RNA–Protein interactions for RNA: ENST00000551749.5

RPL18-212, Transcript of ribosomal protein L18, humanhuman

TSL 2

Gene RPL18, Length 2,091 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18-212ENST00000551749 NISCHQ9Y2I1 1504 aa36.96■■■■□ 3.51
RPL18-212ENST00000551749 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
RPL18-212ENST00000551749 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
RPL18-212ENST00000551749 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
RPL18-212ENST00000551749 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
RPL18-212ENST00000551749 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
RPL18-212ENST00000551749 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
RPL18-212ENST00000551749 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
RPL18-212ENST00000551749 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
RPL18-212ENST00000551749 CHIC1Q5VXU3 224 aa29.4■■■□□ 2.3
RPL18-212ENST00000551749 ABCC9O60706 1549 aa29.39■■■□□ 2.29
RPL18-212ENST00000551749 NACADO15069 1562 aa29.37■■■□□ 2.29
RPL18-212ENST00000551749 RSF1Q96T23 1441 aaPredicted RBP29.07■■■□□ 2.24
RPL18-212ENST00000551749 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
RPL18-212ENST00000551749 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
RPL18-212ENST00000551749 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
RPL18-212ENST00000551749 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
RPL18-212ENST00000551749 WIZO95785 1651 aa28.45■■■□□ 2.14
RPL18-212ENST00000551749 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
RPL18-212ENST00000551749 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
RPL18-212ENST00000551749 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
RPL18-212ENST00000551749 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
RPL18-212ENST00000551749 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
RPL18-212ENST00000551749 PCGF6Q9BYE7 350 aa28.07■■■□□ 2.08
RPL18-212ENST00000551749 BICRAQ9NZM4 1560 aa28.04■■■□□ 2.08
RPL18-212ENST00000551749 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
RPL18-212ENST00000551749 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
RPL18-212ENST00000551749 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
RPL18-212ENST00000551749 HRCP23327 699 aa27.95■■■□□ 2.07
RPL18-212ENST00000551749 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
RPL18-212ENST00000551749 SMARCA2P51531 1590 aa27.91■■■□□ 2.06
RPL18-212ENST00000551749 TRIM26Q12899 539 aaPredicted RBP27.78■■■□□ 2.04
RPL18-212ENST00000551749 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
RPL18-212ENST00000551749 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
RPL18-212ENST00000551749 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
RPL18-212ENST00000551749 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
RPL18-212ENST00000551749 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
RPL18-212ENST00000551749 EEA1Q15075 1411 aa27.4■■□□□ 1.98
RPL18-212ENST00000551749 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.971e-7■■■■■ 66.8
RPL18-212ENST00000551749 SOGA1O94964 1423 aa27.34■■□□□ 1.97
RPL18-212ENST00000551749 CSRNP3Q8WYN3 585 aa27.26■■□□□ 1.95
RPL18-212ENST00000551749 PPARGC1BQ86YN6 1023 aaKnown RBP27.21■■□□□ 1.95
RPL18-212ENST00000551749 TNIKQ9UKE5 1360 aa27.2■■□□□ 1.94
RPL18-212ENST00000551749 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
RPL18-212ENST00000551749 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
RPL18-212ENST00000551749 ZEB1P37275 1124 aaPredicted RBP27.15■■□□□ 1.94
RPL18-212ENST00000551749 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
RPL18-212ENST00000551749 CEP162Q5TB80 1403 aa27.14■■□□□ 1.93
RPL18-212ENST00000551749 NCAPD3P42695 1498 aa27.14■■□□□ 1.93
RPL18-212ENST00000551749 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
RPL18-212ENST00000551749 UBTFP17480 764 aaKnown RBP27.05■■□□□ 1.92
RPL18-212ENST00000551749 CEP164Q9UPV0 1460 aa27■■□□□ 1.91
RPL18-212ENST00000551749 KIF21BO75037 1637 aa26.97■■□□□ 1.91
RPL18-212ENST00000551749 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
RPL18-212ENST00000551749 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.89
RPL18-212ENST00000551749 CFTRP13569 1480 aa26.8■■□□□ 1.88
RPL18-212ENST00000551749 CLIP1P30622 1438 aa26.73■■□□□ 1.87
RPL18-212ENST00000551749 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
RPL18-212ENST00000551749 CUX1P39880 1505 aa26.7■■□□□ 1.87
RPL18-212ENST00000551749 TTBK1Q5TCY1 1321 aaPredicted RBP26.65■■□□□ 1.86
RPL18-212ENST00000551749 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
RPL18-212ENST00000551749 ERICH3Q5RHP9 1530 aa26.62■■□□□ 1.85
RPL18-212ENST00000551749 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
RPL18-212ENST00000551749 PRXQ9BXM0 1461 aa26.59■■□□□ 1.85
RPL18-212ENST00000551749 CCER1Q8TC90 406 aaPredicted RBP26.59■■□□□ 1.85
RPL18-212ENST00000551749 KIF27Q86VH2 1401 aa26.58■■□□□ 1.84
RPL18-212ENST00000551749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.58■■□□□ 1.84
RPL18-212ENST00000551749 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
RPL18-212ENST00000551749 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
RPL18-212ENST00000551749 APLP2Q06481 763 aa26.48■■□□□ 1.83
RPL18-212ENST00000551749 RANGAP1P46060 587 aaPredicted RBP26.42■■□□□ 1.82
RPL18-212ENST00000551749 CUX2O14529 1486 aa26.32■■□□□ 1.8
RPL18-212ENST00000551749 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
RPL18-212ENST00000551749 FGD5Q6ZNL6 1462 aa26.29■■□□□ 1.8
RPL18-212ENST00000551749 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
RPL18-212ENST00000551749 IGF1RP08069 1367 aa26.26■■□□□ 1.79
RPL18-212ENST00000551749 HNRNPUL2Q1KMD3 747 aaKnown RBP26.19■■□□□ 1.78
RPL18-212ENST00000551749 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
RPL18-212ENST00000551749 DNMBPQ6XZF7 1577 aa26.15■■□□□ 1.78
RPL18-212ENST00000551749 ARHGAP35Q9NRY4 1499 aa26.14■■□□□ 1.78
RPL18-212ENST00000551749 TOPBP1Q92547 1522 aa26.07■■□□□ 1.76
RPL18-212ENST00000551749 NESP48681 1621 aa26.06■■□□□ 1.76
RPL18-212ENST00000551749 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
RPL18-212ENST00000551749 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
RPL18-212ENST00000551749 KANK4Q5T7N3 995 aaPredicted RBP26.03■■□□□ 1.76
RPL18-212ENST00000551749 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
RPL18-212ENST00000551749 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
RPL18-212ENST00000551749 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
RPL18-212ENST00000551749 MAP3K1Q13233 1512 aa25.91■■□□□ 1.74
RPL18-212ENST00000551749 CUL7Q14999 1698 aa25.89■■□□□ 1.74
RPL18-212ENST00000551749 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
RPL18-212ENST00000551749 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
RPL18-212ENST00000551749 DIEXFQ68CQ4 756 aaKnown RBP25.87■■□□□ 1.73
RPL18-212ENST00000551749 FHAD1B1AJZ9 1412 aa25.86■■□□□ 1.73
RPL18-212ENST00000551749 TIAM1Q13009 1591 aa25.84■■□□□ 1.73
RPL18-212ENST00000551749 ZNF316A6NFI3 1004 aaPredicted RBP25.83■■□□□ 1.72
RPL18-212ENST00000551749 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
RPL18-212ENST00000551749 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
RPL18-212ENST00000551749 CLSPNQ9HAW4 1339 aa25.8■■□□□ 1.72
RPL18-212ENST00000551749 EFCAB5A4FU69 1503 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms