RNA–Protein interactions for RNA: ENST00000536256.3

ABCC4-206, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2 BASIC

Gene ABCC4, Length 2,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-206ENST00000536256 NISCHQ9Y2I1 1504 aa27.54■■■□□ 2
ABCC4-206ENST00000536256 SHROOM4Q9ULL8 1493 aa23.59■■□□□ 1.37
ABCC4-206ENST00000536256 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
ABCC4-206ENST00000536256 ZCCHC6Q5VYS8 1495 aaKnown RBP23.27■■□□□ 1.32
ABCC4-206ENST00000536256 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.3
ABCC4-206ENST00000536256 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
ABCC4-206ENST00000536256 DCAF1Q9Y4B6 1507 aa22.53■■□□□ 1.2
ABCC4-206ENST00000536256 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
ABCC4-206ENST00000536256 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
ABCC4-206ENST00000536256 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
ABCC4-206ENST00000536256 ABCC9O60706 1549 aa21.94■■□□□ 1.1
ABCC4-206ENST00000536256 LOC105371045A0A1W2PR82 267 aa21.83■■□□□ 1.09
ABCC4-206ENST00000536256 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
ABCC4-206ENST00000536256 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
ABCC4-206ENST00000536256 HRCP23327 699 aa21.71■■□□□ 1.07
ABCC4-206ENST00000536256 NACADO15069 1562 aa21.63■■□□□ 1.05
ABCC4-206ENST00000536256 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
ABCC4-206ENST00000536256 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
ABCC4-206ENST00000536256 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
ABCC4-206ENST00000536256 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
ABCC4-206ENST00000536256 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
ABCC4-206ENST00000536256 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
ABCC4-206ENST00000536256 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1
ABCC4-206ENST00000536256 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
ABCC4-206ENST00000536256 WIZO95785 1651 aa21.32■■□□□ 1
ABCC4-206ENST00000536256 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.98
ABCC4-206ENST00000536256 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
ABCC4-206ENST00000536256 SMARCA4P51532 1647 aa20.97■□□□□ 0.95
ABCC4-206ENST00000536256 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
ABCC4-206ENST00000536256 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
ABCC4-206ENST00000536256 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
ABCC4-206ENST00000536256 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
ABCC4-206ENST00000536256 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
ABCC4-206ENST00000536256 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
ABCC4-206ENST00000536256 ZEB1P37275 1124 aaPredicted RBP20.82■□□□□ 0.92
ABCC4-206ENST00000536256 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
ABCC4-206ENST00000536256 SOGA1O94964 1423 aa20.67■□□□□ 0.9
ABCC4-206ENST00000536256 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
ABCC4-206ENST00000536256 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
ABCC4-206ENST00000536256 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
ABCC4-206ENST00000536256 CEP162Q5TB80 1403 aa20.55■□□□□ 0.88
ABCC4-206ENST00000536256 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
ABCC4-206ENST00000536256 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
ABCC4-206ENST00000536256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.53■□□□□ 0.88
ABCC4-206ENST00000536256 TNIKQ9UKE5 1360 aa20.51■□□□□ 0.87
ABCC4-206ENST00000536256 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
ABCC4-206ENST00000536256 EEA1Q15075 1411 aa20.5■□□□□ 0.87
ABCC4-206ENST00000536256 CCER1Q8TC90 406 aaPredicted RBP20.46■□□□□ 0.87
ABCC4-206ENST00000536256 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
ABCC4-206ENST00000536256 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
ABCC4-206ENST00000536256 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
ABCC4-206ENST00000536256 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
ABCC4-206ENST00000536256 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
ABCC4-206ENST00000536256 KIF21BO75037 1637 aa20.21■□□□□ 0.83
ABCC4-206ENST00000536256 RANGAP1P46060 587 aaPredicted RBP20.2■□□□□ 0.82
ABCC4-206ENST00000536256 CLIP1P30622 1438 aa20.18■□□□□ 0.82
ABCC4-206ENST00000536256 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
ABCC4-206ENST00000536256 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
ABCC4-206ENST00000536256 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.8
ABCC4-206ENST00000536256 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
ABCC4-206ENST00000536256 APLP2Q06481 763 aa20.06■□□□□ 0.8
ABCC4-206ENST00000536256 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
ABCC4-206ENST00000536256 DIEXFQ68CQ4 756 aaKnown RBP20.03■□□□□ 0.8
ABCC4-206ENST00000536256 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
ABCC4-206ENST00000536256 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
ABCC4-206ENST00000536256 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
ABCC4-206ENST00000536256 CUX1P39880 1505 aa19.94■□□□□ 0.78
ABCC4-206ENST00000536256 PRXQ9BXM0 1461 aa19.93■□□□□ 0.78
ABCC4-206ENST00000536256 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
ABCC4-206ENST00000536256 CFTRP13569 1480 aa19.89■□□□□ 0.77
ABCC4-206ENST00000536256 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
ABCC4-206ENST00000536256 KIF27Q86VH2 1401 aa19.86■□□□□ 0.77
ABCC4-206ENST00000536256 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
ABCC4-206ENST00000536256 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
ABCC4-206ENST00000536256 ACIN1Q9UKV3 1341 aaKnown RBP19.82■□□□□ 0.76
ABCC4-206ENST00000536256 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
ABCC4-206ENST00000536256 CENPBP07199 599 aaPredicted RBP19.72■□□□□ 0.75
ABCC4-206ENST00000536256 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
ABCC4-206ENST00000536256 CUX2O14529 1486 aa19.69■□□□□ 0.74
ABCC4-206ENST00000536256 ARHGAP35Q9NRY4 1499 aa19.67■□□□□ 0.74
ABCC4-206ENST00000536256 IGF1RP08069 1367 aa19.67■□□□□ 0.74
ABCC4-206ENST00000536256 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
ABCC4-206ENST00000536256 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
ABCC4-206ENST00000536256 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
ABCC4-206ENST00000536256 MIER1Q8N108 512 aa19.61■□□□□ 0.73
ABCC4-206ENST00000536256 YTHDC1Q96MU7 727 aaKnown RBP19.6■□□□□ 0.73
ABCC4-206ENST00000536256 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
ABCC4-206ENST00000536256 CARMIL1Q5VZK9 1371 aa19.59■□□□□ 0.73
ABCC4-206ENST00000536256 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
ABCC4-206ENST00000536256 ITGAEP38570 1179 aa19.57■□□□□ 0.72
ABCC4-206ENST00000536256 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
ABCC4-206ENST00000536256 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
ABCC4-206ENST00000536256 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
ABCC4-206ENST00000536256 FANCD2Q9BXW9 1451 aa19.5■□□□□ 0.71
ABCC4-206ENST00000536256 P3H3Q8IVL6 736 aa19.48■□□□□ 0.71
ABCC4-206ENST00000536256 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
ABCC4-206ENST00000536256 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
ABCC4-206ENST00000536256 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
ABCC4-206ENST00000536256 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
ABCC4-206ENST00000536256 NESP48681 1621 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms