RNA–Protein interactions for RNA: ENST00000539994.5

GTF2H3-208, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 4

Gene GTF2H3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-208ENST00000539994 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
GTF2H3-208ENST00000539994 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
GTF2H3-208ENST00000539994 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
GTF2H3-208ENST00000539994 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
GTF2H3-208ENST00000539994 FOXD1Q16676 465 aa17.1■□□□□ 0.33
GTF2H3-208ENST00000539994 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
GTF2H3-208ENST00000539994 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
GTF2H3-208ENST00000539994 ADRA2BP18089 450 aa15.9■□□□□ 0.14
GTF2H3-208ENST00000539994 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
GTF2H3-208ENST00000539994 MSH5O43196 834 aa15.89■□□□□ 0.13
GTF2H3-208ENST00000539994 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
GTF2H3-208ENST00000539994 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
GTF2H3-208ENST00000539994 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
GTF2H3-208ENST00000539994 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
GTF2H3-208ENST00000539994 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
GTF2H3-208ENST00000539994 HOXD11P31277 338 aaPredicted RBP13.92□□□□□ -0.18
GTF2H3-208ENST00000539994 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
GTF2H3-208ENST00000539994 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
GTF2H3-208ENST00000539994 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
GTF2H3-208ENST00000539994 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
GTF2H3-208ENST00000539994 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
GTF2H3-208ENST00000539994 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
GTF2H3-208ENST00000539994 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
GTF2H3-208ENST00000539994 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
GTF2H3-208ENST00000539994 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
GTF2H3-208ENST00000539994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
GTF2H3-208ENST00000539994 KCNA4P22459 653 aa13.14□□□□□ -0.31
GTF2H3-208ENST00000539994 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
GTF2H3-208ENST00000539994 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
GTF2H3-208ENST00000539994 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
GTF2H3-208ENST00000539994 CAPN15O75808 1086 aa12.76□□□□□ -0.37
GTF2H3-208ENST00000539994 DSG3P32926 999 aa12.76□□□□□ -0.37
GTF2H3-208ENST00000539994 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
GTF2H3-208ENST00000539994 ABCB7O75027 752 aa12.54□□□□□ -0.4
GTF2H3-208ENST00000539994 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
GTF2H3-208ENST00000539994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
GTF2H3-208ENST00000539994 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
GTF2H3-208ENST00000539994 APLP2Q06481 763 aa12.41□□□□□ -0.42
GTF2H3-208ENST00000539994 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
GTF2H3-208ENST00000539994 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
GTF2H3-208ENST00000539994 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
GTF2H3-208ENST00000539994 POTEHQ6S545 545 aa12.3□□□□□ -0.44
GTF2H3-208ENST00000539994 ATF5Q9Y2D1 282 aaPredicted RBP12.23□□□□□ -0.45
GTF2H3-208ENST00000539994 POLA2Q14181 598 aa12.21□□□□□ -0.45
GTF2H3-208ENST00000539994 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
GTF2H3-208ENST00000539994 ZBTB22O15209 634 aa12.16□□□□□ -0.46
GTF2H3-208ENST00000539994 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
GTF2H3-208ENST00000539994 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
GTF2H3-208ENST00000539994 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
GTF2H3-208ENST00000539994 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
GTF2H3-208ENST00000539994 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
GTF2H3-208ENST00000539994 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
GTF2H3-208ENST00000539994 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
GTF2H3-208ENST00000539994 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
GTF2H3-208ENST00000539994 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
GTF2H3-208ENST00000539994 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
GTF2H3-208ENST00000539994 FXR2P51116 673 aaKnown RBP eCLIP11.55□□□□□ -0.56
GTF2H3-208ENST00000539994 FBLN2P98095 1184 aa11.54□□□□□ -0.56
GTF2H3-208ENST00000539994 SPDYE2BA6NHP3 402 aa11.53□□□□□ -0.56
GTF2H3-208ENST00000539994 SPDYE6P0CI01 402 aa11.53□□□□□ -0.56
GTF2H3-208ENST00000539994 SPDYE2Q495Y8 402 aa11.53□□□□□ -0.56
GTF2H3-208ENST00000539994 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
GTF2H3-208ENST00000539994 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
GTF2H3-208ENST00000539994 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
GTF2H3-208ENST00000539994 EVX2Q03828 476 aa11.4□□□□□ -0.58
GTF2H3-208ENST00000539994 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
GTF2H3-208ENST00000539994 HAX1O00165 279 aa11.38□□□□□ -0.59
GTF2H3-208ENST00000539994 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
GTF2H3-208ENST00000539994 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
GTF2H3-208ENST00000539994 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
GTF2H3-208ENST00000539994 CHADLQ6NUI6 762 aa11.25□□□□□ -0.61
GTF2H3-208ENST00000539994 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
GTF2H3-208ENST00000539994 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
GTF2H3-208ENST00000539994 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
GTF2H3-208ENST00000539994 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
GTF2H3-208ENST00000539994 GABBR2O75899 941 aa11.04□□□□□ -0.64
GTF2H3-208ENST00000539994 FARP1Q9Y4F1 1045 aaPredicted RBP10.99□□□□□ -0.65
GTF2H3-208ENST00000539994 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
GTF2H3-208ENST00000539994 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
GTF2H3-208ENST00000539994 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
GTF2H3-208ENST00000539994 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
GTF2H3-208ENST00000539994 STAG3Q9UJ98 1225 aa10.82□□□□□ -0.68
GTF2H3-208ENST00000539994 MNX1P50219 401 aaPredicted RBP10.77□□□□□ -0.69
GTF2H3-208ENST00000539994 LHX8Q68G74 356 aa10.77□□□□□ -0.69
GTF2H3-208ENST00000539994 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
GTF2H3-208ENST00000539994 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.69
GTF2H3-208ENST00000539994 PROM2Q8N271 834 aa10.73□□□□□ -0.69
GTF2H3-208ENST00000539994 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
GTF2H3-208ENST00000539994 PHF12Q96QT6 1004 aa10.68□□□□□ -0.7
GTF2H3-208ENST00000539994 CLCN6P51797 869 aa10.65□□□□□ -0.7
GTF2H3-208ENST00000539994 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
GTF2H3-208ENST00000539994 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
GTF2H3-208ENST00000539994 PAK3O75914 559 aaPredicted RBP10.55□□□□□ -0.72
GTF2H3-208ENST00000539994 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
GTF2H3-208ENST00000539994 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
GTF2H3-208ENST00000539994 MS4A3Q96HJ5 214 aa10.53□□□□□ -0.72
GTF2H3-208ENST00000539994 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
GTF2H3-208ENST00000539994 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
GTF2H3-208ENST00000539994 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
GTF2H3-208ENST00000539994 ATMINO43313 823 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms