RNA–Protein interactions for RNA: ENST00000549882.1

SENP1-206, Transcript of SUMO specific peptidase 1, humanhuman

TSL 3

Gene SENP1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP1-206ENST00000549882 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
SENP1-206ENST00000549882 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
SENP1-206ENST00000549882 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
SENP1-206ENST00000549882 PHF23Q9BUL5 403 aaPredicted RBP23.44■■□□□ 1.34
SENP1-206ENST00000549882 FOXD1Q16676 465 aa22.14■■□□□ 1.13
SENP1-206ENST00000549882 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
SENP1-206ENST00000549882 MSH5O43196 834 aa20.75■□□□□ 0.91
SENP1-206ENST00000549882 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
SENP1-206ENST00000549882 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
SENP1-206ENST00000549882 ADRA2BP18089 450 aa20.63■□□□□ 0.89
SENP1-206ENST00000549882 POTEDQ86YR6 584 aa20.32■□□□□ 0.84
SENP1-206ENST00000549882 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
SENP1-206ENST00000549882 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
SENP1-206ENST00000549882 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
SENP1-206ENST00000549882 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
SENP1-206ENST00000549882 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
SENP1-206ENST00000549882 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
SENP1-206ENST00000549882 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
SENP1-206ENST00000549882 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
SENP1-206ENST00000549882 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
SENP1-206ENST00000549882 NCBP3Q53F19 620 aaKnown RBP17.77■□□□□ 0.44
SENP1-206ENST00000549882 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
SENP1-206ENST00000549882 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
SENP1-206ENST00000549882 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
SENP1-206ENST00000549882 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
SENP1-206ENST00000549882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
SENP1-206ENST00000549882 KCNA4P22459 653 aa17.14■□□□□ 0.33
SENP1-206ENST00000549882 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
SENP1-206ENST00000549882 CAPN15O75808 1086 aa16.7■□□□□ 0.26
SENP1-206ENST00000549882 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
SENP1-206ENST00000549882 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
SENP1-206ENST00000549882 DSG3P32926 999 aa16.56■□□□□ 0.24
SENP1-206ENST00000549882 APLP2Q06481 763 aa16.46■□□□□ 0.23
SENP1-206ENST00000549882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
SENP1-206ENST00000549882 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
SENP1-206ENST00000549882 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
SENP1-206ENST00000549882 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
SENP1-206ENST00000549882 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
SENP1-206ENST00000549882 ABCB7O75027 752 aa16.3■□□□□ 0.2
SENP1-206ENST00000549882 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
SENP1-206ENST00000549882 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
SENP1-206ENST00000549882 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
SENP1-206ENST00000549882 POLA2Q14181 598 aa15.95■□□□□ 0.14
SENP1-206ENST00000549882 POTEHQ6S545 545 aa15.93■□□□□ 0.14
SENP1-206ENST00000549882 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
SENP1-206ENST00000549882 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
SENP1-206ENST00000549882 ZBTB22O15209 634 aa15.73■□□□□ 0.11
SENP1-206ENST00000549882 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
SENP1-206ENST00000549882 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
SENP1-206ENST00000549882 CHRDL2Q6WN34 429 aa15.49■□□□□ 0.07
SENP1-206ENST00000549882 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
SENP1-206ENST00000549882 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
SENP1-206ENST00000549882 ABCC9O60706 1549 aa15.32■□□□□ 0.04
SENP1-206ENST00000549882 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
SENP1-206ENST00000549882 FBLN2P98095 1184 aa15.24■□□□□ 0.03
SENP1-206ENST00000549882 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
SENP1-206ENST00000549882 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
SENP1-206ENST00000549882 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
SENP1-206ENST00000549882 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
SENP1-206ENST00000549882 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
SENP1-206ENST00000549882 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
SENP1-206ENST00000549882 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
SENP1-206ENST00000549882 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.01
SENP1-206ENST00000549882 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
SENP1-206ENST00000549882 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
SENP1-206ENST00000549882 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
SENP1-206ENST00000549882 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
SENP1-206ENST00000549882 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
SENP1-206ENST00000549882 HAX1O00165 279 aa14.89□□□□□ -0.03
SENP1-206ENST00000549882 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
SENP1-206ENST00000549882 SPDYE1Q8NFV5 336 aaPredicted RBP14.88□□□□□ -0.03
SENP1-206ENST00000549882 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
SENP1-206ENST00000549882 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
SENP1-206ENST00000549882 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
SENP1-206ENST00000549882 EVX2Q03828 476 aa14.64□□□□□ -0.07
SENP1-206ENST00000549882 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
SENP1-206ENST00000549882 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
SENP1-206ENST00000549882 C19orf67A6NJJ6 358 aa14.5□□□□□ -0.09
SENP1-206ENST00000549882 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
SENP1-206ENST00000549882 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
SENP1-206ENST00000549882 GABBR2O75899 941 aa14.32□□□□□ -0.12
SENP1-206ENST00000549882 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
SENP1-206ENST00000549882 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
SENP1-206ENST00000549882 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
SENP1-206ENST00000549882 ZRANB1Q9UGI0 708 aa14.1□□□□□ -0.15
SENP1-206ENST00000549882 CLCN6P51797 869 aa14.06□□□□□ -0.16
SENP1-206ENST00000549882 ZNF579Q8NAF0 562 aaKnown RBP14.04□□□□□ -0.16
SENP1-206ENST00000549882 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
SENP1-206ENST00000549882 PAK3O75914 559 aaPredicted RBP13.99□□□□□ -0.17
SENP1-206ENST00000549882 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
SENP1-206ENST00000549882 LHX8Q68G74 356 aa13.99□□□□□ -0.17
SENP1-206ENST00000549882 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
SENP1-206ENST00000549882 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
SENP1-206ENST00000549882 PROM2Q8N271 834 aa13.95□□□□□ -0.18
SENP1-206ENST00000549882 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
SENP1-206ENST00000549882 RB1CC1Q8TDY2 1594 aa13.94□□□□□ -0.18
SENP1-206ENST00000549882 GALR2O43603 387 aaPredicted RBP13.89□□□□□ -0.19
SENP1-206ENST00000549882 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
SENP1-206ENST00000549882 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
SENP1-206ENST00000549882 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms