RNA–Protein interactions for RNA: ENST00000540606.5

ATE1-208, Transcript of arginyltransferase 1, humanhuman

TSL 2 BASIC

Gene ATE1, Length 5,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATE1-208ENST00000540606 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
ATE1-208ENST00000540606 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
ATE1-208ENST00000540606 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
ATE1-208ENST00000540606 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
ATE1-208ENST00000540606 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
ATE1-208ENST00000540606 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
ATE1-208ENST00000540606 APLP2Q06481 763 aa21.01■□□□□ 0.95
ATE1-208ENST00000540606 TTBK1Q5TCY1 1321 aaPredicted RBP20.92■□□□□ 0.94
ATE1-208ENST00000540606 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
ATE1-208ENST00000540606 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
ATE1-208ENST00000540606 ATP1B4Q9UN42 357 aaPredicted RBP20.53■□□□□ 0.88
ATE1-208ENST00000540606 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
ATE1-208ENST00000540606 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
ATE1-208ENST00000540606 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
ATE1-208ENST00000540606 CCER1Q8TC90 406 aaPredicted RBP20.2■□□□□ 0.82
ATE1-208ENST00000540606 PPARGC1BQ86YN6 1023 aaKnown RBP20.07■□□□□ 0.8
ATE1-208ENST00000540606 CENPBP07199 599 aaPredicted RBP19.9■□□□□ 0.78
ATE1-208ENST00000540606 ZEB1P37275 1124 aaPredicted RBP19.87■□□□□ 0.77
ATE1-208ENST00000540606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
ATE1-208ENST00000540606 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
ATE1-208ENST00000540606 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
ATE1-208ENST00000540606 MYT1LQ9UL68 1186 aa19.79■□□□□ 0.76
ATE1-208ENST00000540606 ERICH6Q7L0X2 663 aa19.79■□□□□ 0.76
ATE1-208ENST00000540606 ITGAEP38570 1179 aa19.78■□□□□ 0.76
ATE1-208ENST00000540606 NEFLP07196 543 aa19.63■□□□□ 0.73
ATE1-208ENST00000540606 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
ATE1-208ENST00000540606 LOC105371045A0A1W2PR82 267 aa19.58■□□□□ 0.73
ATE1-208ENST00000540606 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
ATE1-208ENST00000540606 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
ATE1-208ENST00000540606 TRIM26Q12899 539 aaPredicted RBP19.46■□□□□ 0.71
ATE1-208ENST00000540606 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATE1-208ENST00000540606 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
ATE1-208ENST00000540606 HRCP23327 699 aa19.26■□□□□ 0.67
ATE1-208ENST00000540606 ABCC9O60706 1549 aa19.17■□□□□ 0.66
ATE1-208ENST00000540606 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
ATE1-208ENST00000540606 FBLN2P98095 1184 aa19.09■□□□□ 0.65
ATE1-208ENST00000540606 DAXXQ9UER7 740 aaPredicted RBP19.09■□□□□ 0.65
ATE1-208ENST00000540606 TRIM52Q96A61 297 aa19.06■□□□□ 0.64
ATE1-208ENST00000540606 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
ATE1-208ENST00000540606 ZNF326Q5BKZ1 582 aaKnown RBP18.93■□□□□ 0.62
ATE1-208ENST00000540606 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
ATE1-208ENST00000540606 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
ATE1-208ENST00000540606 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
ATE1-208ENST00000540606 P3H3Q8IVL6 736 aa18.84■□□□□ 0.61
ATE1-208ENST00000540606 MYT1Q01538 1121 aa18.8■□□□□ 0.6
ATE1-208ENST00000540606 BCANQ96GW7 911 aa18.69■□□□□ 0.58
ATE1-208ENST00000540606 BCL11AQ9H165 835 aa18.66■□□□□ 0.58
ATE1-208ENST00000540606 ZNF777Q9ULD5 760 aaPredicted RBP18.66■□□□□ 0.58
ATE1-208ENST00000540606 SLC24A1O60721 1099 aa18.66■□□□□ 0.58
ATE1-208ENST00000540606 ZNF316A6NFI3 1004 aaPredicted RBP18.62■□□□□ 0.57
ATE1-208ENST00000540606 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
ATE1-208ENST00000540606 ANP32CO43423 234 aa18.57■□□□□ 0.56
ATE1-208ENST00000540606 PLPPR3Q6T4P5 718 aa18.53■□□□□ 0.56
ATE1-208ENST00000540606 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
ATE1-208ENST00000540606 ZBTB47Q9UFB7 747 aaPredicted RBP18.48■□□□□ 0.55
ATE1-208ENST00000540606 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
ATE1-208ENST00000540606 ESF1Q9H501 851 aaKnown RBP18.42■□□□□ 0.54
ATE1-208ENST00000540606 CANXP27824 592 aaKnown RBP18.42■□□□□ 0.54
ATE1-208ENST00000540606 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
ATE1-208ENST00000540606 NEFMP07197 916 aa18.4■□□□□ 0.54
ATE1-208ENST00000540606 GTF3C3Q9Y5Q9 886 aa18.38■□□□□ 0.53
ATE1-208ENST00000540606 STAG3Q9UJ98 1225 aa18.35■□□□□ 0.53
ATE1-208ENST00000540606 NPM1P06748 294 aaKnown RBP eCLIP18.32■□□□□ 0.52
ATE1-208ENST00000540606 CHIC2Q9UKJ5 165 aa18.27■□□□□ 0.52
ATE1-208ENST00000540606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
ATE1-208ENST00000540606 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
ATE1-208ENST00000540606 SALL2Q9Y467 1007 aaPredicted RBP18.19■□□□□ 0.5
ATE1-208ENST00000540606 TONSLQ96HA7 1378 aa18.16■□□□□ 0.5
ATE1-208ENST00000540606 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
ATE1-208ENST00000540606 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
ATE1-208ENST00000540606 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
ATE1-208ENST00000540606 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
ATE1-208ENST00000540606 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
ATE1-208ENST00000540606 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
ATE1-208ENST00000540606 TSPY4P0CV99 314 aa18.08■□□□□ 0.49
ATE1-208ENST00000540606 TSPY10P0CW01 314 aa18.08■□□□□ 0.49
ATE1-208ENST00000540606 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
ATE1-208ENST00000540606 PLEKHG5O94827 1062 aa18.05■□□□□ 0.48
ATE1-208ENST00000540606 KCNH8Q96L42 1107 aa18.02■□□□□ 0.48
ATE1-208ENST00000540606 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
ATE1-208ENST00000540606 HIRIP3Q9BW71 556 aaPredicted RBP17.99■□□□□ 0.47
ATE1-208ENST00000540606 ACIN1Q9UKV3 1341 aaKnown RBP17.99■□□□□ 0.47
ATE1-208ENST00000540606 FKBP8Q14318 412 aa17.99■□□□□ 0.47
ATE1-208ENST00000540606 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
ATE1-208ENST00000540606 A0A0G2JS52 829 aa17.97■□□□□ 0.47
ATE1-208ENST00000540606 ANP32AP39687 249 aaKnown RBP17.97■□□□□ 0.47
ATE1-208ENST00000540606 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
ATE1-208ENST00000540606 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
ATE1-208ENST00000540606 HSP90AA1P07900 732 aaKnown RBP17.92■□□□□ 0.46
ATE1-208ENST00000540606 ZBTB7CA1YPR0 619 aa17.87■□□□□ 0.45
ATE1-208ENST00000540606 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
ATE1-208ENST00000540606 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
ATE1-208ENST00000540606 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
ATE1-208ENST00000540606 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
ATE1-208ENST00000540606 PPP1R15AO75807 674 aaPredicted RBP17.84■□□□□ 0.45
ATE1-208ENST00000540606 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
ATE1-208ENST00000540606 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
ATE1-208ENST00000540606 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
ATE1-208ENST00000540606 CCDC136Q96JN2 1154 aa17.79■□□□□ 0.44
ATE1-208ENST00000540606 ARID4BQ4LE39 1312 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms