RNA–Protein interactions for RNA: ENST00000546904.1

PPP1CC-203, Transcript of protein phosphatase 1 catalytic subunit gamma, humanhuman

TSL 2

Gene PPP1CC, Length 1,133 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CC-203ENST00000546904 AEBP2Q6ZN18 517 aaPredicted RBP28.78■■■□□ 2.2
PPP1CC-203ENST00000546904 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
PPP1CC-203ENST00000546904 SENP3Q9H4L4 574 aaPredicted RBP24.72■■□□□ 1.55
PPP1CC-203ENST00000546904 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
PPP1CC-203ENST00000546904 FOXD1Q16676 465 aa22.97■■□□□ 1.27
PPP1CC-203ENST00000546904 PLPPR3Q6T4P5 718 aa21.77■■□□□ 1.08
PPP1CC-203ENST00000546904 MSH5O43196 834 aa21.67■■□□□ 1.06
PPP1CC-203ENST00000546904 PIAS4Q8N2W9 510 aaPredicted RBP21.49■■□□□ 1.03
PPP1CC-203ENST00000546904 POTEDQ86YR6 584 aa21.34■■□□□ 1.01
PPP1CC-203ENST00000546904 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
PPP1CC-203ENST00000546904 ADRA2BP18089 450 aa21.27■■□□□ 1
PPP1CC-203ENST00000546904 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
PPP1CC-203ENST00000546904 MAPK8IP2Q13387 824 aaPredicted RBP19.58■□□□□ 0.72
PPP1CC-203ENST00000546904 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
PPP1CC-203ENST00000546904 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
PPP1CC-203ENST00000546904 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
PPP1CC-203ENST00000546904 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
PPP1CC-203ENST00000546904 CNKSR2Q8WXI2 1034 aa18.73■□□□□ 0.59
PPP1CC-203ENST00000546904 CACNB1Q02641 598 aaPredicted RBP18.71■□□□□ 0.59
PPP1CC-203ENST00000546904 RNF216Q9NWF9 866 aaPredicted RBP18.59■□□□□ 0.57
PPP1CC-203ENST00000546904 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
PPP1CC-203ENST00000546904 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
PPP1CC-203ENST00000546904 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
PPP1CC-203ENST00000546904 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
PPP1CC-203ENST00000546904 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
PPP1CC-203ENST00000546904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
PPP1CC-203ENST00000546904 KCNA4P22459 653 aa17.44■□□□□ 0.38
PPP1CC-203ENST00000546904 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
PPP1CC-203ENST00000546904 CAPN15O75808 1086 aa17.31■□□□□ 0.36
PPP1CC-203ENST00000546904 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
PPP1CC-203ENST00000546904 DSG3P32926 999 aa17.17■□□□□ 0.34
PPP1CC-203ENST00000546904 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
PPP1CC-203ENST00000546904 APLP2Q06481 763 aa17.13■□□□□ 0.33
PPP1CC-203ENST00000546904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
PPP1CC-203ENST00000546904 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
PPP1CC-203ENST00000546904 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
PPP1CC-203ENST00000546904 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
PPP1CC-203ENST00000546904 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
PPP1CC-203ENST00000546904 ABCB7O75027 752 aa16.85■□□□□ 0.29
PPP1CC-203ENST00000546904 POTEHQ6S545 545 aa16.72■□□□□ 0.27
PPP1CC-203ENST00000546904 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
PPP1CC-203ENST00000546904 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
PPP1CC-203ENST00000546904 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
PPP1CC-203ENST00000546904 POLA2Q14181 598 aa16.48■□□□□ 0.23
PPP1CC-203ENST00000546904 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
PPP1CC-203ENST00000546904 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
PPP1CC-203ENST00000546904 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
PPP1CC-203ENST00000546904 CHRDL2Q6WN34 429 aa16.14■□□□□ 0.17
PPP1CC-203ENST00000546904 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
PPP1CC-203ENST00000546904 ZBTB22O15209 634 aa15.97■□□□□ 0.15
PPP1CC-203ENST00000546904 ATXN8OSP0DMR3 200 aa15.93■□□□□ 0.14
PPP1CC-203ENST00000546904 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
PPP1CC-203ENST00000546904 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
PPP1CC-203ENST00000546904 FBLN2P98095 1184 aa15.74■□□□□ 0.11
PPP1CC-203ENST00000546904 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
PPP1CC-203ENST00000546904 PITPNM1O00562 1244 aa15.67■□□□□ 0.1
PPP1CC-203ENST00000546904 SPDYE2BA6NHP3 402 aa15.64■□□□□ 0.09
PPP1CC-203ENST00000546904 SPDYE6P0CI01 402 aa15.64■□□□□ 0.09
PPP1CC-203ENST00000546904 SPDYE2Q495Y8 402 aa15.64■□□□□ 0.09
PPP1CC-203ENST00000546904 SP7Q8TDD2 431 aaPredicted RBP15.61■□□□□ 0.09
PPP1CC-203ENST00000546904 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
PPP1CC-203ENST00000546904 HAX1O00165 279 aa15.53■□□□□ 0.08
PPP1CC-203ENST00000546904 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
PPP1CC-203ENST00000546904 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
PPP1CC-203ENST00000546904 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
PPP1CC-203ENST00000546904 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
PPP1CC-203ENST00000546904 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
PPP1CC-203ENST00000546904 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
PPP1CC-203ENST00000546904 EVX2Q03828 476 aa15.18■□□□□ 0.02
PPP1CC-203ENST00000546904 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
PPP1CC-203ENST00000546904 PRR29P0C7W0 189 aa15.15■□□□□ 0.02
PPP1CC-203ENST00000546904 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
PPP1CC-203ENST00000546904 C19orf67A6NJJ6 358 aa15.08■□□□□ 0
PPP1CC-203ENST00000546904 CHADLQ6NUI6 762 aa15.06■□□□□ 0
PPP1CC-203ENST00000546904 GABBR2O75899 941 aa14.91□□□□□ -0.02
PPP1CC-203ENST00000546904 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
PPP1CC-203ENST00000546904 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
PPP1CC-203ENST00000546904 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
PPP1CC-203ENST00000546904 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
PPP1CC-203ENST00000546904 CLCN6P51797 869 aa14.73□□□□□ -0.05
PPP1CC-203ENST00000546904 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
PPP1CC-203ENST00000546904 LHX8Q68G74 356 aa14.66□□□□□ -0.06
PPP1CC-203ENST00000546904 CREBZFQ9NS37 354 aa14.63□□□□□ -0.07
PPP1CC-203ENST00000546904 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
PPP1CC-203ENST00000546904 DCBLD2Q96PD2 775 aa14.57□□□□□ -0.08
PPP1CC-203ENST00000546904 ZNF579Q8NAF0 562 aaKnown RBP14.55□□□□□ -0.08
PPP1CC-203ENST00000546904 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
PPP1CC-203ENST00000546904 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
PPP1CC-203ENST00000546904 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPP1CC-203ENST00000546904 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
PPP1CC-203ENST00000546904 MNX1P50219 401 aaPredicted RBP14.32□□□□□ -0.12
PPP1CC-203ENST00000546904 PHF12Q96QT6 1004 aa14.32□□□□□ -0.12
PPP1CC-203ENST00000546904 PROM2Q8N271 834 aa14.25□□□□□ -0.13
PPP1CC-203ENST00000546904 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
PPP1CC-203ENST00000546904 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
PPP1CC-203ENST00000546904 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
PPP1CC-203ENST00000546904 MIER1Q8N108 512 aa14.12□□□□□ -0.15
PPP1CC-203ENST00000546904 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
PPP1CC-203ENST00000546904 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
PPP1CC-203ENST00000546904 SLC39A7Q92504 469 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms