RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 QKIQ96PU8 341 aaKnown RBP eCLIP12.82□□□□□ -0.368e-16■■■■■ 60.1
USP10-202ENST00000540269 PABPC4Q13310 644 aaKnown RBP eCLIP13.73□□□□□ -0.213e-13■■■■□ 21.1
USP10-202ENST00000540269 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.92□□□□□ -0.55e-12■■■□□ 16.6
USP10-202ENST00000540269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.342e-11■■□□□ 14.4
USP10-202ENST00000540269 NCBP2P52298 156 aaKnown RBP eCLIP11.7□□□□□ -0.543e-11■■■□□ 15.5
USP10-202ENST00000540269 PRPF4O43172 522 aaKnown RBP eCLIP12.92□□□□□ -0.348e-11■■□□□ 14.2
USP10-202ENST00000540269 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.98□□□□□ -0.332e-10■□□□□ 10.8
USP10-202ENST00000540269 MATR3P43243 847 aaKnown RBP eCLIP13.6□□□□□ -0.235e-10■■□□□ 14.2
USP10-202ENST00000540269 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.41□□□□□ -0.589e-10■□□□□ 9.6
USP10-202ENST00000540269 RBM22Q9NW64 420 aaKnown RBP eCLIP12.57□□□□□ -0.44e-9■■■■■ 32
USP10-202ENST00000540269 HNRNPKP61978 463 aaKnown RBP eCLIP11.25□□□□□ -0.614e-9■■■■■ 29.8
USP10-202ENST00000540269 HNRNPLP14866 589 aaKnown RBP eCLIP12.49□□□□□ -0.418e-9■□□□□ 10.1
USP10-202ENST00000540269 PTBP1P26599 531 aaKnown RBP eCLIP11.27□□□□□ -0.611e-8■■■■■ 44.7
USP10-202ENST00000540269 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.58□□□□□ -0.43e-8■■■■■ 116
USP10-202ENST00000540269 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.18□□□□□ -0.464e-8■■■■■ 70.2
USP10-202ENST00000540269 NKRFO15226 690 aaKnown RBP eCLIP13.97□□□□□ -0.175e-8■□□□□ 10
USP10-202ENST00000540269 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.336e-8■■■□□ 18.4
USP10-202ENST00000540269 RPS3P23396 243 aaKnown RBP eCLIP12.18□□□□□ -0.468e-8■■■■□ 20.8
USP10-202ENST00000540269 RBM15Q96T37 977 aaKnown RBP eCLIP13.06□□□□□ -0.321e-7■■■□□ 14.6
USP10-202ENST00000540269 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.41□□□□□ -0.261e-7■□□□□ 9.9
USP10-202ENST00000540269 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.6□□□□□ -0.071e-7■□□□□ 10.2
USP10-202ENST00000540269 SF3B4Q15427 424 aaKnown RBP eCLIP11.36□□□□□ -0.592e-7■■■■□ 25.7
USP10-202ENST00000540269 LARP4Q71RC2 724 aaKnown RBP eCLIP12.37□□□□□ -0.432e-7■□□□□ 9
USP10-202ENST00000540269 U2AF2P26368 475 aaKnown RBP eCLIP14.36□□□□□ -0.112e-7■■□□□ 13.3
USP10-202ENST00000540269 DDX3XO00571 662 aaKnown RBP eCLIP13.54□□□□□ -0.243e-7■■□□□ 11.9
USP10-202ENST00000540269 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.28□□□□□ -0.284e-7■■■■■ 58.1
USP10-202ENST00000540269 DKC1O60832 514 aaKnown RBP eCLIP13.25□□□□□ -0.294e-7■■■■■ 32.2
USP10-202ENST00000540269 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.134e-7■□□□□ 11.2
USP10-202ENST00000540269 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.915e-7■■■■□ 25.1
USP10-202ENST00000540269 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.385e-7■■■■□ 22.5
USP10-202ENST00000540269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.5□□□□□ -0.255e-7■■■■■ 56.3
USP10-202ENST00000540269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.03■□□□□ -05e-7■■□□□ 12.1
USP10-202ENST00000540269 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.28□□□□□ -0.286e-7■■■■□ 19.8
USP10-202ENST00000540269 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.4□□□□□ -0.426e-7■■■□□ 16.3
USP10-202ENST00000540269 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■■■■□ 23.6
USP10-202ENST00000540269 EFTUD2Q15029 972 aaKnown RBP eCLIP13.01□□□□□ -0.337e-7■■□□□ 11.6
USP10-202ENST00000540269 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.54□□□□□ -0.887e-7■■■■□ 25.2
USP10-202ENST00000540269 DDX6P26196 483 aaKnown RBP eCLIP11.96□□□□□ -0.58e-7■■■□□ 14.6
USP10-202ENST00000540269 EIF4G2P78344 907 aaKnown RBP eCLIP17.42■□□□□ 0.388e-7■■■■□ 22.3
USP10-202ENST00000540269 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.519e-7■■■■■ 27.8
USP10-202ENST00000540269 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.699e-7■■■■■ 48.3
USP10-202ENST00000540269 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■■□□ 16.3
USP10-202ENST00000540269 HNRNPCP07910 306 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■□□□ 11.5
USP10-202ENST00000540269 ZNF622Q969S3 477 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■□□□□ 9.2
USP10-202ENST00000540269 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■□□□ 14.1
USP10-202ENST00000540269 FMR1Q06787 632 aaKnown RBP eCLIP14.21□□□□□ -0.131e-6■■□□□ 11.9
USP10-202ENST00000540269 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.221e-6■■■□□ 17.9
USP10-202ENST00000540269 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■□□□□ 10.5
USP10-202ENST00000540269 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■■□□□ 13.5
USP10-202ENST00000540269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.27■□□□□ 0.351e-6■■■□□ 18.3
USP10-202ENST00000540269 PCBP2Q15366 365 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■□□□ 12.4
USP10-202ENST00000540269 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■□□ 16.2
USP10-202ENST00000540269 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.142e-6■■■■■ 37.1
USP10-202ENST00000540269 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■□□□ 14.5
USP10-202ENST00000540269 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■□□□ 13.3
USP10-202ENST00000540269 SF3B1O75533 1304 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■■■■ 56.9
USP10-202ENST00000540269 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.53□□□□□ -0.083e-6■■□□□ 14.1
USP10-202ENST00000540269 CSTF2P33240 577 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■□□□□ 10.1
USP10-202ENST00000540269 ZC3H11AO75152 810 aaKnown RBP eCLIP13.23□□□□□ -0.293e-6■■■□□ 16.5
USP10-202ENST00000540269 GRSF1Q12849 480 aaKnown RBP eCLIP11.91□□□□□ -0.54e-6■■□□□ 12
USP10-202ENST00000540269 G3BP1Q13283 466 aaKnown RBP eCLIP14.99□□□□□ -0.014e-6■■□□□ 13.9
USP10-202ENST00000540269 PCBP1Q15365 356 aaKnown RBP eCLIP12.77□□□□□ -0.374e-6■■■□□ 14.8
USP10-202ENST00000540269 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.34e-6■□□□□ 9.9
USP10-202ENST00000540269 PUS1Q9Y606 427 aaKnown RBP eCLIP10.33□□□□□ -0.761e-5■■■■■ 49.7
Retrieved 64 of 64 RNA–protein pairs in 31.3 ms