RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 DCAF8L2P0C7V8 631 aa34.57■■■■□ 3.12
BPTF-208ENST00000544778 EHMT2Q96KQ7 1210 aa32.32■■■□□ 2.76
BPTF-208ENST00000544778 SUPT5HO00267 1087 aaKnown RBP32.28■■■□□ 2.76
BPTF-208ENST00000544778 PELP1Q8IZL8 1130 aaKnown RBP32.26■■■□□ 2.76
BPTF-208ENST00000544778 APLP2Q06481 763 aa31.54■■■□□ 2.64
BPTF-208ENST00000544778 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
BPTF-208ENST00000544778 FAM9AQ8IZU1 332 aaPredicted RBP31.3■■■□□ 2.6
BPTF-208ENST00000544778 ERICH6Q7L0X2 663 aa31.29■■■□□ 2.6
BPTF-208ENST00000544778 TTBK1Q5TCY1 1321 aaPredicted RBP31.2■■■□□ 2.59
BPTF-208ENST00000544778 CCER1Q8TC90 406 aaPredicted RBP30.87■■■□□ 2.53
BPTF-208ENST00000544778 RANGAP1P46060 587 aaPredicted RBP30.81■■■□□ 2.52
BPTF-208ENST00000544778 ATP1B4Q9UN42 357 aaPredicted RBP30.73■■■□□ 2.51
BPTF-208ENST00000544778 PCGF6Q9BYE7 350 aa30.61■■■□□ 2.49
BPTF-208ENST00000544778 CENPBP07199 599 aaPredicted RBP30.4■■■□□ 2.46
BPTF-208ENST00000544778 NEFLP07196 543 aa30.2■■■□□ 2.43
BPTF-208ENST00000544778 MYT1Q01538 1121 aa30.11■■■□□ 2.41
BPTF-208ENST00000544778 YTHDC1Q96MU7 727 aaKnown RBP30.06■■■□□ 2.4
BPTF-208ENST00000544778 MYT1LQ9UL68 1186 aa29.89■■■□□ 2.38
BPTF-208ENST00000544778 DAXXQ9UER7 740 aaPredicted RBP29.87■■■□□ 2.37
BPTF-208ENST00000544778 UBTFP17480 764 aaKnown RBP29.83■■■□□ 2.37
BPTF-208ENST00000544778 ZEB1P37275 1124 aaPredicted RBP29.8■■■□□ 2.36
BPTF-208ENST00000544778 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
BPTF-208ENST00000544778 POLR3GLQ9BT43 218 aa29.72■■■□□ 2.35
BPTF-208ENST00000544778 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
BPTF-208ENST00000544778 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
BPTF-208ENST00000544778 CNGB1Q14028 1251 aaPredicted RBP29.5■■■□□ 2.31
BPTF-208ENST00000544778 PPARGC1BQ86YN6 1023 aaKnown RBP29.45■■■□□ 2.3
BPTF-208ENST00000544778 SLC4A1APQ9BWU0 796 aaKnown RBP29.45■■■□□ 2.3
BPTF-208ENST00000544778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.43■■■□□ 2.3
BPTF-208ENST00000544778 HNRNPUL2Q1KMD3 747 aaKnown RBP29.43■■■□□ 2.3
BPTF-208ENST00000544778 ITGAEP38570 1179 aa29.3■■■□□ 2.28
BPTF-208ENST00000544778 ZNF316A6NFI3 1004 aaPredicted RBP29.09■■■□□ 2.25
BPTF-208ENST00000544778 CLSPNQ9HAW4 1339 aa29.08■■■□□ 2.25
BPTF-208ENST00000544778 RTL5Q5HYW3 569 aaPredicted RBP28.81■■■□□ 2.2
BPTF-208ENST00000544778 SLC24A1O60721 1099 aa28.67■■■□□ 2.18
BPTF-208ENST00000544778 BCL11AQ9H165 835 aa28.61■■■□□ 2.17
BPTF-208ENST00000544778 TRIM26Q12899 539 aaPredicted RBP28.57■■■□□ 2.16
BPTF-208ENST00000544778 ZBTB47Q9UFB7 747 aaPredicted RBP28.53■■■□□ 2.16
BPTF-208ENST00000544778 HRCP23327 699 aa28.4■■■□□ 2.14
BPTF-208ENST00000544778 TRIM52Q96A61 297 aa28.34■■■□□ 2.13
BPTF-208ENST00000544778 FAM50AQ14320 339 aaKnown RBP28.32■■■□□ 2.12
BPTF-208ENST00000544778 BCANQ96GW7 911 aa28.28■■■□□ 2.12
BPTF-208ENST00000544778 ZNF326Q5BKZ1 582 aaKnown RBP28.19■■■□□ 2.1
BPTF-208ENST00000544778 NEUROD1Q13562 356 aa28.18■■■□□ 2.1
BPTF-208ENST00000544778 CANXP27824 592 aaKnown RBP28.18■■■□□ 2.1
BPTF-208ENST00000544778 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
BPTF-208ENST00000544778 DIEXFQ68CQ4 756 aaKnown RBP28.03■■■□□ 2.08
BPTF-208ENST00000544778 NEFMP07197 916 aa28.01■■■□□ 2.07
BPTF-208ENST00000544778 CDK11AQ9UQ88 783 aaPredicted RBP27.95■■■□□ 2.07
BPTF-208ENST00000544778 ANP32CO43423 234 aa27.86■■■□□ 2.05
BPTF-208ENST00000544778 FBLN2P98095 1184 aa27.86■■■□□ 2.05
BPTF-208ENST00000544778 PLPPR3Q6T4P5 718 aa27.78■■■□□ 2.04
BPTF-208ENST00000544778 NPM2Q86SE8 214 aaKnown RBP27.69■■■□□ 2.02
BPTF-208ENST00000544778 ANP32BQ92688 251 aaKnown RBP27.62■■■□□ 2.01
BPTF-208ENST00000544778 HSP90AA1P07900 732 aaKnown RBP27.61■■■□□ 2.01
BPTF-208ENST00000544778 ANP32AP39687 249 aaKnown RBP27.57■■■□□ 2
BPTF-208ENST00000544778 ARID3CA6NKF2 412 aa27.56■■■□□ 2
BPTF-208ENST00000544778 ESF1Q9H501 851 aaKnown RBP27.55■■■□□ 2
BPTF-208ENST00000544778 GTF3C3Q9Y5Q9 886 aa27.51■■■□□ 2
BPTF-208ENST00000544778 EIF5BO60841 1220 aaKnown RBP27.51■■□□□ 1.99
BPTF-208ENST00000544778 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
BPTF-208ENST00000544778 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
BPTF-208ENST00000544778 CHGAP10645 457 aaKnown RBP27.39■■□□□ 1.98
BPTF-208ENST00000544778 A0A0G2JS52 829 aa27.37■■□□□ 1.97
BPTF-208ENST00000544778 SCAF1Q9H7N4 1312 aaKnown RBP27.36■■□□□ 1.97
BPTF-208ENST00000544778 CDK11BP21127 795 aaKnown RBP27.31■■□□□ 1.96
BPTF-208ENST00000544778 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
BPTF-208ENST00000544778 P3H3Q8IVL6 736 aa27.3■■□□□ 1.96
BPTF-208ENST00000544778 UPF2Q9HAU5 1272 aaKnown RBP27.28■■□□□ 1.96
BPTF-208ENST00000544778 ARXQ96QS3 562 aa27.24■■□□□ 1.95
BPTF-208ENST00000544778 SALL2Q9Y467 1007 aaPredicted RBP27.18■■□□□ 1.94
BPTF-208ENST00000544778 PLEKHG5O94827 1062 aa27.12■■□□□ 1.93
BPTF-208ENST00000544778 ZBTB7CA1YPR0 619 aa27.06■■□□□ 1.92
BPTF-208ENST00000544778 TULP1O00294 542 aaPredicted RBP27.02■■□□□ 1.92
BPTF-208ENST00000544778 GLIPR1L2Q4G1C9 344 aa27.02■■□□□ 1.92
BPTF-208ENST00000544778 FAM9BQ8IZU0 186 aa26.98■■□□□ 1.91
BPTF-208ENST00000544778 FKBP8Q14318 412 aa26.97■■□□□ 1.91
BPTF-208ENST00000544778 NBR1Q14596 966 aa26.96■■□□□ 1.91
BPTF-208ENST00000544778 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
BPTF-208ENST00000544778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.93e-7■■■□□ 15.1
BPTF-208ENST00000544778 NPM1P06748 294 aaKnown RBP eCLIP26.89■■□□□ 1.9
BPTF-208ENST00000544778 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.88■■□□□ 1.89
BPTF-208ENST00000544778 HNRNPUQ00839 825 aaKnown RBP eCLIP26.87■■□□□ 1.89
BPTF-208ENST00000544778 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
BPTF-208ENST00000544778 MYH16Q9H6N6 1097 aa26.83■■□□□ 1.89
BPTF-208ENST00000544778 WDR43Q15061 677 aaKnown RBP eCLIP26.83■■□□□ 1.88
BPTF-208ENST00000544778 ABCC9O60706 1549 aa26.81■■□□□ 1.88
BPTF-208ENST00000544778 TONSLQ96HA7 1378 aa26.78■■□□□ 1.88
BPTF-208ENST00000544778 TMC1Q8TDI8 760 aa26.77■■□□□ 1.88
BPTF-208ENST00000544778 CCDC136Q96JN2 1154 aa26.76■■□□□ 1.87
BPTF-208ENST00000544778 TPRNQ4KMQ1 711 aa26.7■■□□□ 1.87
BPTF-208ENST00000544778 KDM2AQ9Y2K7 1162 aa26.69■■□□□ 1.86
BPTF-208ENST00000544778 ACIN1Q9UKV3 1341 aaKnown RBP26.68■■□□□ 1.86
BPTF-208ENST00000544778 HAP1P54257 671 aaPredicted RBP26.68■■□□□ 1.86
BPTF-208ENST00000544778 NCLP19338 710 aaKnown RBP26.67■■□□□ 1.86
BPTF-208ENST00000544778 DDX10Q13206 875 aaKnown RBP26.65■■□□□ 1.86
BPTF-208ENST00000544778 TAOK2Q9UL54 1235 aa26.6■■□□□ 1.85
BPTF-208ENST00000544778 NCBP3Q53F19 620 aaKnown RBP26.59■■□□□ 1.85
BPTF-208ENST00000544778 CHIC2Q9UKJ5 165 aa26.58■■□□□ 1.85
BPTF-208ENST00000544778 ZRSR1Q15695 479 aaKnown RBP26.58■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms