RNA–Protein interactions for RNA: ENST00000534675.1

LINC02235-201, Transcript of long intergenic non-protein coding RNA 2235, humanhuman

TSL 5 BASIC

Gene LINC02235, Length 466 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02235-201ENST00000534675 AEBP2Q6ZN18 517 aaPredicted RBP31.41■■■□□ 2.62
LINC02235-201ENST00000534675 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
LINC02235-201ENST00000534675 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
LINC02235-201ENST00000534675 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
LINC02235-201ENST00000534675 FOXD1Q16676 465 aa25.02■■□□□ 1.6
LINC02235-201ENST00000534675 PLPPR3Q6T4P5 718 aa23.47■■□□□ 1.35
LINC02235-201ENST00000534675 MSH5O43196 834 aa23.44■■□□□ 1.34
LINC02235-201ENST00000534675 POTEDQ86YR6 584 aa23.35■■□□□ 1.33
LINC02235-201ENST00000534675 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
LINC02235-201ENST00000534675 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
LINC02235-201ENST00000534675 ADRA2BP18089 450 aa23.15■■□□□ 1.3
LINC02235-201ENST00000534675 MAPK8IP2Q13387 824 aaPredicted RBP21.35■■□□□ 1.01
LINC02235-201ENST00000534675 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
LINC02235-201ENST00000534675 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
LINC02235-201ENST00000534675 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
LINC02235-201ENST00000534675 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
LINC02235-201ENST00000534675 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
LINC02235-201ENST00000534675 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
LINC02235-201ENST00000534675 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
LINC02235-201ENST00000534675 RNF216Q9NWF9 866 aaPredicted RBP20.09■□□□□ 0.81
LINC02235-201ENST00000534675 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
LINC02235-201ENST00000534675 C1QBPQ07021 282 aaKnown RBP19.67■□□□□ 0.74
LINC02235-201ENST00000534675 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
LINC02235-201ENST00000534675 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
LINC02235-201ENST00000534675 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
LINC02235-201ENST00000534675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
LINC02235-201ENST00000534675 U3KPZ7 1027 aaPredicted RBP18.95■□□□□ 0.62
LINC02235-201ENST00000534675 KCNA4P22459 653 aa18.87■□□□□ 0.61
LINC02235-201ENST00000534675 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
LINC02235-201ENST00000534675 CAPN15O75808 1086 aa18.74■□□□□ 0.59
LINC02235-201ENST00000534675 DSG3P32926 999 aa18.67■□□□□ 0.58
LINC02235-201ENST00000534675 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
LINC02235-201ENST00000534675 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
LINC02235-201ENST00000534675 ABCB7O75027 752 aa18.32■□□□□ 0.52
LINC02235-201ENST00000534675 APLP2Q06481 763 aa18.31■□□□□ 0.52
LINC02235-201ENST00000534675 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
LINC02235-201ENST00000534675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
LINC02235-201ENST00000534675 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
LINC02235-201ENST00000534675 POTEHQ6S545 545 aa18.24■□□□□ 0.51
LINC02235-201ENST00000534675 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
LINC02235-201ENST00000534675 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
LINC02235-201ENST00000534675 POLA2Q14181 598 aa17.82■□□□□ 0.44
LINC02235-201ENST00000534675 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
LINC02235-201ENST00000534675 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
LINC02235-201ENST00000534675 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
LINC02235-201ENST00000534675 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
LINC02235-201ENST00000534675 CHRDL2Q6WN34 429 aa17.52■□□□□ 0.4
LINC02235-201ENST00000534675 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
LINC02235-201ENST00000534675 ZBTB22O15209 634 aa17.36■□□□□ 0.37
LINC02235-201ENST00000534675 AKT1S1Q96B36 256 aa17.33■□□□□ 0.36
LINC02235-201ENST00000534675 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
LINC02235-201ENST00000534675 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
LINC02235-201ENST00000534675 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
LINC02235-201ENST00000534675 PIP4P2Q8N4L2 257 aa17.07■□□□□ 0.32
LINC02235-201ENST00000534675 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
LINC02235-201ENST00000534675 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
LINC02235-201ENST00000534675 FXR2P51116 673 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC02235-201ENST00000534675 FBLN2P98095 1184 aa16.89■□□□□ 0.29
LINC02235-201ENST00000534675 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
LINC02235-201ENST00000534675 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
LINC02235-201ENST00000534675 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
LINC02235-201ENST00000534675 HAX1O00165 279 aa16.84■□□□□ 0.29
LINC02235-201ENST00000534675 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
LINC02235-201ENST00000534675 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
LINC02235-201ENST00000534675 EVX2Q03828 476 aa16.64■□□□□ 0.25
LINC02235-201ENST00000534675 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
LINC02235-201ENST00000534675 SPDYE1Q8NFV5 336 aaPredicted RBP16.62■□□□□ 0.25
LINC02235-201ENST00000534675 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
LINC02235-201ENST00000534675 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
LINC02235-201ENST00000534675 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC02235-201ENST00000534675 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
LINC02235-201ENST00000534675 C19orf67A6NJJ6 358 aa16.38■□□□□ 0.21
LINC02235-201ENST00000534675 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
LINC02235-201ENST00000534675 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
LINC02235-201ENST00000534675 GABBR2O75899 941 aa16.22■□□□□ 0.19
LINC02235-201ENST00000534675 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
LINC02235-201ENST00000534675 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
LINC02235-201ENST00000534675 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
LINC02235-201ENST00000534675 LHX8Q68G74 356 aa15.94■□□□□ 0.14
LINC02235-201ENST00000534675 POTEIP0CG38 1075 aa15.89■□□□□ 0.13
LINC02235-201ENST00000534675 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
LINC02235-201ENST00000534675 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
LINC02235-201ENST00000534675 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
LINC02235-201ENST00000534675 ZRANB1Q9UGI0 708 aa15.79■□□□□ 0.12
LINC02235-201ENST00000534675 CLCN6P51797 869 aa15.77■□□□□ 0.12
LINC02235-201ENST00000534675 ZNF579Q8NAF0 562 aaKnown RBP15.76■□□□□ 0.11
LINC02235-201ENST00000534675 DCBLD2Q96PD2 775 aa15.72■□□□□ 0.11
LINC02235-201ENST00000534675 GALR2O43603 387 aaPredicted RBP15.63■□□□□ 0.09
LINC02235-201ENST00000534675 PHF12Q96QT6 1004 aa15.57■□□□□ 0.08
LINC02235-201ENST00000534675 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
LINC02235-201ENST00000534675 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
LINC02235-201ENST00000534675 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
LINC02235-201ENST00000534675 PROM2Q8N271 834 aa15.4■□□□□ 0.06
LINC02235-201ENST00000534675 POTEB2H3BUK9 544 aa15.38■□□□□ 0.05
LINC02235-201ENST00000534675 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
LINC02235-201ENST00000534675 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
LINC02235-201ENST00000534675 OTUD5Q96G74 571 aa15.34■□□□□ 0.05
LINC02235-201ENST00000534675 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
LINC02235-201ENST00000534675 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
LINC02235-201ENST00000534675 ATMINO43313 823 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms