RNA–Protein interactions for RNA: ENST00000545202.1

AP000439.3-201, humanhuman

TSL 2 BASIC

Gene AP000439.3, Length 2,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.3-201ENST00000545202 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
AP000439.3-201ENST00000545202 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
AP000439.3-201ENST00000545202 CCDC180Q9P1Z9 1646 aa27.58■■■□□ 2.01
AP000439.3-201ENST00000545202 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
AP000439.3-201ENST00000545202 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
AP000439.3-201ENST00000545202 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.88
AP000439.3-201ENST00000545202 DCAF1Q9Y4B6 1507 aa26.59■■□□□ 1.85
AP000439.3-201ENST00000545202 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
AP000439.3-201ENST00000545202 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
AP000439.3-201ENST00000545202 ABCC9O60706 1549 aa25.88■■□□□ 1.73
AP000439.3-201ENST00000545202 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
AP000439.3-201ENST00000545202 RSF1Q96T23 1441 aaPredicted RBP25.64■■□□□ 1.69
AP000439.3-201ENST00000545202 LOC105371045A0A1W2PR82 267 aa25.57■■□□□ 1.68
AP000439.3-201ENST00000545202 HRCP23327 699 aa25.56■■□□□ 1.68
AP000439.3-201ENST00000545202 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
AP000439.3-201ENST00000545202 NACADO15069 1562 aa25.47■■□□□ 1.67
AP000439.3-201ENST00000545202 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
AP000439.3-201ENST00000545202 CECR2Q9BXF3 1484 aa25.26■■□□□ 1.63
AP000439.3-201ENST00000545202 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
AP000439.3-201ENST00000545202 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
AP000439.3-201ENST00000545202 WIZO95785 1651 aa25.08■■□□□ 1.61
AP000439.3-201ENST00000545202 TRIM26Q12899 539 aaPredicted RBP25.07■■□□□ 1.6
AP000439.3-201ENST00000545202 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
AP000439.3-201ENST00000545202 FAM9AQ8IZU1 332 aaPredicted RBP25.02■■□□□ 1.6
AP000439.3-201ENST00000545202 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
AP000439.3-201ENST00000545202 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
AP000439.3-201ENST00000545202 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
AP000439.3-201ENST00000545202 EIF4G1Q04637 1599 aaKnown RBP24.75■■□□□ 1.55
AP000439.3-201ENST00000545202 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
AP000439.3-201ENST00000545202 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
AP000439.3-201ENST00000545202 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
AP000439.3-201ENST00000545202 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
AP000439.3-201ENST00000545202 ZEB1P37275 1124 aaPredicted RBP24.53■■□□□ 1.52
AP000439.3-201ENST00000545202 ABCC8Q09428 1581 aa24.51■■□□□ 1.51
AP000439.3-201ENST00000545202 BICRAQ9NZM4 1560 aa24.38■■□□□ 1.49
AP000439.3-201ENST00000545202 PABPN1Q86U42 306 aaKnown RBP eCLIP24.36■■□□□ 1.49
AP000439.3-201ENST00000545202 SOGA1O94964 1423 aa24.27■■□□□ 1.48
AP000439.3-201ENST00000545202 PEG3Q9GZU2 1588 aa24.22■■□□□ 1.47
AP000439.3-201ENST00000545202 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
AP000439.3-201ENST00000545202 RUSC2Q8N2Y8 1516 aa24.16■■□□□ 1.46
AP000439.3-201ENST00000545202 EEA1Q15075 1411 aa24.16■■□□□ 1.46
AP000439.3-201ENST00000545202 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
AP000439.3-201ENST00000545202 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
AP000439.3-201ENST00000545202 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
AP000439.3-201ENST00000545202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
AP000439.3-201ENST00000545202 UBTFP17480 764 aaKnown RBP24.04■■□□□ 1.44
AP000439.3-201ENST00000545202 ATAD2BQ9ULI0 1458 aa24.03■■□□□ 1.44
AP000439.3-201ENST00000545202 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
AP000439.3-201ENST00000545202 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
AP000439.3-201ENST00000545202 GOLGA3Q08378 1498 aa23.99■■□□□ 1.43
AP000439.3-201ENST00000545202 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
AP000439.3-201ENST00000545202 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
AP000439.3-201ENST00000545202 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
AP000439.3-201ENST00000545202 KIF21BO75037 1637 aa23.85■■□□□ 1.41
AP000439.3-201ENST00000545202 CLIP1P30622 1438 aa23.71■■□□□ 1.39
AP000439.3-201ENST00000545202 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
AP000439.3-201ENST00000545202 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
AP000439.3-201ENST00000545202 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
AP000439.3-201ENST00000545202 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
AP000439.3-201ENST00000545202 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
AP000439.3-201ENST00000545202 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
AP000439.3-201ENST00000545202 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
AP000439.3-201ENST00000545202 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
AP000439.3-201ENST00000545202 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
AP000439.3-201ENST00000545202 HNRNPUL2Q1KMD3 747 aaKnown RBP23.51■■□□□ 1.35
AP000439.3-201ENST00000545202 APLP2Q06481 763 aa23.5■■□□□ 1.35
AP000439.3-201ENST00000545202 ERICH3Q5RHP9 1530 aa23.46■■□□□ 1.35
AP000439.3-201ENST00000545202 PRXQ9BXM0 1461 aa23.45■■□□□ 1.34
AP000439.3-201ENST00000545202 CUX1P39880 1505 aa23.45■■□□□ 1.34
AP000439.3-201ENST00000545202 CFTRP13569 1480 aa23.38■■□□□ 1.33
AP000439.3-201ENST00000545202 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
AP000439.3-201ENST00000545202 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
AP000439.3-201ENST00000545202 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
AP000439.3-201ENST00000545202 ARAP1Q96P48 1450 aa23.34■■□□□ 1.33
AP000439.3-201ENST00000545202 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
AP000439.3-201ENST00000545202 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
AP000439.3-201ENST00000545202 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
AP000439.3-201ENST00000545202 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
AP000439.3-201ENST00000545202 ARHGAP35Q9NRY4 1499 aa23.14■■□□□ 1.29
AP000439.3-201ENST00000545202 CUX2O14529 1486 aa23.11■■□□□ 1.29
AP000439.3-201ENST00000545202 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
AP000439.3-201ENST00000545202 IGF1RP08069 1367 aa23.08■■□□□ 1.28
AP000439.3-201ENST00000545202 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.28
AP000439.3-201ENST00000545202 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
AP000439.3-201ENST00000545202 DHX57Q6P158 1386 aaKnown RBP23.06■■□□□ 1.28
AP000439.3-201ENST00000545202 CLSPNQ9HAW4 1339 aa23.05■■□□□ 1.28
AP000439.3-201ENST00000545202 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
AP000439.3-201ENST00000545202 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
AP000439.3-201ENST00000545202 MIER1Q8N108 512 aa23.03■■□□□ 1.28
AP000439.3-201ENST00000545202 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
AP000439.3-201ENST00000545202 CCNB3Q8WWL7 1395 aa22.97■■□□□ 1.27
AP000439.3-201ENST00000545202 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
AP000439.3-201ENST00000545202 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
AP000439.3-201ENST00000545202 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
AP000439.3-201ENST00000545202 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.26
AP000439.3-201ENST00000545202 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
AP000439.3-201ENST00000545202 ITGAEP38570 1179 aa22.87■■□□□ 1.25
AP000439.3-201ENST00000545202 LRRC9Q6ZRR7 1453 aa22.81■■□□□ 1.24
AP000439.3-201ENST00000545202 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
AP000439.3-201ENST00000545202 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms