RNA–Protein interactions for RNA: ENST00000545593.1

AP000462.3-201, humanhuman

TSL 5 BASIC

Gene AP000462.3, Length 330 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000462.3-201ENST00000545593 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
AP000462.3-201ENST00000545593 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
AP000462.3-201ENST00000545593 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
AP000462.3-201ENST00000545593 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.52
AP000462.3-201ENST00000545593 FOXD1Q16676 465 aa17.3■□□□□ 0.36
AP000462.3-201ENST00000545593 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
AP000462.3-201ENST00000545593 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
AP000462.3-201ENST00000545593 MSH5O43196 834 aa16.35■□□□□ 0.21
AP000462.3-201ENST00000545593 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
AP000462.3-201ENST00000545593 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
AP000462.3-201ENST00000545593 ADRA2BP18089 450 aa16.15■□□□□ 0.18
AP000462.3-201ENST00000545593 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
AP000462.3-201ENST00000545593 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
AP000462.3-201ENST00000545593 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
AP000462.3-201ENST00000545593 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
AP000462.3-201ENST00000545593 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
AP000462.3-201ENST00000545593 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
AP000462.3-201ENST00000545593 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
AP000462.3-201ENST00000545593 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
AP000462.3-201ENST00000545593 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
AP000462.3-201ENST00000545593 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
AP000462.3-201ENST00000545593 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
AP000462.3-201ENST00000545593 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
AP000462.3-201ENST00000545593 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
AP000462.3-201ENST00000545593 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
AP000462.3-201ENST00000545593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.24
AP000462.3-201ENST00000545593 KCNA4P22459 653 aa13.49□□□□□ -0.25
AP000462.3-201ENST00000545593 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
AP000462.3-201ENST00000545593 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
AP000462.3-201ENST00000545593 CAPN15O75808 1086 aa13.09□□□□□ -0.31
AP000462.3-201ENST00000545593 POTEHQ6S545 545 aa13.09□□□□□ -0.31
AP000462.3-201ENST00000545593 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
AP000462.3-201ENST00000545593 APLP2Q06481 763 aa13.03□□□□□ -0.32
AP000462.3-201ENST00000545593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
AP000462.3-201ENST00000545593 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
AP000462.3-201ENST00000545593 DSG3P32926 999 aa12.93□□□□□ -0.34
AP000462.3-201ENST00000545593 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
AP000462.3-201ENST00000545593 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
AP000462.3-201ENST00000545593 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
AP000462.3-201ENST00000545593 ABCB7O75027 752 aa12.74□□□□□ -0.37
AP000462.3-201ENST00000545593 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
AP000462.3-201ENST00000545593 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
AP000462.3-201ENST00000545593 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
AP000462.3-201ENST00000545593 POLA2Q14181 598 aa12.49□□□□□ -0.41
AP000462.3-201ENST00000545593 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
AP000462.3-201ENST00000545593 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
AP000462.3-201ENST00000545593 ZBTB22O15209 634 aa12.4□□□□□ -0.42
AP000462.3-201ENST00000545593 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
AP000462.3-201ENST00000545593 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
AP000462.3-201ENST00000545593 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
AP000462.3-201ENST00000545593 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
AP000462.3-201ENST00000545593 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
AP000462.3-201ENST00000545593 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
AP000462.3-201ENST00000545593 FBLN2P98095 1184 aa11.95□□□□□ -0.5
AP000462.3-201ENST00000545593 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
AP000462.3-201ENST00000545593 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
AP000462.3-201ENST00000545593 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
AP000462.3-201ENST00000545593 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
AP000462.3-201ENST00000545593 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
AP000462.3-201ENST00000545593 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
AP000462.3-201ENST00000545593 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
AP000462.3-201ENST00000545593 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
AP000462.3-201ENST00000545593 HAX1O00165 279 aa11.72□□□□□ -0.53
AP000462.3-201ENST00000545593 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
AP000462.3-201ENST00000545593 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
AP000462.3-201ENST00000545593 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
AP000462.3-201ENST00000545593 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
AP000462.3-201ENST00000545593 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
AP000462.3-201ENST00000545593 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
AP000462.3-201ENST00000545593 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
AP000462.3-201ENST00000545593 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
AP000462.3-201ENST00000545593 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
AP000462.3-201ENST00000545593 EVX2Q03828 476 aa11.45□□□□□ -0.58
AP000462.3-201ENST00000545593 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
AP000462.3-201ENST00000545593 C19orf67A6NJJ6 358 aa11.36□□□□□ -0.59
AP000462.3-201ENST00000545593 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
AP000462.3-201ENST00000545593 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
AP000462.3-201ENST00000545593 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
AP000462.3-201ENST00000545593 GABBR2O75899 941 aa11.22□□□□□ -0.61
AP000462.3-201ENST00000545593 CD44P16070 742 aaKnown RBP11.2□□□□□ -0.62
AP000462.3-201ENST00000545593 LHX8Q68G74 356 aa11.18□□□□□ -0.62
AP000462.3-201ENST00000545593 CLCN6P51797 869 aa11.17□□□□□ -0.62
AP000462.3-201ENST00000545593 CREBZFQ9NS37 354 aa11.15□□□□□ -0.62
AP000462.3-201ENST00000545593 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
AP000462.3-201ENST00000545593 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
AP000462.3-201ENST00000545593 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
AP000462.3-201ENST00000545593 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
AP000462.3-201ENST00000545593 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
AP000462.3-201ENST00000545593 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
AP000462.3-201ENST00000545593 PROM2Q8N271 834 aa10.98□□□□□ -0.65
AP000462.3-201ENST00000545593 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
AP000462.3-201ENST00000545593 POTEIP0CG38 1075 aa10.94□□□□□ -0.66
AP000462.3-201ENST00000545593 GALR2O43603 387 aaPredicted RBP10.86□□□□□ -0.67
AP000462.3-201ENST00000545593 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
AP000462.3-201ENST00000545593 PHF12Q96QT6 1004 aa10.86□□□□□ -0.67
AP000462.3-201ENST00000545593 MIER1Q8N108 512 aa10.8□□□□□ -0.68
AP000462.3-201ENST00000545593 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
AP000462.3-201ENST00000545593 FKBP8Q14318 412 aa10.75□□□□□ -0.69
AP000462.3-201ENST00000545593 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
AP000462.3-201ENST00000545593 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9208.8 ms