RNA–Protein interactions for RNA: ENST00000537323.5

PABPC1L-217, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 1 (best) BASIC

Gene PABPC1L, Length 1,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-217ENST00000537323 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
PABPC1L-217ENST00000537323 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.79
PABPC1L-217ENST00000537323 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
PABPC1L-217ENST00000537323 SHROOM4Q9ULL8 1493 aa31.76■■■□□ 2.68
PABPC1L-217ENST00000537323 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
PABPC1L-217ENST00000537323 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
PABPC1L-217ENST00000537323 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
PABPC1L-217ENST00000537323 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
PABPC1L-217ENST00000537323 CHIC1Q5VXU3 224 aa30.28■■■□□ 2.44
PABPC1L-217ENST00000537323 ABCC9O60706 1549 aa30.19■■■□□ 2.42
PABPC1L-217ENST00000537323 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
PABPC1L-217ENST00000537323 NACADO15069 1562 aa30.02■■■□□ 2.4
PABPC1L-217ENST00000537323 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
PABPC1L-217ENST00000537323 RB1CC1Q8TDY2 1594 aa29.57■■■□□ 2.32
PABPC1L-217ENST00000537323 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
PABPC1L-217ENST00000537323 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
PABPC1L-217ENST00000537323 LOC105371045A0A1W2PR82 267 aa29.2■■■□□ 2.27
PABPC1L-217ENST00000537323 WIZO95785 1651 aa29.19■■■□□ 2.26
PABPC1L-217ENST00000537323 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
PABPC1L-217ENST00000537323 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
PABPC1L-217ENST00000537323 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
PABPC1L-217ENST00000537323 HRCP23327 699 aa29.02■■■□□ 2.24
PABPC1L-217ENST00000537323 PCGF6Q9BYE7 350 aa29■■■□□ 2.23
PABPC1L-217ENST00000537323 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
PABPC1L-217ENST00000537323 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
PABPC1L-217ENST00000537323 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
PABPC1L-217ENST00000537323 TRIM26Q12899 539 aaPredicted RBP28.69■■■□□ 2.18
PABPC1L-217ENST00000537323 FAM9AQ8IZU1 332 aaPredicted RBP28.67■■■□□ 2.18
PABPC1L-217ENST00000537323 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PABPC1L-217ENST00000537323 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
PABPC1L-217ENST00000537323 CCDC88BA6NC98 1476 aa28.6■■■□□ 2.17
PABPC1L-217ENST00000537323 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
PABPC1L-217ENST00000537323 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.142e-8■■□□□ 11.6
PABPC1L-217ENST00000537323 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
PABPC1L-217ENST00000537323 EHMT2Q96KQ7 1210 aa28.27■■■□□ 2.12
PABPC1L-217ENST00000537323 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
PABPC1L-217ENST00000537323 EEA1Q15075 1411 aa28.16■■■□□ 2.1
PABPC1L-217ENST00000537323 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
PABPC1L-217ENST00000537323 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
PABPC1L-217ENST00000537323 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
PABPC1L-217ENST00000537323 SOGA1O94964 1423 aa28.05■■■□□ 2.08
PABPC1L-217ENST00000537323 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
PABPC1L-217ENST00000537323 TNIKQ9UKE5 1360 aa27.96■■■□□ 2.07
PABPC1L-217ENST00000537323 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
PABPC1L-217ENST00000537323 CEP162Q5TB80 1403 aa27.91■■■□□ 2.06
PABPC1L-217ENST00000537323 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
PABPC1L-217ENST00000537323 SYNJ1O43426 1573 aa27.89■■■□□ 2.06
PABPC1L-217ENST00000537323 GOLGA3Q08378 1498 aa27.85■■■□□ 2.05
PABPC1L-217ENST00000537323 KIF21BO75037 1637 aa27.77■■■□□ 2.04
PABPC1L-217ENST00000537323 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
PABPC1L-217ENST00000537323 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
PABPC1L-217ENST00000537323 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
PABPC1L-217ENST00000537323 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
PABPC1L-217ENST00000537323 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
PABPC1L-217ENST00000537323 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
PABPC1L-217ENST00000537323 CLIP1P30622 1438 aa27.46■■□□□ 1.99
PABPC1L-217ENST00000537323 RAPGEF2Q9Y4G8 1499 aa27.42■■□□□ 1.98
PABPC1L-217ENST00000537323 CCER1Q8TC90 406 aaPredicted RBP27.41■■□□□ 1.98
PABPC1L-217ENST00000537323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.4■■□□□ 1.98
PABPC1L-217ENST00000537323 CFTRP13569 1480 aa27.39■■□□□ 1.98
PABPC1L-217ENST00000537323 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
PABPC1L-217ENST00000537323 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
PABPC1L-217ENST00000537323 CUX1P39880 1505 aa27.36■■□□□ 1.97
PABPC1L-217ENST00000537323 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
PABPC1L-217ENST00000537323 TTBK1Q5TCY1 1321 aaPredicted RBP27.35■■□□□ 1.97
PABPC1L-217ENST00000537323 PRXQ9BXM0 1461 aa27.29■■□□□ 1.96
PABPC1L-217ENST00000537323 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
PABPC1L-217ENST00000537323 APLP2Q06481 763 aa27.16■■□□□ 1.94
PABPC1L-217ENST00000537323 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
PABPC1L-217ENST00000537323 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
PABPC1L-217ENST00000537323 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
PABPC1L-217ENST00000537323 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
PABPC1L-217ENST00000537323 CUX2O14529 1486 aa26.93■■□□□ 1.9
PABPC1L-217ENST00000537323 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
PABPC1L-217ENST00000537323 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
PABPC1L-217ENST00000537323 IGF1RP08069 1367 aa26.86■■□□□ 1.89
PABPC1L-217ENST00000537323 ARHGAP35Q9NRY4 1499 aa26.85■■□□□ 1.89
PABPC1L-217ENST00000537323 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
PABPC1L-217ENST00000537323 DIEXFQ68CQ4 756 aaKnown RBP26.78■■□□□ 1.88
PABPC1L-217ENST00000537323 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
PABPC1L-217ENST00000537323 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
PABPC1L-217ENST00000537323 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
PABPC1L-217ENST00000537323 RRBP1Q9P2E9 1410 aaKnown RBP26.71■■□□□ 1.87
PABPC1L-217ENST00000537323 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
PABPC1L-217ENST00000537323 MAP3K1Q13233 1512 aa26.67■■□□□ 1.86
PABPC1L-217ENST00000537323 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
PABPC1L-217ENST00000537323 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
PABPC1L-217ENST00000537323 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
PABPC1L-217ENST00000537323 LAMC3Q9Y6N6 1575 aa26.6■■□□□ 1.85
PABPC1L-217ENST00000537323 TIAM1Q13009 1591 aa26.59■■□□□ 1.85
PABPC1L-217ENST00000537323 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
PABPC1L-217ENST00000537323 CUL7Q14999 1698 aa26.57■■□□□ 1.84
PABPC1L-217ENST00000537323 NESP48681 1621 aa26.57■■□□□ 1.84
PABPC1L-217ENST00000537323 CCNB3Q8WWL7 1395 aa26.56■■□□□ 1.84
PABPC1L-217ENST00000537323 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
PABPC1L-217ENST00000537323 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
PABPC1L-217ENST00000537323 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
PABPC1L-217ENST00000537323 DHX57Q6P158 1386 aaKnown RBP26.52■■□□□ 1.84
PABPC1L-217ENST00000537323 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
PABPC1L-217ENST00000537323 CFAP43Q8NDM7 1665 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms