552541 FBLN2P98095 1184 aa15.23■□□□□ 0.03
AC090503.2-202ENST00000552541 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
AC090503.2-202ENST00000552541 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
AC090503.2-202ENST00000552541 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
AC090503.2-202ENST00000552541 HAX1O00165 279 aa15.18■□□□□ 0.02
AC090503.2-202ENST00000552541 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
AC090503.2-202ENST00000552541 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
AC090503.2-202ENST00000552541 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
AC090503.2-202ENST00000552541 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
AC090503.2-202ENST00000552541 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
AC090503.2-202ENST00000552541 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
AC090503.2-202ENST00000552541 EVX2Q03828 476 aa14.93□□□□□ -0.02
AC090503.2-202ENST00000552541 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.05
AC090503.2-202ENST00000552541 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
AC090503.2-202ENST00000552541 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
AC090503.2-202ENST00000552541 PRR29P0C7W0 189 aa14.69□□□□□ -0.06
AC090503.2-202ENST00000552541 GABBR2O75899 941 aa14.61□□□□□ -0.07
AC090503.2-202ENST00000552541 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
AC090503.2-202ENST00000552541 CD44P16070 742 aaKnown RBP14.47□□□□□ -0.09
AC090503.2-202ENST00000552541 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
AC090503.2-202ENST00000552541 LHX8Q68G74 356 aa14.4□□□□□ -0.1
AC090503.2-202ENST00000552541 CLCN6P51797 869 aa14.33□□□□□ -0.12
AC090503.2-202ENST00000552541 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
AC090503.2-202ENST00000552541 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
AC090503.2-202ENST00000552541 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
AC090503.2-202ENST00000552541 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
AC090503.2-202ENST00000552541 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
AC090503.2-202ENST00000552541 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
AC090503.2-202ENST00000552541 ZRANB1Q9UGI0 708 aa14.22□□□□□ -0.13
AC090503.2-202ENST00000552541 DCBLD2Q96PD2 775 aa14.2□□□□□ -0.14
AC090503.2-202ENST00000552541 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
AC090503.2-202ENST00000552541 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
AC090503.2-202ENST00000552541 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
AC090503.2-202ENST00000552541 PHF12Q96QT6 1004 aa13.99□□□□□ -0.17
AC090503.2-202ENST00000552541 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
AC090503.2-202ENST00000552541 PROM2Q8N271 834 aa13.81□□□□□ -0.2
AC090503.2-202ENST00000552541 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
AC090503.2-202ENST00000552541 POTEB2H3BUK9 544 aa13.8□□□□□ -0.2
AC090503.2-202ENST00000552541 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
AC090503.2-202ENST00000552541 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
AC090503.2-202ENST00000552541 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
AC090503.2-202ENST00000552541 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
AC090503.2-202ENST00000552541 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms