RNA–Protein interactions for RNA: ENST00000552261.1

CR383656.11-201, humanhuman

TSL 3 BASIC

Gene CR383656.11, Length 498 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.11-201ENST00000552261 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
CR383656.11-201ENST00000552261 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
CR383656.11-201ENST00000552261 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
CR383656.11-201ENST00000552261 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
CR383656.11-201ENST00000552261 FOXD1Q16676 465 aa21.73■■□□□ 1.07
CR383656.11-201ENST00000552261 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
CR383656.11-201ENST00000552261 MSH5O43196 834 aa20.45■□□□□ 0.86
CR383656.11-201ENST00000552261 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
CR383656.11-201ENST00000552261 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
CR383656.11-201ENST00000552261 ADRA2BP18089 450 aa20.22■□□□□ 0.83
CR383656.11-201ENST00000552261 POTEDQ86YR6 584 aa19.86■□□□□ 0.77
CR383656.11-201ENST00000552261 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
CR383656.11-201ENST00000552261 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
CR383656.11-201ENST00000552261 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
CR383656.11-201ENST00000552261 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
CR383656.11-201ENST00000552261 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
CR383656.11-201ENST00000552261 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
CR383656.11-201ENST00000552261 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
CR383656.11-201ENST00000552261 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
CR383656.11-201ENST00000552261 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
CR383656.11-201ENST00000552261 CACNB1Q02641 598 aaPredicted RBP17.5■□□□□ 0.39
CR383656.11-201ENST00000552261 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
CR383656.11-201ENST00000552261 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
CR383656.11-201ENST00000552261 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
CR383656.11-201ENST00000552261 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
CR383656.11-201ENST00000552261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
CR383656.11-201ENST00000552261 KCNA4P22459 653 aa16.89■□□□□ 0.29
CR383656.11-201ENST00000552261 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
CR383656.11-201ENST00000552261 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
CR383656.11-201ENST00000552261 CAPN15O75808 1086 aa16.38■□□□□ 0.21
CR383656.11-201ENST00000552261 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
CR383656.11-201ENST00000552261 APLP2Q06481 763 aa16.32■□□□□ 0.2
CR383656.11-201ENST00000552261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
CR383656.11-201ENST00000552261 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
CR383656.11-201ENST00000552261 DSG3P32926 999 aa16.27■□□□□ 0.2
CR383656.11-201ENST00000552261 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
CR383656.11-201ENST00000552261 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
CR383656.11-201ENST00000552261 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
CR383656.11-201ENST00000552261 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
CR383656.11-201ENST00000552261 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
CR383656.11-201ENST00000552261 ABCB7O75027 752 aa15.96■□□□□ 0.15
CR383656.11-201ENST00000552261 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
CR383656.11-201ENST00000552261 POLA2Q14181 598 aa15.66■□□□□ 0.1
CR383656.11-201ENST00000552261 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
CR383656.11-201ENST00000552261 POTEHQ6S545 545 aa15.59■□□□□ 0.09
CR383656.11-201ENST00000552261 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
CR383656.11-201ENST00000552261 ZBTB22O15209 634 aa15.49■□□□□ 0.07
CR383656.11-201ENST00000552261 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
CR383656.11-201ENST00000552261 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
CR383656.11-201ENST00000552261 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
CR383656.11-201ENST00000552261 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
CR383656.11-201ENST00000552261 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
CR383656.11-201ENST00000552261 FBLN2P98095 1184 aa15.06■□□□□ 0
CR383656.11-201ENST00000552261 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
CR383656.11-201ENST00000552261 SPDYE2BA6NHP3 402 aa14.95□□□□□ -0.02
CR383656.11-201ENST00000552261 SPDYE6P0CI01 402 aa14.95□□□□□ -0.02
CR383656.11-201ENST00000552261 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
CR383656.11-201ENST00000552261 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
CR383656.11-201ENST00000552261 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
CR383656.11-201ENST00000552261 PIP4P2Q8N4L2 257 aa14.82□□□□□ -0.04
CR383656.11-201ENST00000552261 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
CR383656.11-201ENST00000552261 FXR2P51116 673 aaKnown RBP eCLIP14.75□□□□□ -0.05
CR383656.11-201ENST00000552261 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
CR383656.11-201ENST00000552261 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
CR383656.11-201ENST00000552261 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
CR383656.11-201ENST00000552261 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
CR383656.11-201ENST00000552261 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
CR383656.11-201ENST00000552261 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
CR383656.11-201ENST00000552261 HAX1O00165 279 aa14.57□□□□□ -0.08
CR383656.11-201ENST00000552261 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
CR383656.11-201ENST00000552261 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
CR383656.11-201ENST00000552261 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
CR383656.11-201ENST00000552261 EVX2Q03828 476 aa14.29□□□□□ -0.12
CR383656.11-201ENST00000552261 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
CR383656.11-201ENST00000552261 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
CR383656.11-201ENST00000552261 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
CR383656.11-201ENST00000552261 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
CR383656.11-201ENST00000552261 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
CR383656.11-201ENST00000552261 GABBR2O75899 941 aa14.06□□□□□ -0.16
CR383656.11-201ENST00000552261 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
CR383656.11-201ENST00000552261 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
CR383656.11-201ENST00000552261 CLCN6P51797 869 aa13.97□□□□□ -0.17
CR383656.11-201ENST00000552261 PROM2Q8N271 834 aa13.85□□□□□ -0.19
CR383656.11-201ENST00000552261 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
CR383656.11-201ENST00000552261 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
CR383656.11-201ENST00000552261 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
CR383656.11-201ENST00000552261 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
CR383656.11-201ENST00000552261 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
CR383656.11-201ENST00000552261 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CR383656.11-201ENST00000552261 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
CR383656.11-201ENST00000552261 LHX8Q68G74 356 aa13.71□□□□□ -0.21
CR383656.11-201ENST00000552261 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
CR383656.11-201ENST00000552261 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
CR383656.11-201ENST00000552261 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
CR383656.11-201ENST00000552261 MIER1Q8N108 512 aa13.53□□□□□ -0.24
CR383656.11-201ENST00000552261 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
CR383656.11-201ENST00000552261 FKBP8Q14318 412 aa13.46□□□□□ -0.25
CR383656.11-201ENST00000552261 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
CR383656.11-201ENST00000552261 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
CR383656.11-201ENST00000552261 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms