RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
KNTC1-209ENST00000536625 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
KNTC1-209ENST00000536625 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
KNTC1-209ENST00000536625 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
KNTC1-209ENST00000536625 FOXD1Q16676 465 aa22.8■■□□□ 1.24
KNTC1-209ENST00000536625 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
KNTC1-209ENST00000536625 MSH5O43196 834 aa21.34■■□□□ 1.01
KNTC1-209ENST00000536625 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
KNTC1-209ENST00000536625 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
KNTC1-209ENST00000536625 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
KNTC1-209ENST00000536625 ADRA2BP18089 450 aa21.02■□□□□ 0.96
KNTC1-209ENST00000536625 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
KNTC1-209ENST00000536625 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
KNTC1-209ENST00000536625 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
KNTC1-209ENST00000536625 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
KNTC1-209ENST00000536625 CACNB1Q02641 598 aaPredicted RBP18.52■□□□□ 0.56
KNTC1-209ENST00000536625 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
KNTC1-209ENST00000536625 HOXD11P31277 338 aaPredicted RBP18.44■□□□□ 0.54
KNTC1-209ENST00000536625 CNKSR2Q8WXI2 1034 aa18.29■□□□□ 0.52
KNTC1-209ENST00000536625 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
KNTC1-209ENST00000536625 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
KNTC1-209ENST00000536625 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
KNTC1-209ENST00000536625 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
KNTC1-209ENST00000536625 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
KNTC1-209ENST00000536625 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
KNTC1-209ENST00000536625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
KNTC1-209ENST00000536625 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
KNTC1-209ENST00000536625 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
KNTC1-209ENST00000536625 KCNA4P22459 653 aa17■□□□□ 0.31
KNTC1-209ENST00000536625 DSG3P32926 999 aa16.99■□□□□ 0.31
KNTC1-209ENST00000536625 CAPN15O75808 1086 aa16.98■□□□□ 0.31
KNTC1-209ENST00000536625 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
KNTC1-209ENST00000536625 POTEHQ6S545 545 aa16.71■□□□□ 0.27
KNTC1-209ENST00000536625 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
KNTC1-209ENST00000536625 ABCB7O75027 752 aa16.63■□□□□ 0.25
KNTC1-209ENST00000536625 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
KNTC1-209ENST00000536625 APLP2Q06481 763 aa16.51■□□□□ 0.23
KNTC1-209ENST00000536625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
KNTC1-209ENST00000536625 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
KNTC1-209ENST00000536625 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
KNTC1-209ENST00000536625 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
KNTC1-209ENST00000536625 POLA2Q14181 598 aa16.15■□□□□ 0.18
KNTC1-209ENST00000536625 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
KNTC1-209ENST00000536625 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
KNTC1-209ENST00000536625 CHRDL2Q6WN34 429 aa15.96■□□□□ 0.15
KNTC1-209ENST00000536625 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
KNTC1-209ENST00000536625 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
KNTC1-209ENST00000536625 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
KNTC1-209ENST00000536625 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
KNTC1-209ENST00000536625 ZBTB22O15209 634 aa15.67■□□□□ 0.1
KNTC1-209ENST00000536625 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
KNTC1-209ENST00000536625 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
KNTC1-209ENST00000536625 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
KNTC1-209ENST00000536625 SP7Q8TDD2 431 aaPredicted RBP15.51■□□□□ 0.07
KNTC1-209ENST00000536625 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
KNTC1-209ENST00000536625 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
KNTC1-209ENST00000536625 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
KNTC1-209ENST00000536625 HAX1O00165 279 aa15.3■□□□□ 0.04
KNTC1-209ENST00000536625 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
KNTC1-209ENST00000536625 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
KNTC1-209ENST00000536625 SPDYE2Q495Y8 402 aa15.23■□□□□ 0.03
KNTC1-209ENST00000536625 FBLN2P98095 1184 aa15.21■□□□□ 0.03
KNTC1-209ENST00000536625 EVX2Q03828 476 aa15.21■□□□□ 0.03
KNTC1-209ENST00000536625 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
KNTC1-209ENST00000536625 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
KNTC1-209ENST00000536625 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
KNTC1-209ENST00000536625 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
KNTC1-209ENST00000536625 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
KNTC1-209ENST00000536625 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
KNTC1-209ENST00000536625 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
KNTC1-209ENST00000536625 CHADLQ6NUI6 762 aa14.87□□□□□ -0.03
KNTC1-209ENST00000536625 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
KNTC1-209ENST00000536625 GABBR2O75899 941 aa14.76□□□□□ -0.05
KNTC1-209ENST00000536625 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
KNTC1-209ENST00000536625 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
KNTC1-209ENST00000536625 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
KNTC1-209ENST00000536625 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
KNTC1-209ENST00000536625 LHX8Q68G74 356 aa14.55□□□□□ -0.08
KNTC1-209ENST00000536625 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
KNTC1-209ENST00000536625 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
KNTC1-209ENST00000536625 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
KNTC1-209ENST00000536625 ZRANB1Q9UGI0 708 aa14.3□□□□□ -0.12
KNTC1-209ENST00000536625 CLCN6P51797 869 aa14.29□□□□□ -0.12
KNTC1-209ENST00000536625 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
KNTC1-209ENST00000536625 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
KNTC1-209ENST00000536625 DCBLD2Q96PD2 775 aa14.25□□□□□ -0.13
KNTC1-209ENST00000536625 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
KNTC1-209ENST00000536625 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.13
KNTC1-209ENST00000536625 PHF12Q96QT6 1004 aa14.13□□□□□ -0.15
KNTC1-209ENST00000536625 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
KNTC1-209ENST00000536625 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
KNTC1-209ENST00000536625 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
KNTC1-209ENST00000536625 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
KNTC1-209ENST00000536625 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
KNTC1-209ENST00000536625 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
KNTC1-209ENST00000536625 MS4A3Q96HJ5 214 aa13.92□□□□□ -0.18
KNTC1-209ENST00000536625 PROM2Q8N271 834 aa13.89□□□□□ -0.19
KNTC1-209ENST00000536625 ASTLQ6HA08 431 aaPredicted RBP13.85□□□□□ -0.19
KNTC1-209ENST00000536625 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
KNTC1-209ENST00000536625 ATMINO43313 823 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms