RNA–Protein interactions for RNA: ENST00000550088.1

AC016257.1-201, humanhuman

TSL 2 BASIC

Gene AC016257.1, Length 641 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016257.1-201ENST00000550088 AEBP2Q6ZN18 517 aaPredicted RBP31.42■■■□□ 2.62
AC016257.1-201ENST00000550088 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
AC016257.1-201ENST00000550088 PHF23Q9BUL5 403 aaPredicted RBP27.32■■□□□ 1.96
AC016257.1-201ENST00000550088 SENP3Q9H4L4 574 aaPredicted RBP26.7■■□□□ 1.86
AC016257.1-201ENST00000550088 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
AC016257.1-201ENST00000550088 FOXD1Q16676 465 aa24.67■■□□□ 1.54
AC016257.1-201ENST00000550088 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
AC016257.1-201ENST00000550088 ADRA2BP18089 450 aa23.96■■□□□ 1.43
AC016257.1-201ENST00000550088 PIAS4Q8N2W9 510 aaPredicted RBP23.35■■□□□ 1.33
AC016257.1-201ENST00000550088 MSH5O43196 834 aa22.69■■□□□ 1.22
AC016257.1-201ENST00000550088 PPP4R3CPQ6ZMV5 832 aa22.41■■□□□ 1.18
AC016257.1-201ENST00000550088 KCNA4P22459 653 aa22.23■■□□□ 1.15
AC016257.1-201ENST00000550088 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
AC016257.1-201ENST00000550088 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
AC016257.1-201ENST00000550088 CNKSR2Q8WXI2 1034 aa21.75■■□□□ 1.07
AC016257.1-201ENST00000550088 MAPK8IP2Q13387 824 aaPredicted RBP21.62■■□□□ 1.05
AC016257.1-201ENST00000550088 NPM3O75607 178 aaKnown RBP21.58■■□□□ 1.05
AC016257.1-201ENST00000550088 DMRT2Q9Y5R5 561 aa21.35■■□□□ 1.01
AC016257.1-201ENST00000550088 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
AC016257.1-201ENST00000550088 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
AC016257.1-201ENST00000550088 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
AC016257.1-201ENST00000550088 HOXD11P31277 338 aaPredicted RBP21.07■□□□□ 0.96
AC016257.1-201ENST00000550088 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
AC016257.1-201ENST00000550088 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
AC016257.1-201ENST00000550088 ZBTB22O15209 634 aa20.44■□□□□ 0.86
AC016257.1-201ENST00000550088 FOXD4L1Q9NU39 408 aa20.42■□□□□ 0.86
AC016257.1-201ENST00000550088 DCAF8L1A6NGE4 600 aa20.31■□□□□ 0.84
AC016257.1-201ENST00000550088 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
AC016257.1-201ENST00000550088 POTEDQ86YR6 584 aa20.1■□□□□ 0.81
AC016257.1-201ENST00000550088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.8
AC016257.1-201ENST00000550088 MYCNP04198 464 aaPredicted RBP19.99■□□□□ 0.79
AC016257.1-201ENST00000550088 ATXN8OSP0DMR3 200 aa19.75■□□□□ 0.75
AC016257.1-201ENST00000550088 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
AC016257.1-201ENST00000550088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.71■□□□□ 0.75
AC016257.1-201ENST00000550088 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
AC016257.1-201ENST00000550088 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
AC016257.1-201ENST00000550088 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
AC016257.1-201ENST00000550088 APLP2Q06481 763 aa19.44■□□□□ 0.7
AC016257.1-201ENST00000550088 ATF5Q9Y2D1 282 aaPredicted RBP19.32■□□□□ 0.68
AC016257.1-201ENST00000550088 C1QBPQ07021 282 aaKnown RBP19.28■□□□□ 0.68
AC016257.1-201ENST00000550088 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
AC016257.1-201ENST00000550088 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
AC016257.1-201ENST00000550088 CAPN15O75808 1086 aa18.97■□□□□ 0.63
AC016257.1-201ENST00000550088 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
AC016257.1-201ENST00000550088 POLA2Q14181 598 aa18.75■□□□□ 0.59
AC016257.1-201ENST00000550088 CACNB1Q02641 598 aaPredicted RBP18.66■□□□□ 0.58
AC016257.1-201ENST00000550088 FKBP8Q14318 412 aa18.62■□□□□ 0.57
AC016257.1-201ENST00000550088 DSG3P32926 999 aa18.61■□□□□ 0.57
AC016257.1-201ENST00000550088 ABCB7O75027 752 aa18.59■□□□□ 0.57
AC016257.1-201ENST00000550088 FBLN2P98095 1184 aa18.59■□□□□ 0.57
AC016257.1-201ENST00000550088 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
AC016257.1-201ENST00000550088 MKRN4PQ13434 485 aaPredicted RBP18.54■□□□□ 0.56
AC016257.1-201ENST00000550088 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
AC016257.1-201ENST00000550088 PROM2Q8N271 834 aa18.13■□□□□ 0.49
AC016257.1-201ENST00000550088 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
AC016257.1-201ENST00000550088 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
AC016257.1-201ENST00000550088 SPDYE2Q495Y8 402 aa18.07■□□□□ 0.48
AC016257.1-201ENST00000550088 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
AC016257.1-201ENST00000550088 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
AC016257.1-201ENST00000550088 FBXO3Q9UK99 471 aa17.98■□□□□ 0.47
AC016257.1-201ENST00000550088 SSUH2Q9Y2M2 353 aa17.95■□□□□ 0.46
AC016257.1-201ENST00000550088 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
AC016257.1-201ENST00000550088 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
AC016257.1-201ENST00000550088 VASPP50552 380 aaPredicted RBP17.66■□□□□ 0.42
AC016257.1-201ENST00000550088 AMER1Q5JTC6 1135 aaPredicted RBP17.65■□□□□ 0.42
AC016257.1-201ENST00000550088 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
AC016257.1-201ENST00000550088 STAG3Q9UJ98 1225 aa17.63■□□□□ 0.41
AC016257.1-201ENST00000550088 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
AC016257.1-201ENST00000550088 SPDYE1Q8NFV5 336 aaPredicted RBP17.44■□□□□ 0.38
AC016257.1-201ENST00000550088 IFNLR1Q8IU57 520 aaPredicted RBP17.42■□□□□ 0.38
AC016257.1-201ENST00000550088 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
AC016257.1-201ENST00000550088 PLCD3Q8N3E9 789 aa17.33■□□□□ 0.36
AC016257.1-201ENST00000550088 MIER1Q8N108 512 aa17.32■□□□□ 0.36
AC016257.1-201ENST00000550088 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
AC016257.1-201ENST00000550088 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
AC016257.1-201ENST00000550088 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
AC016257.1-201ENST00000550088 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
AC016257.1-201ENST00000550088 ZBTB47Q9UFB7 747 aaPredicted RBP17.21■□□□□ 0.35
AC016257.1-201ENST00000550088 SPOCK2Q92563 424 aa17.19■□□□□ 0.34
AC016257.1-201ENST00000550088 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
AC016257.1-201ENST00000550088 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
AC016257.1-201ENST00000550088 PKD2Q13563 968 aa16.97■□□□□ 0.31
AC016257.1-201ENST00000550088 MNX1P50219 401 aaPredicted RBP16.94■□□□□ 0.3
AC016257.1-201ENST00000550088 NUBP1P53384 320 aa16.86■□□□□ 0.29
AC016257.1-201ENST00000550088 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
AC016257.1-201ENST00000550088 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC016257.1-201ENST00000550088 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC016257.1-201ENST00000550088 GSE1Q14687 1217 aa16.81■□□□□ 0.28
AC016257.1-201ENST00000550088 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
AC016257.1-201ENST00000550088 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
AC016257.1-201ENST00000550088 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
AC016257.1-201ENST00000550088 CHADLQ6NUI6 762 aa16.77■□□□□ 0.28
AC016257.1-201ENST00000550088 PRKAR2AP13861 404 aaKnown RBP16.76■□□□□ 0.27
AC016257.1-201ENST00000550088 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
AC016257.1-201ENST00000550088 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
AC016257.1-201ENST00000550088 DCAF8Q5TAQ9 597 aa16.7■□□□□ 0.26
AC016257.1-201ENST00000550088 PIP4P2Q8N4L2 257 aa16.7■□□□□ 0.26
AC016257.1-201ENST00000550088 RASEFQ8IZ41 740 aa16.67■□□□□ 0.26
AC016257.1-201ENST00000550088 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
AC016257.1-201ENST00000550088 RGL2O15211 777 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms