RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	SLC24A1	O60721	1099 aa		7.68	□□□□□ -1.18
CNOT2-231	ENST00000551483	CHIC1	Q5VXU3	224 aa		7.38	□□□□□ -1.23
CNOT2-231	ENST00000551483	AEBP2	Q6ZN18	517 aa	Predicted RBP	7.26	□□□□□ -1.25
CNOT2-231	ENST00000551483	MYT1	Q01538	1121 aa		7.21	□□□□□ -1.26
CNOT2-231	ENST00000551483	PELP1	Q8IZL8	1130 aa	Known RBP	7.09	□□□□□ -1.27
CNOT2-231	ENST00000551483	EHMT2	Q96KQ7	1210 aa		7.06	□□□□□ -1.28
CNOT2-231	ENST00000551483	TTBK1	Q5TCY1	1321 aa	Predicted RBP	7.06	□□□□□ -1.28
CNOT2-231	ENST00000551483	DAXX	Q9UER7	740 aa	Predicted RBP	7.03	□□□□□ -1.28
CNOT2-231	ENST00000551483	ERICH6	Q7L0X2	663 aa		6.97	□□□□□ -1.29
CNOT2-231	ENST00000551483	PRKCSH	P14314	528 aa	Predicted RBP	6.93	□□□□□ -1.3
CNOT2-231	ENST00000551483	PLPPR3	Q6T4P5	718 aa		6.85	□□□□□ -1.31
CNOT2-231	ENST00000551483	APLP2	Q06481	763 aa		6.81	□□□□□ -1.32
CNOT2-231	ENST00000551483	RTN4	Q9NQC3	1192 aa	Known RBP	6.8	□□□□□ -1.32
CNOT2-231	ENST00000551483	NCBP3	Q53F19	620 aa	Known RBP	6.76	□□□□□ -1.33
CNOT2-231	ENST00000551483	RANGAP1	P46060	587 aa	Predicted RBP	6.65	□□□□□ -1.35
CNOT2-231	ENST00000551483	EIF5B	O60841	1220 aa	Known RBP	6.61	□□□□□ -1.35
CNOT2-231	ENST00000551483	AMER1	Q5JTC6	1135 aa	Predicted RBP	6.57	□□□□□ -1.36
CNOT2-231	ENST00000551483	ARX	Q96QS3	562 aa		6.55	□□□□□ -1.36
CNOT2-231	ENST00000551483	TIMELESS	Q9UNS1	1208 aa		6.53	□□□□□ -1.36
CNOT2-231	ENST00000551483	SENP3	Q9H4L4	574 aa	Predicted RBP	6.52	□□□□□ -1.37
CNOT2-231	ENST00000551483	TULP1	O00294	542 aa	Predicted RBP	6.49	□□□□□ -1.37
CNOT2-231	ENST00000551483	PHF23	Q9BUL5	403 aa	Predicted RBP	6.46	□□□□□ -1.38
CNOT2-231	ENST00000551483	KCNA4	P22459	653 aa		6.45	□□□□□ -1.38
CNOT2-231	ENST00000551483	KLHL34	Q8N239	644 aa		6.43	□□□□□ -1.38
CNOT2-231	ENST00000551483	HOMEZ	Q8IX15	550 aa		6.42	□□□□□ -1.38
CNOT2-231	ENST00000551483	PODXL2	Q9NZ53	605 aa		6.4	□□□□□ -1.39
CNOT2-231	ENST00000551483	BCL11A	Q9H165	835 aa		6.37	□□□□□ -1.39
CNOT2-231	ENST00000551483	PLEKHG5	O94827	1062 aa		6.37	□□□□□ -1.39
CNOT2-231	ENST00000551483	TAOK2	Q9UL54	1235 aa		6.34	□□□□□ -1.39
CNOT2-231	ENST00000551483	TPRN	Q4KMQ1	711 aa		6.33	□□□□□ -1.4
CNOT2-231	ENST00000551483	CSRNP3	Q8WYN3	585 aa		6.32	□□□□□ -1.4
CNOT2-231	ENST00000551483	BCAN	Q96GW7	911 aa		6.25	□□□□□ -1.41
CNOT2-231	ENST00000551483	NPM2	Q86SE8	214 aa	Known RBP	6.25	□□□□□ -1.41
CNOT2-231	ENST00000551483	C14orf37	Q86TY3	774 aa		6.22	□□□□□ -1.41
CNOT2-231	ENST00000551483	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.19	□□□□□ -1.42
CNOT2-231	ENST00000551483	GTF3C3	Q9Y5Q9	886 aa		6.19	□□□□□ -1.42
CNOT2-231	ENST00000551483	HAP1	P54257	671 aa	Predicted RBP	6.17	□□□□□ -1.42
CNOT2-231	ENST00000551483	PDIA4	P13667	645 aa	Known RBP	6.1	□□□□□ -1.43
CNOT2-231	ENST00000551483	DCAF8L2	P0C7V8	631 aa		6.07	□□□□□ -1.44
CNOT2-231	ENST00000551483	SUPT5H	O00267	1087 aa	Known RBP	6.06	□□□□□ -1.44
CNOT2-231	ENST00000551483	PLCB2	Q00722	1185 aa		6.06	□□□□□ -1.44
CNOT2-231	ENST00000551483	PDE4C	Q08493	712 aa		6.03	□□□□□ -1.44
CNOT2-231	ENST00000551483	TRIM26	Q12899	539 aa	Predicted RBP	6.03	□□□□□ -1.44
CNOT2-231	ENST00000551483	NEFL	P07196	543 aa		6.02	□□□□□ -1.45
CNOT2-231	ENST00000551483	FBXO3	Q9UK99	471 aa		6.02	□□□□□ -1.45
CNOT2-231	ENST00000551483	TMEM132A	Q24JP5	1023 aa		6.01	□□□□□ -1.45
CNOT2-231	ENST00000551483	UBE2Q2	Q8WVN8	375 aa		6	□□□□□ -1.45
CNOT2-231	ENST00000551483	SLC4A1AP	Q9BWU0	796 aa	Known RBP	6	□□□□□ -1.45
CNOT2-231	ENST00000551483	CHMP4A	Q9BY43	222 aa		5.99	□□□□□ -1.45
CNOT2-231	ENST00000551483	LOC105371045	A0A1W2PR82	267 aa		5.99	□□□□□ -1.45
CNOT2-231	ENST00000551483	CDK11B	P21127	795 aa	Known RBP	5.98	□□□□□ -1.45
CNOT2-231	ENST00000551483	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.98	□□□□□ -1.45
CNOT2-231	ENST00000551483	PKNOX2	Q96KN3	472 aa		5.97	□□□□□ -1.45
CNOT2-231	ENST00000551483	DHX37	Q8IY37	1157 aa	Known RBP	5.96	□□□□□ -1.46
CNOT2-231	ENST00000551483	CENPB	P07199	599 aa	Predicted RBP	5.95	□□□□□ -1.46
CNOT2-231	ENST00000551483	UBTF	P17480	764 aa	Known RBP	5.93	□□□□□ -1.46
CNOT2-231	ENST00000551483	POLR3GL	Q9BT43	218 aa		5.93	□□□□□ -1.46
CNOT2-231	ENST00000551483	TAF7L	Q5H9L4	462 aa		5.9	□□□□□ -1.46
CNOT2-231	ENST00000551483	ADRA2B	P18089	450 aa		5.9	□□□□□ -1.47
CNOT2-231	ENST00000551483	PIAS4	Q8N2W9	510 aa	Predicted RBP	5.9	□□□□□ -1.47
CNOT2-231	ENST00000551483	BRD2	P25440	801 aa	Known RBP	5.89	□□□□□ -1.47
CNOT2-231	ENST00000551483	POTED	Q86YR6	584 aa		5.89	□□□□□ -1.47
CNOT2-231	ENST00000551483	SAMD1	Q6SPF0	538 aa	Predicted RBP	5.87	□□□□□ -1.47
CNOT2-231	ENST00000551483	HRC	P23327	699 aa		5.87	□□□□□ -1.47
CNOT2-231	ENST00000551483	BCL11B	Q9C0K0	894 aa	Predicted RBP	5.87	□□□□□ -1.47
CNOT2-231	ENST00000551483	FOXD1	Q16676	465 aa		5.84	□□□□□ -1.47
CNOT2-231	ENST00000551483	CFAP44	Q96MT7	982 aa		5.83	□□□□□ -1.48
CNOT2-231	ENST00000551483	CCDC136	Q96JN2	1154 aa		5.82	□□□□□ -1.48
CNOT2-231	ENST00000551483	CNKSR2	Q8WXI2	1034 aa		5.82	□□□□□ -1.48
CNOT2-231	ENST00000551483	ANO8	Q9HCE9	1232 aa	Predicted RBP	5.82	□□□□□ -1.48
CNOT2-231	ENST00000551483	VSIG10	Q8N0Z9	540 aa		5.81	□□□□□ -1.48
CNOT2-231	ENST00000551483	HSP90B1	P14625	803 aa	Known RBP	5.8	□□□□□ -1.48
CNOT2-231	ENST00000551483	ZEB1	P37275	1124 aa	Predicted RBP	5.8	□□□□□ -1.48
CNOT2-231	ENST00000551483	FBLN2	P98095	1184 aa		5.79	□□□□□ -1.48
CNOT2-231	ENST00000551483		A0A0U1RQG5	324 aa	Predicted RBP	5.78	□□□□□ -1.48
CNOT2-231	ENST00000551483	KDM2A	Q9Y2K7	1162 aa		5.78	□□□□□ -1.48
CNOT2-231	ENST00000551483	IGSF3	O75054	1194 aa		5.78	□□□□□ -1.48
CNOT2-231	ENST00000551483	FKBP8	Q14318	412 aa		5.78	□□□□□ -1.48
CNOT2-231	ENST00000551483	HMGB1	P09429	215 aa	Known RBP	5.77	□□□□□ -1.49
CNOT2-231	ENST00000551483	SHROOM4	Q9ULL8	1493 aa		5.77	□□□□□ -1.49
CNOT2-231	ENST00000551483	FGD1	P98174	961 aa		5.77	□□□□□ -1.49
CNOT2-231	ENST00000551483	ARID3A	Q99856	593 aa		5.77	□□□□□ -1.49
CNOT2-231	ENST00000551483	SCAF1	Q9H7N4	1312 aa	Known RBP	5.77	□□□□□ -1.49
CNOT2-231	ENST00000551483	IRX6	P78412	446 aa	Predicted RBP	5.75	□□□□□ -1.49
CNOT2-231	ENST00000551483	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.74	□□□□□ -1.49
CNOT2-231	ENST00000551483	PPP6R1	Q9UPN7	881 aa		5.74	□□□□□ -1.49
CNOT2-231	ENST00000551483	ZNF326	Q5BKZ1	582 aa	Known RBP	5.73	□□□□□ -1.49
CNOT2-231	ENST00000551483	CCDC9	Q9Y3X0	531 aa	Known RBP	5.73	□□□□□ -1.49
CNOT2-231	ENST00000551483	ANP32E	Q9BTT0	268 aa		5.71	□□□□□ -1.49
CNOT2-231	ENST00000551483	NAP1L5	Q96NT1	182 aa	Predicted RBP	5.71	□□□□□ -1.5
CNOT2-231	ENST00000551483	ZBTB22	O15209	634 aa		5.69	□□□□□ -1.5
CNOT2-231	ENST00000551483	CLSPN	Q9HAW4	1339 aa		5.68	□□□□□ -1.5
CNOT2-231	ENST00000551483	NBR1	Q14596	966 aa		5.68	□□□□□ -1.5
CNOT2-231	ENST00000551483	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
CNOT2-231	ENST00000551483	DCAF8L1	A6NGE4	600 aa		5.66	□□□□□ -1.5
CNOT2-231	ENST00000551483	ZBTB7C	A1YPR0	619 aa		5.64	□□□□□ -1.51
CNOT2-231	ENST00000551483	GLIPR1L2	Q4G1C9	344 aa		5.64	□□□□□ -1.51
CNOT2-231	ENST00000551483	RSPH4A	Q5TD94	716 aa		5.62	□□□□□ -1.51
CNOT2-231	ENST00000551483	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
CNOT2-231	ENST00000551483	AAMP	Q13685	434 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms