RNA–Protein interactions for RNA: ENST00000542600.1

DEFB109F-202, Transcript of defensin beta 109F (pseudogene), humanhuman

TSL 2 BASIC

Gene DEFB109F, Length 509 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB109F-202ENST00000542600 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
DEFB109F-202ENST00000542600 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
DEFB109F-202ENST00000542600 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
DEFB109F-202ENST00000542600 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
DEFB109F-202ENST00000542600 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
DEFB109F-202ENST00000542600 FOXD1Q16676 465 aa19.34■□□□□ 0.69
DEFB109F-202ENST00000542600 ADRA2BP18089 450 aa19.07■□□□□ 0.64
DEFB109F-202ENST00000542600 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
DEFB109F-202ENST00000542600 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
DEFB109F-202ENST00000542600 KCNA4P22459 653 aa18.24■□□□□ 0.51
DEFB109F-202ENST00000542600 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
DEFB109F-202ENST00000542600 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
DEFB109F-202ENST00000542600 MSH5O43196 834 aa17.62■□□□□ 0.41
DEFB109F-202ENST00000542600 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
DEFB109F-202ENST00000542600 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
DEFB109F-202ENST00000542600 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
DEFB109F-202ENST00000542600 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
DEFB109F-202ENST00000542600 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.37
DEFB109F-202ENST00000542600 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
DEFB109F-202ENST00000542600 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
DEFB109F-202ENST00000542600 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
DEFB109F-202ENST00000542600 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
DEFB109F-202ENST00000542600 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
DEFB109F-202ENST00000542600 ZBTB22O15209 634 aa16.78■□□□□ 0.28
DEFB109F-202ENST00000542600 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
DEFB109F-202ENST00000542600 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
DEFB109F-202ENST00000542600 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
DEFB109F-202ENST00000542600 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
DEFB109F-202ENST00000542600 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
DEFB109F-202ENST00000542600 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
DEFB109F-202ENST00000542600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.13
DEFB109F-202ENST00000542600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
DEFB109F-202ENST00000542600 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
DEFB109F-202ENST00000542600 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
DEFB109F-202ENST00000542600 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
DEFB109F-202ENST00000542600 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
DEFB109F-202ENST00000542600 FKBP8Q14318 412 aa15.48■□□□□ 0.07
DEFB109F-202ENST00000542600 APLP2Q06481 763 aa15.42■□□□□ 0.06
DEFB109F-202ENST00000542600 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
DEFB109F-202ENST00000542600 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
DEFB109F-202ENST00000542600 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
DEFB109F-202ENST00000542600 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
DEFB109F-202ENST00000542600 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
DEFB109F-202ENST00000542600 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
DEFB109F-202ENST00000542600 POTEDQ86YR6 584 aa15.02■□□□□ -0
DEFB109F-202ENST00000542600 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
DEFB109F-202ENST00000542600 CAPN15O75808 1086 aa14.98□□□□□ -0.01
DEFB109F-202ENST00000542600 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
DEFB109F-202ENST00000542600 POLA2Q14181 598 aa14.95□□□□□ -0.02
DEFB109F-202ENST00000542600 FBLN2P98095 1184 aa14.94□□□□□ -0.02
DEFB109F-202ENST00000542600 SPDYE4A6NLX3 237 aa14.92□□□□□ -0.02
DEFB109F-202ENST00000542600 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
DEFB109F-202ENST00000542600 PROM2Q8N271 834 aa14.79□□□□□ -0.04
DEFB109F-202ENST00000542600 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
DEFB109F-202ENST00000542600 ABCB7O75027 752 aa14.75□□□□□ -0.05
DEFB109F-202ENST00000542600 DSG3P32926 999 aa14.61□□□□□ -0.07
DEFB109F-202ENST00000542600 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
DEFB109F-202ENST00000542600 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
DEFB109F-202ENST00000542600 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
DEFB109F-202ENST00000542600 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
DEFB109F-202ENST00000542600 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
DEFB109F-202ENST00000542600 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
DEFB109F-202ENST00000542600 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
DEFB109F-202ENST00000542600 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
DEFB109F-202ENST00000542600 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
DEFB109F-202ENST00000542600 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
DEFB109F-202ENST00000542600 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
DEFB109F-202ENST00000542600 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
DEFB109F-202ENST00000542600 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
DEFB109F-202ENST00000542600 PKD2Q13563 968 aa14.15□□□□□ -0.14
DEFB109F-202ENST00000542600 SPOCK2Q92563 424 aa14.15□□□□□ -0.14
DEFB109F-202ENST00000542600 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
DEFB109F-202ENST00000542600 MIER1Q8N108 512 aa14.08□□□□□ -0.16
DEFB109F-202ENST00000542600 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
DEFB109F-202ENST00000542600 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
DEFB109F-202ENST00000542600 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
DEFB109F-202ENST00000542600 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
DEFB109F-202ENST00000542600 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
DEFB109F-202ENST00000542600 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
DEFB109F-202ENST00000542600 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
DEFB109F-202ENST00000542600 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
DEFB109F-202ENST00000542600 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
DEFB109F-202ENST00000542600 RGL2O15211 777 aa13.8□□□□□ -0.2
DEFB109F-202ENST00000542600 BBXQ8WY36 941 aaPredicted RBP13.76□□□□□ -0.21
DEFB109F-202ENST00000542600 HAP1P54257 671 aaPredicted RBP13.75□□□□□ -0.21
DEFB109F-202ENST00000542600 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
DEFB109F-202ENST00000542600 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
DEFB109F-202ENST00000542600 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
DEFB109F-202ENST00000542600 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
DEFB109F-202ENST00000542600 CLEC11AQ9Y240 323 aa13.73□□□□□ -0.21
DEFB109F-202ENST00000542600 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
DEFB109F-202ENST00000542600 GSE1Q14687 1217 aa13.68□□□□□ -0.22
DEFB109F-202ENST00000542600 NUBP1P53384 320 aa13.67□□□□□ -0.22
DEFB109F-202ENST00000542600 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
DEFB109F-202ENST00000542600 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
DEFB109F-202ENST00000542600 PAXIP1Q6ZW49 1069 aaPredicted RBP13.6□□□□□ -0.23
DEFB109F-202ENST00000542600 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
DEFB109F-202ENST00000542600 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
DEFB109F-202ENST00000542600 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
DEFB109F-202ENST00000542600 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms