RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
LINC02398-201ENST00000536666 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.78
LINC02398-201ENST00000536666 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
LINC02398-201ENST00000536666 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
LINC02398-201ENST00000536666 FOXD1Q16676 465 aa21.84■■□□□ 1.09
LINC02398-201ENST00000536666 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
LINC02398-201ENST00000536666 MSH5O43196 834 aa20.51■□□□□ 0.87
LINC02398-201ENST00000536666 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
LINC02398-201ENST00000536666 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
LINC02398-201ENST00000536666 ADRA2BP18089 450 aa20.44■□□□□ 0.86
LINC02398-201ENST00000536666 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
LINC02398-201ENST00000536666 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
LINC02398-201ENST00000536666 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
LINC02398-201ENST00000536666 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
LINC02398-201ENST00000536666 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
LINC02398-201ENST00000536666 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
LINC02398-201ENST00000536666 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
LINC02398-201ENST00000536666 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
LINC02398-201ENST00000536666 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
LINC02398-201ENST00000536666 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
LINC02398-201ENST00000536666 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
LINC02398-201ENST00000536666 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
LINC02398-201ENST00000536666 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
LINC02398-201ENST00000536666 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
LINC02398-201ENST00000536666 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
LINC02398-201ENST00000536666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC02398-201ENST00000536666 KCNA4P22459 653 aa17.18■□□□□ 0.34
LINC02398-201ENST00000536666 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
LINC02398-201ENST00000536666 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
LINC02398-201ENST00000536666 CAPN15O75808 1086 aa16.56■□□□□ 0.24
LINC02398-201ENST00000536666 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
LINC02398-201ENST00000536666 APLP2Q06481 763 aa16.46■□□□□ 0.23
LINC02398-201ENST00000536666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
LINC02398-201ENST00000536666 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
LINC02398-201ENST00000536666 DSG3P32926 999 aa16.36■□□□□ 0.21
LINC02398-201ENST00000536666 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
LINC02398-201ENST00000536666 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
LINC02398-201ENST00000536666 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
LINC02398-201ENST00000536666 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
LINC02398-201ENST00000536666 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
LINC02398-201ENST00000536666 ABCB7O75027 752 aa16.14■□□□□ 0.17
LINC02398-201ENST00000536666 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
LINC02398-201ENST00000536666 POLA2Q14181 598 aa15.87■□□□□ 0.13
LINC02398-201ENST00000536666 ZBTB22O15209 634 aa15.74■□□□□ 0.11
LINC02398-201ENST00000536666 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
LINC02398-201ENST00000536666 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
LINC02398-201ENST00000536666 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
LINC02398-201ENST00000536666 POTEHQ6S545 545 aa15.57■□□□□ 0.08
LINC02398-201ENST00000536666 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
LINC02398-201ENST00000536666 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
LINC02398-201ENST00000536666 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
LINC02398-201ENST00000536666 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
LINC02398-201ENST00000536666 FBLN2P98095 1184 aa15.26■□□□□ 0.03
LINC02398-201ENST00000536666 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
LINC02398-201ENST00000536666 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
LINC02398-201ENST00000536666 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
LINC02398-201ENST00000536666 SPDYE6P0CI01 402 aa15.07■□□□□ 0
LINC02398-201ENST00000536666 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
LINC02398-201ENST00000536666 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
LINC02398-201ENST00000536666 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
LINC02398-201ENST00000536666 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
LINC02398-201ENST00000536666 ZNF692Q9BU19 519 aaPredicted RBP14.94□□□□□ -0.02
LINC02398-201ENST00000536666 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
LINC02398-201ENST00000536666 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
LINC02398-201ENST00000536666 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
LINC02398-201ENST00000536666 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
LINC02398-201ENST00000536666 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
LINC02398-201ENST00000536666 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
LINC02398-201ENST00000536666 HAX1O00165 279 aa14.69□□□□□ -0.06
LINC02398-201ENST00000536666 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
LINC02398-201ENST00000536666 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
LINC02398-201ENST00000536666 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
LINC02398-201ENST00000536666 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
LINC02398-201ENST00000536666 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
LINC02398-201ENST00000536666 EVX2Q03828 476 aa14.38□□□□□ -0.11
LINC02398-201ENST00000536666 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
LINC02398-201ENST00000536666 C19orf67A6NJJ6 358 aa14.34□□□□□ -0.11
LINC02398-201ENST00000536666 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
LINC02398-201ENST00000536666 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
LINC02398-201ENST00000536666 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
LINC02398-201ENST00000536666 GABBR2O75899 941 aa14.13□□□□□ -0.15
LINC02398-201ENST00000536666 CLCN6P51797 869 aa14.01□□□□□ -0.17
LINC02398-201ENST00000536666 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
LINC02398-201ENST00000536666 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
LINC02398-201ENST00000536666 PROM2Q8N271 834 aa13.99□□□□□ -0.17
LINC02398-201ENST00000536666 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
LINC02398-201ENST00000536666 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
LINC02398-201ENST00000536666 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
LINC02398-201ENST00000536666 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
LINC02398-201ENST00000536666 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
LINC02398-201ENST00000536666 MIER1Q8N108 512 aa13.81□□□□□ -0.2
LINC02398-201ENST00000536666 FKBP8Q14318 412 aa13.79□□□□□ -0.2
LINC02398-201ENST00000536666 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
LINC02398-201ENST00000536666 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
LINC02398-201ENST00000536666 LHX8Q68G74 356 aa13.75□□□□□ -0.21
LINC02398-201ENST00000536666 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
LINC02398-201ENST00000536666 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
LINC02398-201ENST00000536666 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
LINC02398-201ENST00000536666 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
LINC02398-201ENST00000536666 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms