RNA–Protein interactions for RNA: ENST00000542219.1

LINC02421-201, Transcript of long intergenic non-protein coding RNA 2421, humanhuman

TSL 1 (best) BASIC

Gene LINC02421, Length 3,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02421-201ENST00000542219 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
LINC02421-201ENST00000542219 CCDC180Q9P1Z9 1646 aa11.03□□□□□ -0.64
LINC02421-201ENST00000542219 ZCCHC6Q5VYS8 1495 aaKnown RBP10.75□□□□□ -0.69
LINC02421-201ENST00000542219 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
LINC02421-201ENST00000542219 MYO15BQ96JP2 1530 aa10.37□□□□□ -0.75
LINC02421-201ENST00000542219 SHROOM4Q9ULL8 1493 aa10.2□□□□□ -0.78
LINC02421-201ENST00000542219 ABCC9O60706 1549 aa10.17□□□□□ -0.78
LINC02421-201ENST00000542219 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
LINC02421-201ENST00000542219 NACADO15069 1562 aa10.07□□□□□ -0.8
LINC02421-201ENST00000542219 AEBP2Q6ZN18 517 aaPredicted RBP9.95□□□□□ -0.82
LINC02421-201ENST00000542219 SCRIBQ14160 1630 aa9.94□□□□□ -0.82
LINC02421-201ENST00000542219 SUPT5HO00267 1087 aaKnown RBP9.94□□□□□ -0.82
LINC02421-201ENST00000542219 MYT1Q01538 1121 aa9.91□□□□□ -0.82
LINC02421-201ENST00000542219 RB1CC1Q8TDY2 1594 aa9.91□□□□□ -0.82
LINC02421-201ENST00000542219 CHIC1Q5VXU3 224 aa9.9□□□□□ -0.82
LINC02421-201ENST00000542219 RSF1Q96T23 1441 aaPredicted RBP9.88□□□□□ -0.83
LINC02421-201ENST00000542219 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
LINC02421-201ENST00000542219 UNC13AQ9UPW8 1703 aa9.8□□□□□ -0.84
LINC02421-201ENST00000542219 BAZ1AQ9NRL2 1556 aaPredicted RBP9.8□□□□□ -0.84
LINC02421-201ENST00000542219 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
LINC02421-201ENST00000542219 MROH2BQ7Z745 1585 aa9.73□□□□□ -0.85
LINC02421-201ENST00000542219 WIZO95785 1651 aa9.7□□□□□ -0.86
LINC02421-201ENST00000542219 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
LINC02421-201ENST00000542219 SMARCA4P51532 1647 aa9.67□□□□□ -0.86
LINC02421-201ENST00000542219 TOP2AP11388 1531 aaKnown RBP9.66□□□□□ -0.86
LINC02421-201ENST00000542219 PEG3Q9GZU2 1588 aa9.66□□□□□ -0.86
LINC02421-201ENST00000542219 BICRAQ9NZM4 1560 aa9.6□□□□□ -0.87
LINC02421-201ENST00000542219 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
LINC02421-201ENST00000542219 HRCP23327 699 aa9.53□□□□□ -0.88
LINC02421-201ENST00000542219 TTBK1Q5TCY1 1321 aaPredicted RBP9.52□□□□□ -0.88
LINC02421-201ENST00000542219 PRKCSHP14314 528 aaPredicted RBP9.52□□□□□ -0.89
LINC02421-201ENST00000542219 CCDC88BA6NC98 1476 aa9.47□□□□□ -0.89
LINC02421-201ENST00000542219 EEA1Q15075 1411 aa9.41□□□□□ -0.9
LINC02421-201ENST00000542219 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
LINC02421-201ENST00000542219 LOC105371045A0A1W2PR82 267 aa9.4□□□□□ -0.9
LINC02421-201ENST00000542219 TRIM26Q12899 539 aaPredicted RBP9.38□□□□□ -0.91
LINC02421-201ENST00000542219 WRNQ14191 1432 aaPredicted RBP eCLIP9.38□□□□□ -0.91
LINC02421-201ENST00000542219 ABCC8Q09428 1581 aa9.35□□□□□ -0.91
LINC02421-201ENST00000542219 KIF21BO75037 1637 aa9.35□□□□□ -0.91
LINC02421-201ENST00000542219 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
LINC02421-201ENST00000542219 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
LINC02421-201ENST00000542219 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
LINC02421-201ENST00000542219 PCGF6Q9BYE7 350 aa9.33□□□□□ -0.92
LINC02421-201ENST00000542219 PRDM2Q13029 1718 aa9.33□□□□□ -0.92
LINC02421-201ENST00000542219 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
LINC02421-201ENST00000542219 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
LINC02421-201ENST00000542219 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.92
LINC02421-201ENST00000542219 TNIKQ9UKE5 1360 aa9.27□□□□□ -0.93
LINC02421-201ENST00000542219 BAZ1BQ9UIG0 1483 aaKnown RBP9.26□□□□□ -0.93
LINC02421-201ENST00000542219 SCAF1Q9H7N4 1312 aaKnown RBP9.26□□□□□ -0.93
LINC02421-201ENST00000542219 BCL11AQ9H165 835 aa9.25□□□□□ -0.93
LINC02421-201ENST00000542219 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
LINC02421-201ENST00000542219 GOLGA3Q08378 1498 aa9.23□□□□□ -0.93
LINC02421-201ENST00000542219 SOGA1O94964 1423 aa9.21□□□□□ -0.94
LINC02421-201ENST00000542219 CEP162Q5TB80 1403 aa9.21□□□□□ -0.94
LINC02421-201ENST00000542219 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
LINC02421-201ENST00000542219 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
LINC02421-201ENST00000542219 ERICH3Q5RHP9 1530 aa9.2□□□□□ -0.94
LINC02421-201ENST00000542219 APLP2Q06481 763 aa9.19□□□□□ -0.94
LINC02421-201ENST00000542219 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
LINC02421-201ENST00000542219 RUSC2Q8N2Y8 1516 aa9.17□□□□□ -0.94
LINC02421-201ENST00000542219 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
LINC02421-201ENST00000542219 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.95
LINC02421-201ENST00000542219 CFTRP13569 1480 aa9.13□□□□□ -0.95
LINC02421-201ENST00000542219 CSRNP3Q8WYN3 585 aa9.11□□□□□ -0.95
LINC02421-201ENST00000542219 PRXQ9BXM0 1461 aa9.11□□□□□ -0.95
LINC02421-201ENST00000542219 CUX1P39880 1505 aa9.1□□□□□ -0.95
LINC02421-201ENST00000542219 PABPN1Q86U42 306 aaKnown RBP eCLIP9.09□□□□□ -0.95
LINC02421-201ENST00000542219 VPS8Q8N3P4 1428 aa9.07□□□□□ -0.96
LINC02421-201ENST00000542219 RAPGEF2Q9Y4G8 1499 aa9.04□□□□□ -0.96
LINC02421-201ENST00000542219 CLIP1P30622 1438 aa9.02□□□□□ -0.97
LINC02421-201ENST00000542219 ARAP1Q96P48 1450 aa9□□□□□ -0.97
LINC02421-201ENST00000542219 MAP3K1Q13233 1512 aa9□□□□□ -0.97
LINC02421-201ENST00000542219 WDR97A6NE52 1622 aa8.99□□□□□ -0.97
LINC02421-201ENST00000542219 CUX2O14529 1486 aa8.97□□□□□ -0.97
LINC02421-201ENST00000542219 KIF27Q86VH2 1401 aa8.97□□□□□ -0.97
LINC02421-201ENST00000542219 CC2D2AQ9P2K1 1620 aa8.96□□□□□ -0.98
LINC02421-201ENST00000542219 CFAP43Q8NDM7 1665 aa8.95□□□□□ -0.98
LINC02421-201ENST00000542219 DNMBPQ6XZF7 1577 aa8.94□□□□□ -0.98
LINC02421-201ENST00000542219 CUL7Q14999 1698 aa8.94□□□□□ -0.98
LINC02421-201ENST00000542219 CADPSQ9ULU8 1353 aa8.93□□□□□ -0.98
LINC02421-201ENST00000542219 RRBP1Q9P2E9 1410 aaKnown RBP8.92□□□□□ -0.98
LINC02421-201ENST00000542219 CTTNBP2Q8WZ74 1663 aa8.91□□□□□ -0.98
LINC02421-201ENST00000542219 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.98
LINC02421-201ENST00000542219 ARHGAP35Q9NRY4 1499 aa8.9□□□□□ -0.98
LINC02421-201ENST00000542219 ABCA10Q8WWZ4 1543 aa8.9□□□□□ -0.99
LINC02421-201ENST00000542219 CENPBP07199 599 aaPredicted RBP8.89□□□□□ -0.99
LINC02421-201ENST00000542219 FGD5Q6ZNL6 1462 aa8.88□□□□□ -0.99
LINC02421-201ENST00000542219 UBTFP17480 764 aaKnown RBP8.88□□□□□ -0.99
LINC02421-201ENST00000542219 EFCAB5A4FU69 1503 aa8.88□□□□□ -0.99
LINC02421-201ENST00000542219 KIF21AQ7Z4S6 1674 aa8.88□□□□□ -0.99
LINC02421-201ENST00000542219 TIAM1Q13009 1591 aa8.88□□□□□ -0.99
LINC02421-201ENST00000542219 CLSPNQ9HAW4 1339 aa8.88□□□□□ -0.99
LINC02421-201ENST00000542219 ABCA5Q8WWZ7 1642 aa8.87□□□□□ -0.99
LINC02421-201ENST00000542219 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC02421-201ENST00000542219 IGF1RP08069 1367 aa8.85□□□□□ -0.99
LINC02421-201ENST00000542219 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
LINC02421-201ENST00000542219 TOPBP1Q92547 1522 aa8.83□□□□□ -1
LINC02421-201ENST00000542219 SAMD9Q5K651 1589 aa8.83□□□□□ -1
LINC02421-201ENST00000542219 EHMT2Q96KQ7 1210 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms