RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
PRKAB1-209ENST00000545870 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
PRKAB1-209ENST00000545870 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
PRKAB1-209ENST00000545870 CCDC180Q9P1Z9 1646 aa15.39■□□□□ 0.05
PRKAB1-209ENST00000545870 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
PRKAB1-209ENST00000545870 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
PRKAB1-209ENST00000545870 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
PRKAB1-209ENST00000545870 PHF23Q9BUL5 403 aaPredicted RBP14.52□□□□□ -0.09
PRKAB1-209ENST00000545870 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
PRKAB1-209ENST00000545870 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
PRKAB1-209ENST00000545870 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
PRKAB1-209ENST00000545870 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
PRKAB1-209ENST00000545870 NACADO15069 1562 aa14.24□□□□□ -0.13
PRKAB1-209ENST00000545870 ABCC9O60706 1549 aa14.2□□□□□ -0.14
PRKAB1-209ENST00000545870 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
PRKAB1-209ENST00000545870 RB1CC1Q8TDY2 1594 aa14□□□□□ -0.17
PRKAB1-209ENST00000545870 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
PRKAB1-209ENST00000545870 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
PRKAB1-209ENST00000545870 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
PRKAB1-209ENST00000545870 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
PRKAB1-209ENST00000545870 WIZO95785 1651 aa13.63□□□□□ -0.23
PRKAB1-209ENST00000545870 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
PRKAB1-209ENST00000545870 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
PRKAB1-209ENST00000545870 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
PRKAB1-209ENST00000545870 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
PRKAB1-209ENST00000545870 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
PRKAB1-209ENST00000545870 EIF4G1Q04637 1599 aaKnown RBP13.52□□□□□ -0.25
PRKAB1-209ENST00000545870 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
PRKAB1-209ENST00000545870 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
PRKAB1-209ENST00000545870 LOC105371045A0A1W2PR82 267 aa13.46□□□□□ -0.25
PRKAB1-209ENST00000545870 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
PRKAB1-209ENST00000545870 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
PRKAB1-209ENST00000545870 HRCP23327 699 aa13.36□□□□□ -0.27
PRKAB1-209ENST00000545870 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRKAB1-209ENST00000545870 PCGF6Q9BYE7 350 aa13.32□□□□□ -0.28
PRKAB1-209ENST00000545870 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
PRKAB1-209ENST00000545870 EEA1Q15075 1411 aa13.29□□□□□ -0.28
PRKAB1-209ENST00000545870 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
PRKAB1-209ENST00000545870 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
PRKAB1-209ENST00000545870 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
PRKAB1-209ENST00000545870 FOXD1Q16676 465 aa13.22□□□□□ -0.29
PRKAB1-209ENST00000545870 ABCC8Q09428 1581 aa13.21□□□□□ -0.29
PRKAB1-209ENST00000545870 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
PRKAB1-209ENST00000545870 WRNQ14191 1432 aaPredicted RBP eCLIP13.15□□□□□ -0.3
PRKAB1-209ENST00000545870 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
PRKAB1-209ENST00000545870 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
PRKAB1-209ENST00000545870 SOGA1O94964 1423 aa13.08□□□□□ -0.32
PRKAB1-209ENST00000545870 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
PRKAB1-209ENST00000545870 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
PRKAB1-209ENST00000545870 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
PRKAB1-209ENST00000545870 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
PRKAB1-209ENST00000545870 CEP162Q5TB80 1403 aa13.04□□□□□ -0.32
PRKAB1-209ENST00000545870 KIF21BO75037 1637 aa13.03□□□□□ -0.32
PRKAB1-209ENST00000545870 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
PRKAB1-209ENST00000545870 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
PRKAB1-209ENST00000545870 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
PRKAB1-209ENST00000545870 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
PRKAB1-209ENST00000545870 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
PRKAB1-209ENST00000545870 CFTRP13569 1480 aa12.95□□□□□ -0.34
PRKAB1-209ENST00000545870 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
PRKAB1-209ENST00000545870 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
PRKAB1-209ENST00000545870 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
PRKAB1-209ENST00000545870 CUX1P39880 1505 aa12.85□□□□□ -0.35
PRKAB1-209ENST00000545870 PPARGC1BQ86YN6 1023 aaKnown RBP12.85□□□□□ -0.35
PRKAB1-209ENST00000545870 CLIP1P30622 1438 aa12.84□□□□□ -0.35
PRKAB1-209ENST00000545870 PRXQ9BXM0 1461 aa12.84□□□□□ -0.35
PRKAB1-209ENST00000545870 ADRA2BP18089 450 aa12.82□□□□□ -0.36
PRKAB1-209ENST00000545870 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
PRKAB1-209ENST00000545870 KIF27Q86VH2 1401 aa12.81□□□□□ -0.36
PRKAB1-209ENST00000545870 RAPGEF2Q9Y4G8 1499 aa12.81□□□□□ -0.36
PRKAB1-209ENST00000545870 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
PRKAB1-209ENST00000545870 PPP6R1Q9UPN7 881 aa12.78□□□□□ -0.36
PRKAB1-209ENST00000545870 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
PRKAB1-209ENST00000545870 APLP2Q06481 763 aa12.68□□□□□ -0.38
PRKAB1-209ENST00000545870 CCER1Q8TC90 406 aaPredicted RBP12.67□□□□□ -0.38
PRKAB1-209ENST00000545870 CUX2O14529 1486 aa12.65□□□□□ -0.38
PRKAB1-209ENST00000545870 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
PRKAB1-209ENST00000545870 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
PRKAB1-209ENST00000545870 FGD5Q6ZNL6 1462 aa12.64□□□□□ -0.39
PRKAB1-209ENST00000545870 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
PRKAB1-209ENST00000545870 IGF1RP08069 1367 aa12.63□□□□□ -0.39
PRKAB1-209ENST00000545870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
PRKAB1-209ENST00000545870 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
PRKAB1-209ENST00000545870 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.4
PRKAB1-209ENST00000545870 MAP3K1Q13233 1512 aa12.57□□□□□ -0.4
PRKAB1-209ENST00000545870 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
PRKAB1-209ENST00000545870 ARHGAP35Q9NRY4 1499 aa12.56□□□□□ -0.4
PRKAB1-209ENST00000545870 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
PRKAB1-209ENST00000545870 PIAS4Q8N2W9 510 aaPredicted RBP12.55□□□□□ -0.4
PRKAB1-209ENST00000545870 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
PRKAB1-209ENST00000545870 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-209ENST00000545870 CUL7Q14999 1698 aa12.52□□□□□ -0.4
PRKAB1-209ENST00000545870 PDS5BQ9NTI5 1447 aa12.51□□□□□ -0.41
PRKAB1-209ENST00000545870 RRBP1Q9P2E9 1410 aaKnown RBP12.5□□□□□ -0.41
PRKAB1-209ENST00000545870 EFCAB5A4FU69 1503 aa12.49□□□□□ -0.41
PRKAB1-209ENST00000545870 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
PRKAB1-209ENST00000545870 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
PRKAB1-209ENST00000545870 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
PRKAB1-209ENST00000545870 NESP48681 1621 aa12.47□□□□□ -0.41
PRKAB1-209ENST00000545870 WDR97A6NE52 1622 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms