RNA–Protein interactions for RNA: ENST00000536189.6

TIMP2-202, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 2 BASIC

Gene TIMP2, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-202ENST00000536189 NISCHQ9Y2I1 1504 aa20.75■□□□□ 0.91
TIMP2-202ENST00000536189 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.49
TIMP2-202ENST00000536189 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
TIMP2-202ENST00000536189 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
TIMP2-202ENST00000536189 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
TIMP2-202ENST00000536189 ABCC9O60706 1549 aa17.14■□□□□ 0.33
TIMP2-202ENST00000536189 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
TIMP2-202ENST00000536189 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
TIMP2-202ENST00000536189 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
TIMP2-202ENST00000536189 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
TIMP2-202ENST00000536189 NACADO15069 1562 aa16.63■□□□□ 0.25
TIMP2-202ENST00000536189 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
TIMP2-202ENST00000536189 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
TIMP2-202ENST00000536189 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
TIMP2-202ENST00000536189 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
TIMP2-202ENST00000536189 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
TIMP2-202ENST00000536189 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
TIMP2-202ENST00000536189 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
TIMP2-202ENST00000536189 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
TIMP2-202ENST00000536189 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
TIMP2-202ENST00000536189 WIZO95785 1651 aa15.97■□□□□ 0.15
TIMP2-202ENST00000536189 BAZ1AQ9NRL2 1556 aaPredicted RBP15.97■□□□□ 0.15
TIMP2-202ENST00000536189 FAM9AQ8IZU1 332 aaPredicted RBP15.88■□□□□ 0.13
TIMP2-202ENST00000536189 SMARCA4P51532 1647 aa15.87■□□□□ 0.13
TIMP2-202ENST00000536189 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
TIMP2-202ENST00000536189 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
TIMP2-202ENST00000536189 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.1
TIMP2-202ENST00000536189 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.1
TIMP2-202ENST00000536189 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
TIMP2-202ENST00000536189 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
TIMP2-202ENST00000536189 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
TIMP2-202ENST00000536189 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
TIMP2-202ENST00000536189 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
TIMP2-202ENST00000536189 PEG3Q9GZU2 1588 aa15.54■□□□□ 0.08
TIMP2-202ENST00000536189 RANGAP1P46060 587 aaPredicted RBP15.52■□□□□ 0.07
TIMP2-202ENST00000536189 ABCC8Q09428 1581 aa15.48■□□□□ 0.07
TIMP2-202ENST00000536189 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
TIMP2-202ENST00000536189 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
TIMP2-202ENST00000536189 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
TIMP2-202ENST00000536189 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
TIMP2-202ENST00000536189 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
TIMP2-202ENST00000536189 PPARGC1BQ86YN6 1023 aaKnown RBP15.28■□□□□ 0.04
TIMP2-202ENST00000536189 SOGA1O94964 1423 aa15.28■□□□□ 0.04
TIMP2-202ENST00000536189 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
TIMP2-202ENST00000536189 RUSC2Q8N2Y8 1516 aa15.22■□□□□ 0.03
TIMP2-202ENST00000536189 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
TIMP2-202ENST00000536189 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
TIMP2-202ENST00000536189 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
TIMP2-202ENST00000536189 PCGF6Q9BYE7 350 aa15.18■□□□□ 0.02
TIMP2-202ENST00000536189 CFTRP13569 1480 aa15.17■□□□□ 0.02
TIMP2-202ENST00000536189 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
TIMP2-202ENST00000536189 NESP48681 1621 aa15.07■□□□□ 0
TIMP2-202ENST00000536189 EEA1Q15075 1411 aa15.05■□□□□ -0
TIMP2-202ENST00000536189 CUX1P39880 1505 aa15.03■□□□□ -0
TIMP2-202ENST00000536189 TOP2BQ02880 1626 aa15.01□□□□□ -0.01
TIMP2-202ENST00000536189 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
TIMP2-202ENST00000536189 ATP1B4Q9UN42 357 aaPredicted RBP14.96□□□□□ -0.01
TIMP2-202ENST00000536189 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
TIMP2-202ENST00000536189 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
TIMP2-202ENST00000536189 TNIKQ9UKE5 1360 aa14.94□□□□□ -0.02
TIMP2-202ENST00000536189 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
TIMP2-202ENST00000536189 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
TIMP2-202ENST00000536189 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
TIMP2-202ENST00000536189 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
TIMP2-202ENST00000536189 RAPGEF2Q9Y4G8 1499 aa14.91□□□□□ -0.02
TIMP2-202ENST00000536189 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
TIMP2-202ENST00000536189 CUX2O14529 1486 aa14.89□□□□□ -0.03
TIMP2-202ENST00000536189 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
TIMP2-202ENST00000536189 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
TIMP2-202ENST00000536189 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
TIMP2-202ENST00000536189 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
TIMP2-202ENST00000536189 FBLN2P98095 1184 aa14.81□□□□□ -0.04
TIMP2-202ENST00000536189 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
TIMP2-202ENST00000536189 PRDM2Q13029 1718 aa14.81□□□□□ -0.04
TIMP2-202ENST00000536189 CLIP1P30622 1438 aa14.8□□□□□ -0.04
TIMP2-202ENST00000536189 IGF1RP08069 1367 aa14.79□□□□□ -0.04
TIMP2-202ENST00000536189 KIF21BO75037 1637 aa14.79□□□□□ -0.04
TIMP2-202ENST00000536189 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
TIMP2-202ENST00000536189 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
TIMP2-202ENST00000536189 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
TIMP2-202ENST00000536189 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.05
TIMP2-202ENST00000536189 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
TIMP2-202ENST00000536189 DNMBPQ6XZF7 1577 aa14.75□□□□□ -0.05
TIMP2-202ENST00000536189 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
TIMP2-202ENST00000536189 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
TIMP2-202ENST00000536189 APLP2Q06481 763 aa14.73□□□□□ -0.05
TIMP2-202ENST00000536189 HRCP23327 699 aa14.7□□□□□ -0.06
TIMP2-202ENST00000536189 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
TIMP2-202ENST00000536189 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
TIMP2-202ENST00000536189 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
TIMP2-202ENST00000536189 ERCC6Q03468 1493 aa14.65□□□□□ -0.06
TIMP2-202ENST00000536189 VPS8Q8N3P4 1428 aa14.62□□□□□ -0.07
TIMP2-202ENST00000536189 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
TIMP2-202ENST00000536189 MYT1Q01538 1121 aa14.61□□□□□ -0.07
TIMP2-202ENST00000536189 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
TIMP2-202ENST00000536189 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
TIMP2-202ENST00000536189 ITGAEP38570 1179 aa14.59□□□□□ -0.07
TIMP2-202ENST00000536189 AQRO60306 1485 aaKnown RBP eCLIP14.59□□□□□ -0.07
TIMP2-202ENST00000536189 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
TIMP2-202ENST00000536189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms