RNA–Protein interactions for RNA: ENST00000542232.6

RIMKLB-211, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 3

Gene RIMKLB, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-211ENST00000542232 AEBP2Q6ZN18 517 aaPredicted RBP45.83■■■■■ 4.93
RIMKLB-211ENST00000542232 CHIC1Q5VXU3 224 aa43.59■■■■■ 4.57
RIMKLB-211ENST00000542232 SENP3Q9H4L4 574 aaPredicted RBP38.97■■■■□ 3.83
RIMKLB-211ENST00000542232 PHF23Q9BUL5 403 aaPredicted RBP38.52■■■■□ 3.76
RIMKLB-211ENST00000542232 FOXD1Q16676 465 aa36.37■■■■□ 3.41
RIMKLB-211ENST00000542232 PLPPR3Q6T4P5 718 aa34.85■■■■□ 3.17
RIMKLB-211ENST00000542232 PPP6R1Q9UPN7 881 aa34.15■■■■□ 3.06
RIMKLB-211ENST00000542232 ADRA2BP18089 450 aa34.02■■■■□ 3.04
RIMKLB-211ENST00000542232 PIAS4Q8N2W9 510 aaPredicted RBP33.97■■■■□ 3.03
RIMKLB-211ENST00000542232 MSH5O43196 834 aa33.91■■■■□ 3.02
RIMKLB-211ENST00000542232 POTEDQ86YR6 584 aa32.95■■■□□ 2.87
RIMKLB-211ENST00000542232 MAPK8IP2Q13387 824 aaPredicted RBP31.22■■■□□ 2.59
RIMKLB-211ENST00000542232 SCAF1Q9H7N4 1312 aaKnown RBP31.02■■■□□ 2.56
RIMKLB-211ENST00000542232 DMRT2Q9Y5R5 561 aa30.96■■■□□ 2.55
RIMKLB-211ENST00000542232 PPP4R3CPQ6ZMV5 832 aa30.59■■■□□ 2.49
RIMKLB-211ENST00000542232 CNKSR2Q8WXI2 1034 aa29.96■■■□□ 2.39
RIMKLB-211ENST00000542232 HOXD11P31277 338 aaPredicted RBP29.88■■■□□ 2.37
RIMKLB-211ENST00000542232 RNF216Q9NWF9 866 aaPredicted RBP29.67■■■□□ 2.34
RIMKLB-211ENST00000542232 DCAF8L1A6NGE4 600 aa29.63■■■□□ 2.33
RIMKLB-211ENST00000542232 NCBP3Q53F19 620 aaKnown RBP29.39■■■□□ 2.3
RIMKLB-211ENST00000542232 NPM3O75607 178 aaKnown RBP29.05■■■□□ 2.24
RIMKLB-211ENST00000542232 CACNB1Q02641 598 aaPredicted RBP29.03■■■□□ 2.24
RIMKLB-211ENST00000542232 RNF39Q9H2S5 420 aa29.01■■■□□ 2.23
RIMKLB-211ENST00000542232 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
RIMKLB-211ENST00000542232 KCNA4P22459 653 aa28.62■■■□□ 2.17
RIMKLB-211ENST00000542232 C1QBPQ07021 282 aaKnown RBP28.55■■■□□ 2.16
RIMKLB-211ENST00000542232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.42■■■□□ 2.145e-6■□□□□ 11.1
RIMKLB-211ENST00000542232 U3KPZ7 1027 aaPredicted RBP27.89■■■□□ 2.06
RIMKLB-211ENST00000542232 SLC4A2P04920 1241 aa27.73■■■□□ 2.03
RIMKLB-211ENST00000542232 SPINK5Q9NQ38 1064 aaPredicted RBP27.46■■□□□ 1.99
RIMKLB-211ENST00000542232 CAPN15O75808 1086 aa27.35■■□□□ 1.97
RIMKLB-211ENST00000542232 DSG3P32926 999 aa27.21■■□□□ 1.95
RIMKLB-211ENST00000542232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
RIMKLB-211ENST00000542232 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
RIMKLB-211ENST00000542232 APLP2Q06481 763 aa27.01■■□□□ 1.91
RIMKLB-211ENST00000542232 SLC4A1APQ9BWU0 796 aaKnown RBP27■■□□□ 1.91
RIMKLB-211ENST00000542232 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
RIMKLB-211ENST00000542232 SAMD1Q6SPF0 538 aaPredicted RBP26.93■■□□□ 1.9
RIMKLB-211ENST00000542232 ZNF219Q9P2Y4 722 aaPredicted RBP26.88■■□□□ 1.89
RIMKLB-211ENST00000542232 MYCNP04198 464 aaPredicted RBP26.82■■□□□ 1.88
RIMKLB-211ENST00000542232 ABCB7O75027 752 aa26.76■■□□□ 1.87
RIMKLB-211ENST00000542232 FOXD4L1Q9NU39 408 aa26.62■■□□□ 1.85
RIMKLB-211ENST00000542232 ZBTB22O15209 634 aa26.36■■□□□ 1.81
RIMKLB-211ENST00000542232 ATF5Q9Y2D1 282 aaPredicted RBP26.28■■□□□ 1.8
RIMKLB-211ENST00000542232 POLA2Q14181 598 aa26.27■■□□□ 1.8
RIMKLB-211ENST00000542232 RBM42Q9BTD8 480 aaKnown RBP25.87■■□□□ 1.73
RIMKLB-211ENST00000542232 POTEHQ6S545 545 aa25.83■■□□□ 1.73
RIMKLB-211ENST00000542232 ATXN8OSP0DMR3 200 aa25.78■■□□□ 1.72
RIMKLB-211ENST00000542232 ZBTB12Q9Y330 459 aaPredicted RBP25.69■■□□□ 1.7
RIMKLB-211ENST00000542232 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
RIMKLB-211ENST00000542232 AKT1S1Q96B36 256 aa25.35■■□□□ 1.65
RIMKLB-211ENST00000542232 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
RIMKLB-211ENST00000542232 CSRNP3Q8WYN3 585 aa25.22■■□□□ 1.63
RIMKLB-211ENST00000542232 REM2Q8IYK8 340 aaPredicted RBP25.14■■□□□ 1.62
RIMKLB-211ENST00000542232 FBLN2P98095 1184 aa25.12■■□□□ 1.61
RIMKLB-211ENST00000542232 MKRN4PQ13434 485 aaPredicted RBP25.07■■□□□ 1.6
RIMKLB-211ENST00000542232 SPDYE2BA6NHP3 402 aa24.94■■□□□ 1.58
RIMKLB-211ENST00000542232 SPDYE6P0CI01 402 aa24.94■■□□□ 1.58
RIMKLB-211ENST00000542232 SPDYE2Q495Y8 402 aa24.94■■□□□ 1.58
RIMKLB-211ENST00000542232 EHMT2Q96KQ7 1210 aa24.93■■□□□ 1.58
RIMKLB-211ENST00000542232 PITPNM1O00562 1244 aa24.88■■□□□ 1.57
RIMKLB-211ENST00000542232 PIP4P2Q8N4L2 257 aa24.77■■□□□ 1.56
RIMKLB-211ENST00000542232 ZNF692Q9BU19 519 aaPredicted RBP24.67■■□□□ 1.54
RIMKLB-211ENST00000542232 SSUH2Q9Y2M2 353 aa24.67■■□□□ 1.54
RIMKLB-211ENST00000542232 FXR2P51116 673 aaKnown RBP eCLIP24.64■■□□□ 1.54
RIMKLB-211ENST00000542232 SPDYE1Q8NFV5 336 aaPredicted RBP24.46■■□□□ 1.51
RIMKLB-211ENST00000542232 CLEC11AQ9Y240 323 aa24.42■■□□□ 1.5
RIMKLB-211ENST00000542232 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
RIMKLB-211ENST00000542232 SP7Q8TDD2 431 aaPredicted RBP24.27■■□□□ 1.48
RIMKLB-211ENST00000542232 HAX1O00165 279 aa24.23■■□□□ 1.47
RIMKLB-211ENST00000542232 PRKAR2AP13861 404 aaKnown RBP24.21■■□□□ 1.47
RIMKLB-211ENST00000542232 PRR29P0C7W0 189 aa24.04■■□□□ 1.44
RIMKLB-211ENST00000542232 EVX2Q03828 476 aa24.04■■□□□ 1.44
RIMKLB-211ENST00000542232 CHADLQ6NUI6 762 aa23.99■■□□□ 1.43
RIMKLB-211ENST00000542232 SPDYE4A6NLX3 237 aa23.89■■□□□ 1.41
RIMKLB-211ENST00000542232 C19orf67A6NJJ6 358 aa23.84■■□□□ 1.41
RIMKLB-211ENST00000542232 STAG3Q9UJ98 1225 aa23.63■■□□□ 1.37
RIMKLB-211ENST00000542232 FARP1Q9Y4F1 1045 aaPredicted RBP23.63■■□□□ 1.37
RIMKLB-211ENST00000542232 CREBZFQ9NS37 354 aa23.53■■□□□ 1.36
RIMKLB-211ENST00000542232 GABBR2O75899 941 aa23.45■■□□□ 1.34
RIMKLB-211ENST00000542232 CD44P16070 742 aaKnown RBP23.44■■□□□ 1.34
RIMKLB-211ENST00000542232 PROM2Q8N271 834 aa23.38■■□□□ 1.33
RIMKLB-211ENST00000542232 MNX1P50219 401 aaPredicted RBP23.18■■□□□ 1.3
RIMKLB-211ENST00000542232 ZRANB1Q9UGI0 708 aa23.13■■□□□ 1.29
RIMKLB-211ENST00000542232 ZNF579Q8NAF0 562 aaKnown RBP23.1■■□□□ 1.29
RIMKLB-211ENST00000542232 CLCN6P51797 869 aa23.05■■□□□ 1.28
RIMKLB-211ENST00000542232 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
RIMKLB-211ENST00000542232 POTEIP0CG38 1075 aa23■■□□□ 1.27
RIMKLB-211ENST00000542232 PAK3O75914 559 aaPredicted RBP22.9■■□□□ 1.26
RIMKLB-211ENST00000542232 PHF12Q96QT6 1004 aa22.85■■□□□ 1.25
RIMKLB-211ENST00000542232 GALR2O43603 387 aaPredicted RBP22.84■■□□□ 1.25
RIMKLB-211ENST00000542232 FKBP8Q14318 412 aa22.83■■□□□ 1.25
RIMKLB-211ENST00000542232 DCBLD2Q96PD2 775 aa22.79■■□□□ 1.24
RIMKLB-211ENST00000542232 LHX8Q68G74 356 aa22.75■■□□□ 1.23
RIMKLB-211ENST00000542232 MIER1Q8N108 512 aa22.75■■□□□ 1.23
RIMKLB-211ENST00000542232 PLEKHG5O94827 1062 aa22.65■■□□□ 1.22
RIMKLB-211ENST00000542232 TSPYL2Q9H2G4 693 aaPredicted RBP22.65■■□□□ 1.22
RIMKLB-211ENST00000542232 PLCD3Q8N3E9 789 aa22.57■■□□□ 1.2
RIMKLB-211ENST00000542232 CCDC61Q9Y6R9 512 aa22.57■■□□□ 1.2
RIMKLB-211ENST00000542232 MS4A3Q96HJ5 214 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms