RNA–Protein interactions for RNA: ENST00000540399.1

LINC02378-201, Transcript of long intergenic non-protein coding RNA 2378, humanhuman

TSL 5 BASIC

Gene LINC02378, Length 1,003 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02378-201ENST00000540399 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
LINC02378-201ENST00000540399 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
LINC02378-201ENST00000540399 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
LINC02378-201ENST00000540399 PHF23Q9BUL5 403 aaPredicted RBP22.04■■□□□ 1.12
LINC02378-201ENST00000540399 FOXD1Q16676 465 aa20.8■□□□□ 0.92
LINC02378-201ENST00000540399 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
LINC02378-201ENST00000540399 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
LINC02378-201ENST00000540399 ADRA2BP18089 450 aa19.44■□□□□ 0.7
LINC02378-201ENST00000540399 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
LINC02378-201ENST00000540399 MSH5O43196 834 aa19.4■□□□□ 0.7
LINC02378-201ENST00000540399 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
LINC02378-201ENST00000540399 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
LINC02378-201ENST00000540399 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
LINC02378-201ENST00000540399 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
LINC02378-201ENST00000540399 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
LINC02378-201ENST00000540399 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
LINC02378-201ENST00000540399 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
LINC02378-201ENST00000540399 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
LINC02378-201ENST00000540399 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
LINC02378-201ENST00000540399 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
LINC02378-201ENST00000540399 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
LINC02378-201ENST00000540399 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
LINC02378-201ENST00000540399 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
LINC02378-201ENST00000540399 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
LINC02378-201ENST00000540399 KCNA4P22459 653 aa16.36■□□□□ 0.21
LINC02378-201ENST00000540399 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
LINC02378-201ENST00000540399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC02378-201ENST00000540399 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
LINC02378-201ENST00000540399 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
LINC02378-201ENST00000540399 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
LINC02378-201ENST00000540399 CAPN15O75808 1086 aa15.62■□□□□ 0.09
LINC02378-201ENST00000540399 DSG3P32926 999 aa15.56■□□□□ 0.08
LINC02378-201ENST00000540399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
LINC02378-201ENST00000540399 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
LINC02378-201ENST00000540399 APLP2Q06481 763 aa15.46■□□□□ 0.07
LINC02378-201ENST00000540399 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
LINC02378-201ENST00000540399 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
LINC02378-201ENST00000540399 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
LINC02378-201ENST00000540399 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
LINC02378-201ENST00000540399 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
LINC02378-201ENST00000540399 ABCB7O75027 752 aa15.27■□□□□ 0.04
LINC02378-201ENST00000540399 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
LINC02378-201ENST00000540399 ZBTB22O15209 634 aa15.06■□□□□ 0
LINC02378-201ENST00000540399 POLA2Q14181 598 aa15.02■□□□□ -0
LINC02378-201ENST00000540399 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
LINC02378-201ENST00000540399 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
LINC02378-201ENST00000540399 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
LINC02378-201ENST00000540399 POTEHQ6S545 545 aa14.76□□□□□ -0.05
LINC02378-201ENST00000540399 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
LINC02378-201ENST00000540399 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
LINC02378-201ENST00000540399 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
LINC02378-201ENST00000540399 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
LINC02378-201ENST00000540399 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
LINC02378-201ENST00000540399 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
LINC02378-201ENST00000540399 FBLN2P98095 1184 aa14.36□□□□□ -0.11
LINC02378-201ENST00000540399 MKRN4PQ13434 485 aaPredicted RBP14.34□□□□□ -0.11
LINC02378-201ENST00000540399 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
LINC02378-201ENST00000540399 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
LINC02378-201ENST00000540399 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
LINC02378-201ENST00000540399 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
LINC02378-201ENST00000540399 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
LINC02378-201ENST00000540399 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
LINC02378-201ENST00000540399 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
LINC02378-201ENST00000540399 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
LINC02378-201ENST00000540399 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
LINC02378-201ENST00000540399 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
LINC02378-201ENST00000540399 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
LINC02378-201ENST00000540399 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC02378-201ENST00000540399 SP7Q8TDD2 431 aaPredicted RBP13.87□□□□□ -0.19
LINC02378-201ENST00000540399 HAX1O00165 279 aa13.84□□□□□ -0.19
LINC02378-201ENST00000540399 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
LINC02378-201ENST00000540399 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
LINC02378-201ENST00000540399 EVX2Q03828 476 aa13.73□□□□□ -0.21
LINC02378-201ENST00000540399 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
LINC02378-201ENST00000540399 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
LINC02378-201ENST00000540399 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
LINC02378-201ENST00000540399 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
LINC02378-201ENST00000540399 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
LINC02378-201ENST00000540399 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
LINC02378-201ENST00000540399 GABBR2O75899 941 aa13.41□□□□□ -0.26
LINC02378-201ENST00000540399 PROM2Q8N271 834 aa13.4□□□□□ -0.26
LINC02378-201ENST00000540399 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
LINC02378-201ENST00000540399 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
LINC02378-201ENST00000540399 CLCN6P51797 869 aa13.22□□□□□ -0.29
LINC02378-201ENST00000540399 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
LINC02378-201ENST00000540399 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
LINC02378-201ENST00000540399 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC02378-201ENST00000540399 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
LINC02378-201ENST00000540399 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
LINC02378-201ENST00000540399 GALR2O43603 387 aaPredicted RBP13.04□□□□□ -0.32
LINC02378-201ENST00000540399 FKBP8Q14318 412 aa13.04□□□□□ -0.32
LINC02378-201ENST00000540399 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
LINC02378-201ENST00000540399 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
LINC02378-201ENST00000540399 MIER1Q8N108 512 aa13.01□□□□□ -0.33
LINC02378-201ENST00000540399 LHX8Q68G74 356 aa13□□□□□ -0.33
LINC02378-201ENST00000540399 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
LINC02378-201ENST00000540399 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
LINC02378-201ENST00000540399 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
LINC02378-201ENST00000540399 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
LINC02378-201ENST00000540399 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms