RNA–Protein interactions for RNA: ENST00000543486.1

AP003170.4-201, humanhuman

TSL 3 BASIC

Gene AP003170.4, Length 586 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003170.4-201ENST00000543486 AEBP2Q6ZN18 517 aaPredicted RBP33.77■■■■□ 3
AP003170.4-201ENST00000543486 CHIC1Q5VXU3 224 aa31.96■■■□□ 2.71
AP003170.4-201ENST00000543486 SENP3Q9H4L4 574 aaPredicted RBP28.7■■■□□ 2.18
AP003170.4-201ENST00000543486 PHF23Q9BUL5 403 aaPredicted RBP28.4■■■□□ 2.14
AP003170.4-201ENST00000543486 FOXD1Q16676 465 aa26.84■■□□□ 1.89
AP003170.4-201ENST00000543486 PLPPR3Q6T4P5 718 aa25.5■■□□□ 1.67
AP003170.4-201ENST00000543486 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
AP003170.4-201ENST00000543486 PIAS4Q8N2W9 510 aaPredicted RBP25.07■■□□□ 1.6
AP003170.4-201ENST00000543486 ADRA2BP18089 450 aa25.06■■□□□ 1.6
AP003170.4-201ENST00000543486 MSH5O43196 834 aa25.03■■□□□ 1.6
AP003170.4-201ENST00000543486 POTEDQ86YR6 584 aa24.58■■□□□ 1.53
AP003170.4-201ENST00000543486 MAPK8IP2Q13387 824 aaPredicted RBP23.05■■□□□ 1.28
AP003170.4-201ENST00000543486 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
AP003170.4-201ENST00000543486 SCAF1Q9H7N4 1312 aaKnown RBP22.78■■□□□ 1.24
AP003170.4-201ENST00000543486 PPP4R3CPQ6ZMV5 832 aa22.4■■□□□ 1.18
AP003170.4-201ENST00000543486 DCAF8L1A6NGE4 600 aa21.96■■□□□ 1.11
AP003170.4-201ENST00000543486 CNKSR2Q8WXI2 1034 aa21.94■■□□□ 1.1
AP003170.4-201ENST00000543486 HOXD11P31277 338 aaPredicted RBP21.9■■□□□ 1.1
AP003170.4-201ENST00000543486 RNF216Q9NWF9 866 aaPredicted RBP21.73■■□□□ 1.07
AP003170.4-201ENST00000543486 CACNB1Q02641 598 aaPredicted RBP21.58■■□□□ 1.05
AP003170.4-201ENST00000543486 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
AP003170.4-201ENST00000543486 RNF39Q9H2S5 420 aa21.39■■□□□ 1.01
AP003170.4-201ENST00000543486 NPM3O75607 178 aaKnown RBP21.23■□□□□ 0.99
AP003170.4-201ENST00000543486 C1QBPQ07021 282 aaKnown RBP21.04■□□□□ 0.96
AP003170.4-201ENST00000543486 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
AP003170.4-201ENST00000543486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
AP003170.4-201ENST00000543486 KCNA4P22459 653 aa20.84■□□□□ 0.93
AP003170.4-201ENST00000543486 U3KPZ7 1027 aaPredicted RBP20.5■□□□□ 0.87
AP003170.4-201ENST00000543486 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
AP003170.4-201ENST00000543486 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
AP003170.4-201ENST00000543486 CAPN15O75808 1086 aa20.21■□□□□ 0.83
AP003170.4-201ENST00000543486 DSG3P32926 999 aa20.06■□□□□ 0.8
AP003170.4-201ENST00000543486 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
AP003170.4-201ENST00000543486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
AP003170.4-201ENST00000543486 APLP2Q06481 763 aa19.79■□□□□ 0.76
AP003170.4-201ENST00000543486 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
AP003170.4-201ENST00000543486 ABCB7O75027 752 aa19.78■□□□□ 0.76
AP003170.4-201ENST00000543486 ZNF219Q9P2Y4 722 aaPredicted RBP19.73■□□□□ 0.75
AP003170.4-201ENST00000543486 SAMD1Q6SPF0 538 aaPredicted RBP19.71■□□□□ 0.75
AP003170.4-201ENST00000543486 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
AP003170.4-201ENST00000543486 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
AP003170.4-201ENST00000543486 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
AP003170.4-201ENST00000543486 POLA2Q14181 598 aa19.32■□□□□ 0.68
AP003170.4-201ENST00000543486 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
AP003170.4-201ENST00000543486 POTEHQ6S545 545 aa19.24■□□□□ 0.67
AP003170.4-201ENST00000543486 ZBTB22O15209 634 aa19.16■□□□□ 0.66
AP003170.4-201ENST00000543486 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
AP003170.4-201ENST00000543486 ZBTB12Q9Y330 459 aaPredicted RBP18.8■□□□□ 0.6
AP003170.4-201ENST00000543486 CHRDL2Q6WN34 429 aa18.72■□□□□ 0.59
AP003170.4-201ENST00000543486 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
AP003170.4-201ENST00000543486 ATXN8OSP0DMR3 200 aa18.71■□□□□ 0.59
AP003170.4-201ENST00000543486 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
AP003170.4-201ENST00000543486 REM2Q8IYK8 340 aaPredicted RBP18.53■□□□□ 0.56
AP003170.4-201ENST00000543486 FBLN2P98095 1184 aa18.4■□□□□ 0.54
AP003170.4-201ENST00000543486 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
AP003170.4-201ENST00000543486 MKRN4PQ13434 485 aaPredicted RBP18.33■□□□□ 0.52
AP003170.4-201ENST00000543486 PIP4P2Q8N4L2 257 aa18.3■□□□□ 0.52
AP003170.4-201ENST00000543486 SPDYE2BA6NHP3 402 aa18.26■□□□□ 0.51
AP003170.4-201ENST00000543486 SPDYE6P0CI01 402 aa18.26■□□□□ 0.51
AP003170.4-201ENST00000543486 SPDYE2Q495Y8 402 aa18.26■□□□□ 0.51
AP003170.4-201ENST00000543486 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
AP003170.4-201ENST00000543486 FXR2P51116 673 aaKnown RBP eCLIP18.15■□□□□ 0.5
AP003170.4-201ENST00000543486 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
AP003170.4-201ENST00000543486 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
AP003170.4-201ENST00000543486 CLEC11AQ9Y240 323 aa18.03■□□□□ 0.48
AP003170.4-201ENST00000543486 SSUH2Q9Y2M2 353 aa18.02■□□□□ 0.48
AP003170.4-201ENST00000543486 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
AP003170.4-201ENST00000543486 HAX1O00165 279 aa18■□□□□ 0.47
AP003170.4-201ENST00000543486 SPDYE1Q8NFV5 336 aaPredicted RBP17.97■□□□□ 0.47
AP003170.4-201ENST00000543486 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
AP003170.4-201ENST00000543486 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
AP003170.4-201ENST00000543486 EVX2Q03828 476 aa17.82■□□□□ 0.44
AP003170.4-201ENST00000543486 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
AP003170.4-201ENST00000543486 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
AP003170.4-201ENST00000543486 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
AP003170.4-201ENST00000543486 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
AP003170.4-201ENST00000543486 FARP1Q9Y4F1 1045 aaPredicted RBP17.38■□□□□ 0.37
AP003170.4-201ENST00000543486 GABBR2O75899 941 aa17.35■□□□□ 0.37
AP003170.4-201ENST00000543486 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
AP003170.4-201ENST00000543486 CREBZFQ9NS37 354 aa17.25■□□□□ 0.35
AP003170.4-201ENST00000543486 STAG3Q9UJ98 1225 aa17.25■□□□□ 0.35
AP003170.4-201ENST00000543486 ZRANB1Q9UGI0 708 aa17.07■□□□□ 0.32
AP003170.4-201ENST00000543486 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
AP003170.4-201ENST00000543486 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
AP003170.4-201ENST00000543486 MNX1P50219 401 aaPredicted RBP16.92■□□□□ 0.3
AP003170.4-201ENST00000543486 PROM2Q8N271 834 aa16.92■□□□□ 0.3
AP003170.4-201ENST00000543486 LHX8Q68G74 356 aa16.91■□□□□ 0.3
AP003170.4-201ENST00000543486 CLCN6P51797 869 aa16.89■□□□□ 0.29
AP003170.4-201ENST00000543486 NPM1P06748 294 aaKnown RBP eCLIP16.87■□□□□ 0.29
AP003170.4-201ENST00000543486 DCBLD2Q96PD2 775 aa16.86■□□□□ 0.29
AP003170.4-201ENST00000543486 GALR2O43603 387 aaPredicted RBP16.85■□□□□ 0.29
AP003170.4-201ENST00000543486 PHF12Q96QT6 1004 aa16.85■□□□□ 0.29
AP003170.4-201ENST00000543486 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
AP003170.4-201ENST00000543486 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
AP003170.4-201ENST00000543486 MIER1Q8N108 512 aa16.65■□□□□ 0.26
AP003170.4-201ENST00000543486 MS4A3Q96HJ5 214 aa16.6■□□□□ 0.25
AP003170.4-201ENST00000543486 FKBP8Q14318 412 aa16.56■□□□□ 0.24
AP003170.4-201ENST00000543486 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
AP003170.4-201ENST00000543486 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
AP003170.4-201ENST00000543486 CCDC61Q9Y6R9 512 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms