RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 AEBP2Q6ZN18 517 aaPredicted RBP30.14■■■□□ 2.42
AL355112.1-201ENST00000550309 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
AL355112.1-201ENST00000550309 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
AL355112.1-201ENST00000550309 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
AL355112.1-201ENST00000550309 FOXD1Q16676 465 aa23.99■■□□□ 1.43
AL355112.1-201ENST00000550309 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
AL355112.1-201ENST00000550309 MSH5O43196 834 aa22.49■■□□□ 1.19
AL355112.1-201ENST00000550309 PIAS4Q8N2W9 510 aaPredicted RBP22.38■■□□□ 1.17
AL355112.1-201ENST00000550309 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
AL355112.1-201ENST00000550309 ADRA2BP18089 450 aa22.25■■□□□ 1.15
AL355112.1-201ENST00000550309 POTEDQ86YR6 584 aa22.21■■□□□ 1.15
AL355112.1-201ENST00000550309 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
AL355112.1-201ENST00000550309 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
AL355112.1-201ENST00000550309 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
AL355112.1-201ENST00000550309 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
AL355112.1-201ENST00000550309 DCAF8L1A6NGE4 600 aa19.56■□□□□ 0.72
AL355112.1-201ENST00000550309 HOXD11P31277 338 aaPredicted RBP19.56■□□□□ 0.72
AL355112.1-201ENST00000550309 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
AL355112.1-201ENST00000550309 CACNB1Q02641 598 aaPredicted RBP19.4■□□□□ 0.7
AL355112.1-201ENST00000550309 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
AL355112.1-201ENST00000550309 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
AL355112.1-201ENST00000550309 NCBP3Q53F19 620 aaKnown RBP19.05■□□□□ 0.64
AL355112.1-201ENST00000550309 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
AL355112.1-201ENST00000550309 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
AL355112.1-201ENST00000550309 NPM3O75607 178 aaKnown RBP18.78■□□□□ 0.6
AL355112.1-201ENST00000550309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
AL355112.1-201ENST00000550309 KCNA4P22459 653 aa18.3■□□□□ 0.52
AL355112.1-201ENST00000550309 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
AL355112.1-201ENST00000550309 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
AL355112.1-201ENST00000550309 CAPN15O75808 1086 aa18■□□□□ 0.47
AL355112.1-201ENST00000550309 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
AL355112.1-201ENST00000550309 DSG3P32926 999 aa17.92■□□□□ 0.46
AL355112.1-201ENST00000550309 APLP2Q06481 763 aa17.69■□□□□ 0.42
AL355112.1-201ENST00000550309 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
AL355112.1-201ENST00000550309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
AL355112.1-201ENST00000550309 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
AL355112.1-201ENST00000550309 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
AL355112.1-201ENST00000550309 ABCB7O75027 752 aa17.58■□□□□ 0.4
AL355112.1-201ENST00000550309 SAMD1Q6SPF0 538 aaPredicted RBP17.56■□□□□ 0.4
AL355112.1-201ENST00000550309 POTEHQ6S545 545 aa17.38■□□□□ 0.37
AL355112.1-201ENST00000550309 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
AL355112.1-201ENST00000550309 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
AL355112.1-201ENST00000550309 POLA2Q14181 598 aa17.17■□□□□ 0.34
AL355112.1-201ENST00000550309 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
AL355112.1-201ENST00000550309 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
AL355112.1-201ENST00000550309 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
AL355112.1-201ENST00000550309 ZBTB22O15209 634 aa16.83■□□□□ 0.28
AL355112.1-201ENST00000550309 CHRDL2Q6WN34 429 aa16.79■□□□□ 0.28
AL355112.1-201ENST00000550309 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
AL355112.1-201ENST00000550309 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
AL355112.1-201ENST00000550309 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
AL355112.1-201ENST00000550309 ATXN8OSP0DMR3 200 aa16.59■□□□□ 0.25
AL355112.1-201ENST00000550309 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
AL355112.1-201ENST00000550309 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
AL355112.1-201ENST00000550309 PIP4P2Q8N4L2 257 aa16.36■□□□□ 0.21
AL355112.1-201ENST00000550309 FBLN2P98095 1184 aa16.33■□□□□ 0.2
AL355112.1-201ENST00000550309 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
AL355112.1-201ENST00000550309 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
AL355112.1-201ENST00000550309 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
AL355112.1-201ENST00000550309 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
AL355112.1-201ENST00000550309 SP7Q8TDD2 431 aaPredicted RBP16.23■□□□□ 0.19
AL355112.1-201ENST00000550309 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
AL355112.1-201ENST00000550309 HAX1O00165 279 aa16.11■□□□□ 0.17
AL355112.1-201ENST00000550309 ZNF692Q9BU19 519 aaPredicted RBP16.06■□□□□ 0.16
AL355112.1-201ENST00000550309 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
AL355112.1-201ENST00000550309 SPDYE1Q8NFV5 336 aaPredicted RBP16.02■□□□□ 0.16
AL355112.1-201ENST00000550309 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
AL355112.1-201ENST00000550309 PRKAR2AP13861 404 aaKnown RBP15.93■□□□□ 0.14
AL355112.1-201ENST00000550309 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
AL355112.1-201ENST00000550309 EVX2Q03828 476 aa15.9■□□□□ 0.14
AL355112.1-201ENST00000550309 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
AL355112.1-201ENST00000550309 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
AL355112.1-201ENST00000550309 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
AL355112.1-201ENST00000550309 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
AL355112.1-201ENST00000550309 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
AL355112.1-201ENST00000550309 GABBR2O75899 941 aa15.53■□□□□ 0.08
AL355112.1-201ENST00000550309 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
AL355112.1-201ENST00000550309 CD44P16070 742 aaKnown RBP15.42■□□□□ 0.06
AL355112.1-201ENST00000550309 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
AL355112.1-201ENST00000550309 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
AL355112.1-201ENST00000550309 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
AL355112.1-201ENST00000550309 LHX8Q68G74 356 aa15.22■□□□□ 0.03
AL355112.1-201ENST00000550309 CLCN6P51797 869 aa15.21■□□□□ 0.03
AL355112.1-201ENST00000550309 POTEIP0CG38 1075 aa15.2■□□□□ 0.02
AL355112.1-201ENST00000550309 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
AL355112.1-201ENST00000550309 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
AL355112.1-201ENST00000550309 DCBLD2Q96PD2 775 aa15.08■□□□□ 0
AL355112.1-201ENST00000550309 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
AL355112.1-201ENST00000550309 PAK3O75914 559 aaPredicted RBP15.01□□□□□ -0.01
AL355112.1-201ENST00000550309 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
AL355112.1-201ENST00000550309 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
AL355112.1-201ENST00000550309 PROM2Q8N271 834 aa14.97□□□□□ -0.01
AL355112.1-201ENST00000550309 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
AL355112.1-201ENST00000550309 MS4A3Q96HJ5 214 aa14.75□□□□□ -0.05
AL355112.1-201ENST00000550309 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
AL355112.1-201ENST00000550309 PELP1Q8IZL8 1130 aaKnown RBP14.73□□□□□ -0.05
AL355112.1-201ENST00000550309 POTEB2H3BUK9 544 aa14.71□□□□□ -0.05
AL355112.1-201ENST00000550309 CCDC61Q9Y6R9 512 aa14.69□□□□□ -0.06
AL355112.1-201ENST00000550309 ASTLQ6HA08 431 aaPredicted RBP14.67□□□□□ -0.06
AL355112.1-201ENST00000550309 MIER1Q8N108 512 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms