RNA–Protein interactions for RNA: ENST00000538501.5

PPME1-204, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 744 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-204ENST00000538501 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
PPME1-204ENST00000538501 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
PPME1-204ENST00000538501 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
PPME1-204ENST00000538501 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
PPME1-204ENST00000538501 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
PPME1-204ENST00000538501 FOXD1Q16676 465 aa20.71■□□□□ 0.91
PPME1-204ENST00000538501 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
PPME1-204ENST00000538501 ADRA2BP18089 450 aa20.08■□□□□ 0.81
PPME1-204ENST00000538501 PIAS4Q8N2W9 510 aaPredicted RBP19.63■□□□□ 0.73
PPME1-204ENST00000538501 MSH5O43196 834 aa19.14■□□□□ 0.65
PPME1-204ENST00000538501 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
PPME1-204ENST00000538501 KCNA4P22459 653 aa18.68■□□□□ 0.58
PPME1-204ENST00000538501 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
PPME1-204ENST00000538501 NCBP3Q53F19 620 aaKnown RBP18.54■□□□□ 0.56
PPME1-204ENST00000538501 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
PPME1-204ENST00000538501 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
PPME1-204ENST00000538501 MAPK8IP2Q13387 824 aaPredicted RBP18.09■□□□□ 0.49
PPME1-204ENST00000538501 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
PPME1-204ENST00000538501 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
PPME1-204ENST00000538501 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
PPME1-204ENST00000538501 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
PPME1-204ENST00000538501 HOXD11P31277 338 aaPredicted RBP17.74■□□□□ 0.43
PPME1-204ENST00000538501 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
PPME1-204ENST00000538501 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
PPME1-204ENST00000538501 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
PPME1-204ENST00000538501 ZBTB22O15209 634 aa17.17■□□□□ 0.34
PPME1-204ENST00000538501 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
PPME1-204ENST00000538501 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
PPME1-204ENST00000538501 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
PPME1-204ENST00000538501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.281e-9■■■■□ 19.6
PPME1-204ENST00000538501 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
PPME1-204ENST00000538501 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
PPME1-204ENST00000538501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
PPME1-204ENST00000538501 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
PPME1-204ENST00000538501 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
PPME1-204ENST00000538501 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
PPME1-204ENST00000538501 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
PPME1-204ENST00000538501 APLP2Q06481 763 aa16.45■□□□□ 0.22
PPME1-204ENST00000538501 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
PPME1-204ENST00000538501 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
PPME1-204ENST00000538501 ATF5Q9Y2D1 282 aaPredicted RBP16.2■□□□□ 0.18
PPME1-204ENST00000538501 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
PPME1-204ENST00000538501 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
PPME1-204ENST00000538501 CAPN15O75808 1086 aa15.93■□□□□ 0.14
PPME1-204ENST00000538501 TRHP20396 242 aaPredicted RBP15.89■□□□□ 0.13
PPME1-204ENST00000538501 POLA2Q14181 598 aa15.75■□□□□ 0.11
PPME1-204ENST00000538501 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
PPME1-204ENST00000538501 FBLN2P98095 1184 aa15.67■□□□□ 0.1
PPME1-204ENST00000538501 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
PPME1-204ENST00000538501 FKBP8Q14318 412 aa15.65■□□□□ 0.1
PPME1-204ENST00000538501 DSG3P32926 999 aa15.64■□□□□ 0.09
PPME1-204ENST00000538501 ABCB7O75027 752 aa15.58■□□□□ 0.08
PPME1-204ENST00000538501 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
PPME1-204ENST00000538501 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
PPME1-204ENST00000538501 PROM2Q8N271 834 aa15.3■□□□□ 0.04
PPME1-204ENST00000538501 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
PPME1-204ENST00000538501 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
PPME1-204ENST00000538501 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
PPME1-204ENST00000538501 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
PPME1-204ENST00000538501 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
PPME1-204ENST00000538501 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
PPME1-204ENST00000538501 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
PPME1-204ENST00000538501 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
PPME1-204ENST00000538501 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
PPME1-204ENST00000538501 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
PPME1-204ENST00000538501 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
PPME1-204ENST00000538501 VASPP50552 380 aaPredicted RBP14.88□□□□□ -0.03
PPME1-204ENST00000538501 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
PPME1-204ENST00000538501 RTN4Q9NQC3 1192 aaKnown RBP14.73□□□□□ -0.05
PPME1-204ENST00000538501 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
PPME1-204ENST00000538501 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
PPME1-204ENST00000538501 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
PPME1-204ENST00000538501 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
PPME1-204ENST00000538501 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
PPME1-204ENST00000538501 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
PPME1-204ENST00000538501 MIER1Q8N108 512 aa14.55□□□□□ -0.08
PPME1-204ENST00000538501 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
PPME1-204ENST00000538501 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
PPME1-204ENST00000538501 SPOCK2Q92563 424 aa14.49□□□□□ -0.09
PPME1-204ENST00000538501 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
PPME1-204ENST00000538501 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
PPME1-204ENST00000538501 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
PPME1-204ENST00000538501 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
PPME1-204ENST00000538501 PKD2Q13563 968 aa14.27□□□□□ -0.13
PPME1-204ENST00000538501 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
PPME1-204ENST00000538501 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
PPME1-204ENST00000538501 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
PPME1-204ENST00000538501 GSE1Q14687 1217 aa14.19□□□□□ -0.14
PPME1-204ENST00000538501 NUBP1P53384 320 aa14.18□□□□□ -0.14
PPME1-204ENST00000538501 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.149e-8■■■□□ 18.9
PPME1-204ENST00000538501 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
PPME1-204ENST00000538501 ECM2O94769 699 aaPredicted RBP14.14□□□□□ -0.15
PPME1-204ENST00000538501 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
PPME1-204ENST00000538501 CIZ1Q9ULV3 898 aaPredicted RBP14.12□□□□□ -0.15
PPME1-204ENST00000538501 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
PPME1-204ENST00000538501 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
PPME1-204ENST00000538501 ABCC9O60706 1549 aa14.06□□□□□ -0.16
PPME1-204ENST00000538501 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
PPME1-204ENST00000538501 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
PPME1-204ENST00000538501 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms