RNA–Protein interactions for RNA: ENST00000539744.5

LMNTD1-207, Transcript of lamin tail domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMNTD1, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-207ENST00000539744 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
LMNTD1-207ENST00000539744 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
LMNTD1-207ENST00000539744 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
LMNTD1-207ENST00000539744 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
LMNTD1-207ENST00000539744 FOXD1Q16676 465 aa19.63■□□□□ 0.73
LMNTD1-207ENST00000539744 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
LMNTD1-207ENST00000539744 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
LMNTD1-207ENST00000539744 MSH5O43196 834 aa18.3■□□□□ 0.52
LMNTD1-207ENST00000539744 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
LMNTD1-207ENST00000539744 ADRA2BP18089 450 aa18.22■□□□□ 0.51
LMNTD1-207ENST00000539744 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
LMNTD1-207ENST00000539744 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
LMNTD1-207ENST00000539744 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
LMNTD1-207ENST00000539744 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.23
LMNTD1-207ENST00000539744 PPP4R3CPQ6ZMV5 832 aa16.22■□□□□ 0.19
LMNTD1-207ENST00000539744 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
LMNTD1-207ENST00000539744 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
LMNTD1-207ENST00000539744 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
LMNTD1-207ENST00000539744 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
LMNTD1-207ENST00000539744 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
LMNTD1-207ENST00000539744 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
LMNTD1-207ENST00000539744 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
LMNTD1-207ENST00000539744 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
LMNTD1-207ENST00000539744 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
LMNTD1-207ENST00000539744 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
LMNTD1-207ENST00000539744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
LMNTD1-207ENST00000539744 KCNA4P22459 653 aa14.97□□□□□ -0.01
LMNTD1-207ENST00000539744 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
LMNTD1-207ENST00000539744 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
LMNTD1-207ENST00000539744 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
LMNTD1-207ENST00000539744 CAPN15O75808 1086 aa14.66□□□□□ -0.06
LMNTD1-207ENST00000539744 DSG3P32926 999 aa14.66□□□□□ -0.06
LMNTD1-207ENST00000539744 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
LMNTD1-207ENST00000539744 ABCB7O75027 752 aa14.36□□□□□ -0.11
LMNTD1-207ENST00000539744 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
LMNTD1-207ENST00000539744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
LMNTD1-207ENST00000539744 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
LMNTD1-207ENST00000539744 APLP2Q06481 763 aa14.3□□□□□ -0.12
LMNTD1-207ENST00000539744 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
LMNTD1-207ENST00000539744 POTEHQ6S545 545 aa14.19□□□□□ -0.14
LMNTD1-207ENST00000539744 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
LMNTD1-207ENST00000539744 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
LMNTD1-207ENST00000539744 POLA2Q14181 598 aa14.02□□□□□ -0.16
LMNTD1-207ENST00000539744 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
LMNTD1-207ENST00000539744 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
LMNTD1-207ENST00000539744 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
LMNTD1-207ENST00000539744 ZBTB22O15209 634 aa13.81□□□□□ -0.2
LMNTD1-207ENST00000539744 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
LMNTD1-207ENST00000539744 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
LMNTD1-207ENST00000539744 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
LMNTD1-207ENST00000539744 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
LMNTD1-207ENST00000539744 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
LMNTD1-207ENST00000539744 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
LMNTD1-207ENST00000539744 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
LMNTD1-207ENST00000539744 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
LMNTD1-207ENST00000539744 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
LMNTD1-207ENST00000539744 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
LMNTD1-207ENST00000539744 FBLN2P98095 1184 aa13.25□□□□□ -0.29
LMNTD1-207ENST00000539744 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
LMNTD1-207ENST00000539744 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
LMNTD1-207ENST00000539744 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
LMNTD1-207ENST00000539744 SP7Q8TDD2 431 aaPredicted RBP13.23□□□□□ -0.29
LMNTD1-207ENST00000539744 HAX1O00165 279 aa13.13□□□□□ -0.31
LMNTD1-207ENST00000539744 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
LMNTD1-207ENST00000539744 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
LMNTD1-207ENST00000539744 EVX2Q03828 476 aa13.08□□□□□ -0.32
LMNTD1-207ENST00000539744 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
LMNTD1-207ENST00000539744 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
LMNTD1-207ENST00000539744 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.32
LMNTD1-207ENST00000539744 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
LMNTD1-207ENST00000539744 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
LMNTD1-207ENST00000539744 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
LMNTD1-207ENST00000539744 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
LMNTD1-207ENST00000539744 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
LMNTD1-207ENST00000539744 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
LMNTD1-207ENST00000539744 GABBR2O75899 941 aa12.7□□□□□ -0.38
LMNTD1-207ENST00000539744 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
LMNTD1-207ENST00000539744 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
LMNTD1-207ENST00000539744 NISCHQ9Y2I1 1504 aa12.54□□□□□ -0.4
LMNTD1-207ENST00000539744 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
LMNTD1-207ENST00000539744 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
LMNTD1-207ENST00000539744 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
LMNTD1-207ENST00000539744 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
LMNTD1-207ENST00000539744 LHX8Q68G74 356 aa12.42□□□□□ -0.42
LMNTD1-207ENST00000539744 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
LMNTD1-207ENST00000539744 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
LMNTD1-207ENST00000539744 CLCN6P51797 869 aa12.32□□□□□ -0.44
LMNTD1-207ENST00000539744 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
LMNTD1-207ENST00000539744 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
LMNTD1-207ENST00000539744 DCBLD2Q96PD2 775 aa12.26□□□□□ -0.45
LMNTD1-207ENST00000539744 PROM2Q8N271 834 aa12.23□□□□□ -0.45
LMNTD1-207ENST00000539744 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
LMNTD1-207ENST00000539744 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
LMNTD1-207ENST00000539744 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
LMNTD1-207ENST00000539744 POTEB2H3BUK9 544 aa12.08□□□□□ -0.47
LMNTD1-207ENST00000539744 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.47
LMNTD1-207ENST00000539744 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
LMNTD1-207ENST00000539744 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
LMNTD1-207ENST00000539744 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
LMNTD1-207ENST00000539744 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms