RNA–Protein interactions for RNA: ENST00000542248.5

LINC00944-203, long intergenic non-protein coding RNA 944, humanhuman

TSL 4 BASIC

Gene LINC00944, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00944-203ENST00000542248 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
LINC00944-203ENST00000542248 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
LINC00944-203ENST00000542248 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
LINC00944-203ENST00000542248 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
LINC00944-203ENST00000542248 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
LINC00944-203ENST00000542248 FOXD1Q16676 465 aa16.42■□□□□ 0.22
LINC00944-203ENST00000542248 ADRA2BP18089 450 aa15.92■□□□□ 0.14
LINC00944-203ENST00000542248 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
LINC00944-203ENST00000542248 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
LINC00944-203ENST00000542248 MSH5O43196 834 aa15.13■□□□□ 0.01
LINC00944-203ENST00000542248 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
LINC00944-203ENST00000542248 KCNA4P22459 653 aa14.61□□□□□ -0.07
LINC00944-203ENST00000542248 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
LINC00944-203ENST00000542248 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
LINC00944-203ENST00000542248 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
LINC00944-203ENST00000542248 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
LINC00944-203ENST00000542248 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
LINC00944-203ENST00000542248 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
LINC00944-203ENST00000542248 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
LINC00944-203ENST00000542248 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
LINC00944-203ENST00000542248 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
LINC00944-203ENST00000542248 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
LINC00944-203ENST00000542248 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
LINC00944-203ENST00000542248 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
LINC00944-203ENST00000542248 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
LINC00944-203ENST00000542248 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
LINC00944-203ENST00000542248 ZBTB22O15209 634 aa13.43□□□□□ -0.26
LINC00944-203ENST00000542248 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
LINC00944-203ENST00000542248 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
LINC00944-203ENST00000542248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00944-203ENST00000542248 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
LINC00944-203ENST00000542248 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
LINC00944-203ENST00000542248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
LINC00944-203ENST00000542248 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
LINC00944-203ENST00000542248 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
LINC00944-203ENST00000542248 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
LINC00944-203ENST00000542248 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
LINC00944-203ENST00000542248 APLP2Q06481 763 aa12.86□□□□□ -0.35
LINC00944-203ENST00000542248 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
LINC00944-203ENST00000542248 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
LINC00944-203ENST00000542248 CAPN15O75808 1086 aa12.69□□□□□ -0.38
LINC00944-203ENST00000542248 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
LINC00944-203ENST00000542248 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
LINC00944-203ENST00000542248 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
LINC00944-203ENST00000542248 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
LINC00944-203ENST00000542248 ABCB7O75027 752 aa12.46□□□□□ -0.41
LINC00944-203ENST00000542248 POLA2Q14181 598 aa12.43□□□□□ -0.42
LINC00944-203ENST00000542248 DSG3P32926 999 aa12.37□□□□□ -0.43
LINC00944-203ENST00000542248 FBLN2P98095 1184 aa12.3□□□□□ -0.44
LINC00944-203ENST00000542248 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
LINC00944-203ENST00000542248 FKBP8Q14318 412 aa12.23□□□□□ -0.45
LINC00944-203ENST00000542248 MKRN4PQ13434 485 aaPredicted RBP12.22□□□□□ -0.45
LINC00944-203ENST00000542248 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
LINC00944-203ENST00000542248 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
LINC00944-203ENST00000542248 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
LINC00944-203ENST00000542248 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
LINC00944-203ENST00000542248 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
LINC00944-203ENST00000542248 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
LINC00944-203ENST00000542248 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
LINC00944-203ENST00000542248 SSUH2Q9Y2M2 353 aa11.83□□□□□ -0.52
LINC00944-203ENST00000542248 PROM2Q8N271 834 aa11.8□□□□□ -0.52
LINC00944-203ENST00000542248 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00944-203ENST00000542248 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
LINC00944-203ENST00000542248 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
LINC00944-203ENST00000542248 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
LINC00944-203ENST00000542248 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
LINC00944-203ENST00000542248 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
LINC00944-203ENST00000542248 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
LINC00944-203ENST00000542248 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
LINC00944-203ENST00000542248 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
LINC00944-203ENST00000542248 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
LINC00944-203ENST00000542248 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
LINC00944-203ENST00000542248 MIER1Q8N108 512 aa11.43□□□□□ -0.58
LINC00944-203ENST00000542248 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
LINC00944-203ENST00000542248 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
LINC00944-203ENST00000542248 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
LINC00944-203ENST00000542248 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
LINC00944-203ENST00000542248 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
LINC00944-203ENST00000542248 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
LINC00944-203ENST00000542248 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
LINC00944-203ENST00000542248 SPOCK2Q92563 424 aa11.27□□□□□ -0.61
LINC00944-203ENST00000542248 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
LINC00944-203ENST00000542248 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
LINC00944-203ENST00000542248 PRKAR2AP13861 404 aaKnown RBP11.18□□□□□ -0.62
LINC00944-203ENST00000542248 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00944-203ENST00000542248 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
LINC00944-203ENST00000542248 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC00944-203ENST00000542248 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
LINC00944-203ENST00000542248 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
LINC00944-203ENST00000542248 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
LINC00944-203ENST00000542248 NUBP1P53384 320 aa11.07□□□□□ -0.64
LINC00944-203ENST00000542248 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
LINC00944-203ENST00000542248 PKD2Q13563 968 aa11.05□□□□□ -0.64
LINC00944-203ENST00000542248 ECM2O94769 699 aaPredicted RBP11.03□□□□□ -0.64
LINC00944-203ENST00000542248 GSE1Q14687 1217 aa11.03□□□□□ -0.64
LINC00944-203ENST00000542248 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
LINC00944-203ENST00000542248 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
LINC00944-203ENST00000542248 DCAF8L2P0C7V8 631 aa11□□□□□ -0.65
LINC00944-203ENST00000542248 TSPYL2Q9H2G4 693 aaPredicted RBP10.97□□□□□ -0.65
LINC00944-203ENST00000542248 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms