RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
LINC02398-201ENST00000536666 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.78
LINC02398-201ENST00000536666 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
LINC02398-201ENST00000536666 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
LINC02398-201ENST00000536666 FOXD1Q16676 465 aa21.84■■□□□ 1.09
LINC02398-201ENST00000536666 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
LINC02398-201ENST00000536666 MSH5O43196 834 aa20.51■□□□□ 0.87
LINC02398-201ENST00000536666 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
LINC02398-201ENST00000536666 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
LINC02398-201ENST00000536666 ADRA2BP18089 450 aa20.44■□□□□ 0.86
LINC02398-201ENST00000536666 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
LINC02398-201ENST00000536666 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
LINC02398-201ENST00000536666 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
LINC02398-201ENST00000536666 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
LINC02398-201ENST00000536666 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
LINC02398-201ENST00000536666 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
LINC02398-201ENST00000536666 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
LINC02398-201ENST00000536666 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
LINC02398-201ENST00000536666 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
LINC02398-201ENST00000536666 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
LINC02398-201ENST00000536666 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
LINC02398-201ENST00000536666 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
LINC02398-201ENST00000536666 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
LINC02398-201ENST00000536666 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
LINC02398-201ENST00000536666 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
LINC02398-201ENST00000536666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC02398-201ENST00000536666 KCNA4P22459 653 aa17.18■□□□□ 0.34
LINC02398-201ENST00000536666 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
LINC02398-201ENST00000536666 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
LINC02398-201ENST00000536666 CAPN15O75808 1086 aa16.56■□□□□ 0.24
LINC02398-201ENST00000536666 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
LINC02398-201ENST00000536666 APLP2Q06481 763 aa16.46■□□□□ 0.23
LINC02398-201ENST00000536666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
LINC02398-201ENST00000536666 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
LINC02398-201ENST00000536666 DSG3P32926 999 aa16.36■□□□□ 0.21
LINC02398-201ENST00000536666 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
LINC02398-201ENST00000536666 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
LINC02398-201ENST00000536666 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
LINC02398-201ENST00000536666 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
LINC02398-201ENST00000536666 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
LINC02398-201ENST00000536666 ABCB7O75027 752 aa16.14■□□□□ 0.17
LINC02398-201ENST00000536666 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
LINC02398-201ENST00000536666 POLA2Q14181 598 aa15.87■□□□□ 0.13
LINC02398-201ENST00000536666 ZBTB22O15209 634 aa15.74■□□□□ 0.11
LINC02398-201ENST00000536666 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
LINC02398-201ENST00000536666 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
LINC02398-201ENST00000536666 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
LINC02398-201ENST00000536666 POTEHQ6S545 545 aa15.57■□□□□ 0.08
LINC02398-201ENST00000536666 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
LINC02398-201ENST00000536666 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
LINC02398-201ENST00000536666 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
LINC02398-201ENST00000536666 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
LINC02398-201ENST00000536666 FBLN2P98095 1184 aa15.26■□□□□ 0.03
LINC02398-201ENST00000536666 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
LINC02398-201ENST00000536666 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
LINC02398-201ENST00000536666 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
LINC02398-201ENST00000536666 SPDYE6P0CI01 402 aa15.07■□□□□ 0
LINC02398-201ENST00000536666 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
LINC02398-201ENST00000536666 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
LINC02398-201ENST00000536666 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
LINC02398-201ENST00000536666 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
LINC02398-201ENST00000536666 ZNF692Q9BU19 519 aaPredicted RBP14.94□□□□□ -0.02
LINC02398-201ENST00000536666 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
LINC02398-201ENST00000536666 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
LINC02398-201ENST00000536666 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
LINC02398-201ENST00000536666 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
LINC02398-201ENST00000536666 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
LINC02398-201ENST00000536666 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
LINC02398-201ENST00000536666 HAX1O00165 279 aa14.69□□□□□ -0.06
LINC02398-201ENST00000536666 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
LINC02398-201ENST00000536666 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
LINC02398-201ENST00000536666 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
LINC02398-201ENST00000536666 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
LINC02398-201ENST00000536666 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
LINC02398-201ENST00000536666 EVX2Q03828 476 aa14.38□□□□□ -0.11
LINC02398-201ENST00000536666 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
LINC02398-201ENST00000536666 C19orf67A6NJJ6 358 aa14.34□□□□□ -0.11
LINC02398-201ENST00000536666 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
LINC02398-201ENST00000536666 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
LINC02398-201ENST00000536666 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
LINC02398-201ENST00000536666 GABBR2O75899 941 aa14.13□□□□□ -0.15
LINC02398-201ENST00000536666 CLCN6P51797 869 aa14.01□□□□□ -0.17
LINC02398-201ENST00000536666 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
LINC02398-201ENST00000536666 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
LINC02398-201ENST00000536666 PROM2Q8N271 834 aa13.99□□□□□ -0.17
LINC02398-201ENST00000536666 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
LINC02398-201ENST00000536666 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
LINC02398-201ENST00000536666 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
LINC02398-201ENST00000536666 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
LINC02398-201ENST00000536666 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
LINC02398-201ENST00000536666 MIER1Q8N108 512 aa13.81□□□□□ -0.2
LINC02398-201ENST00000536666 FKBP8Q14318 412 aa13.79□□□□□ -0.2
LINC02398-201ENST00000536666 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
LINC02398-201ENST00000536666 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
LINC02398-201ENST00000536666 LHX8Q68G74 356 aa13.75□□□□□ -0.21
LINC02398-201ENST00000536666 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
LINC02398-201ENST00000536666 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
LINC02398-201ENST00000536666 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
LINC02398-201ENST00000536666 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
LINC02398-201ENST00000536666 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms