RNA–Protein interactions for RNA: ENST00000541654.1

ATF7IP-216, Transcript of activating transcription factor 7 interacting protein, humanhuman

TSL 2

Gene ATF7IP, Length 2,688 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7IP-216ENST00000541654 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
ATF7IP-216ENST00000541654 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
ATF7IP-216ENST00000541654 ZCCHC6Q5VYS8 1495 aaKnown RBP13.83□□□□□ -0.2
ATF7IP-216ENST00000541654 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
ATF7IP-216ENST00000541654 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
ATF7IP-216ENST00000541654 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
ATF7IP-216ENST00000541654 MYO15BQ96JP2 1530 aa13.33□□□□□ -0.28
ATF7IP-216ENST00000541654 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
ATF7IP-216ENST00000541654 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
ATF7IP-216ENST00000541654 ABCC9O60706 1549 aa13.07□□□□□ -0.32
ATF7IP-216ENST00000541654 HRCP23327 699 aa13.02□□□□□ -0.32
ATF7IP-216ENST00000541654 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
ATF7IP-216ENST00000541654 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
ATF7IP-216ENST00000541654 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
ATF7IP-216ENST00000541654 LOC105371045A0A1W2PR82 267 aa12.87□□□□□ -0.35
ATF7IP-216ENST00000541654 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
ATF7IP-216ENST00000541654 NACADO15069 1562 aa12.79□□□□□ -0.36
ATF7IP-216ENST00000541654 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
ATF7IP-216ENST00000541654 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
ATF7IP-216ENST00000541654 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
ATF7IP-216ENST00000541654 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
ATF7IP-216ENST00000541654 WIZO95785 1651 aa12.65□□□□□ -0.38
ATF7IP-216ENST00000541654 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
ATF7IP-216ENST00000541654 EIF4G1Q04637 1599 aaKnown RBP12.59□□□□□ -0.39
ATF7IP-216ENST00000541654 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
ATF7IP-216ENST00000541654 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.41
ATF7IP-216ENST00000541654 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
ATF7IP-216ENST00000541654 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
ATF7IP-216ENST00000541654 SMARCA4P51532 1647 aa12.43□□□□□ -0.42
ATF7IP-216ENST00000541654 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
ATF7IP-216ENST00000541654 SMARCA2P51531 1590 aa12.39□□□□□ -0.43
ATF7IP-216ENST00000541654 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
ATF7IP-216ENST00000541654 ABCC8Q09428 1581 aa12.34□□□□□ -0.43
ATF7IP-216ENST00000541654 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
ATF7IP-216ENST00000541654 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
ATF7IP-216ENST00000541654 WRNQ14191 1432 aaPredicted RBP eCLIP12.26□□□□□ -0.45
ATF7IP-216ENST00000541654 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
ATF7IP-216ENST00000541654 SOGA1O94964 1423 aa12.21□□□□□ -0.46
ATF7IP-216ENST00000541654 EEA1Q15075 1411 aa12.18□□□□□ -0.46
ATF7IP-216ENST00000541654 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
ATF7IP-216ENST00000541654 CEP162Q5TB80 1403 aa12.18□□□□□ -0.46
ATF7IP-216ENST00000541654 RUSC2Q8N2Y8 1516 aa12.17□□□□□ -0.46
ATF7IP-216ENST00000541654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.12□□□□□ -0.47
ATF7IP-216ENST00000541654 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
ATF7IP-216ENST00000541654 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
ATF7IP-216ENST00000541654 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
ATF7IP-216ENST00000541654 KIF21BO75037 1637 aa12.08□□□□□ -0.48
ATF7IP-216ENST00000541654 CCER1Q8TC90 406 aaPredicted RBP12.06□□□□□ -0.48
ATF7IP-216ENST00000541654 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
ATF7IP-216ENST00000541654 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
ATF7IP-216ENST00000541654 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
ATF7IP-216ENST00000541654 CEP164Q9UPV0 1460 aa12.01□□□□□ -0.49
ATF7IP-216ENST00000541654 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
ATF7IP-216ENST00000541654 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
ATF7IP-216ENST00000541654 TOP2BQ02880 1626 aa11.96□□□□□ -0.49
ATF7IP-216ENST00000541654 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.49
ATF7IP-216ENST00000541654 TTBK1Q5TCY1 1321 aaPredicted RBP11.94□□□□□ -0.5
ATF7IP-216ENST00000541654 CLIP1P30622 1438 aa11.92□□□□□ -0.5
ATF7IP-216ENST00000541654 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
ATF7IP-216ENST00000541654 VPS8Q8N3P4 1428 aa11.91□□□□□ -0.5
ATF7IP-216ENST00000541654 DIEXFQ68CQ4 756 aaKnown RBP11.91□□□□□ -0.5
ATF7IP-216ENST00000541654 ACIN1Q9UKV3 1341 aaKnown RBP11.89□□□□□ -0.51
ATF7IP-216ENST00000541654 NEUROD1Q13562 356 aa11.86□□□□□ -0.51
ATF7IP-216ENST00000541654 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
ATF7IP-216ENST00000541654 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
ATF7IP-216ENST00000541654 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
ATF7IP-216ENST00000541654 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
ATF7IP-216ENST00000541654 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
ATF7IP-216ENST00000541654 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
ATF7IP-216ENST00000541654 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
ATF7IP-216ENST00000541654 CUX1P39880 1505 aa11.8□□□□□ -0.52
ATF7IP-216ENST00000541654 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
ATF7IP-216ENST00000541654 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.52
ATF7IP-216ENST00000541654 CENPBP07199 599 aaPredicted RBP11.75□□□□□ -0.53
ATF7IP-216ENST00000541654 CFTRP13569 1480 aa11.73□□□□□ -0.53
ATF7IP-216ENST00000541654 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
ATF7IP-216ENST00000541654 APLP2Q06481 763 aa11.72□□□□□ -0.53
ATF7IP-216ENST00000541654 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
ATF7IP-216ENST00000541654 AEBP2Q6ZN18 517 aaPredicted RBP11.69□□□□□ -0.54
ATF7IP-216ENST00000541654 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
ATF7IP-216ENST00000541654 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
ATF7IP-216ENST00000541654 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
ATF7IP-216ENST00000541654 CUX2O14529 1486 aa11.66□□□□□ -0.54
ATF7IP-216ENST00000541654 ARHGAP35Q9NRY4 1499 aa11.66□□□□□ -0.54
ATF7IP-216ENST00000541654 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
ATF7IP-216ENST00000541654 MIER1Q8N108 512 aa11.66□□□□□ -0.54
ATF7IP-216ENST00000541654 RANGAP1P46060 587 aaPredicted RBP11.65□□□□□ -0.54
ATF7IP-216ENST00000541654 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
ATF7IP-216ENST00000541654 IGF1RP08069 1367 aa11.58□□□□□ -0.56
ATF7IP-216ENST00000541654 TIAM1Q13009 1591 aa11.58□□□□□ -0.56
ATF7IP-216ENST00000541654 CCNB3Q8WWL7 1395 aa11.56□□□□□ -0.56
ATF7IP-216ENST00000541654 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
ATF7IP-216ENST00000541654 YTHDC1Q96MU7 727 aaKnown RBP11.54□□□□□ -0.56
ATF7IP-216ENST00000541654 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
ATF7IP-216ENST00000541654 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
ATF7IP-216ENST00000541654 MAPKBP1O60336 1514 aa11.52□□□□□ -0.57
ATF7IP-216ENST00000541654 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
ATF7IP-216ENST00000541654 LRRC9Q6ZRR7 1453 aa11.5□□□□□ -0.57
ATF7IP-216ENST00000541654 CC2D2AQ9P2K1 1620 aa11.48□□□□□ -0.57
ATF7IP-216ENST00000541654 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms