RNA–Protein interactions for RNA: ENST00000534388.1

AP000790.2-201, humanhuman

TSL 3 BASIC

Gene AP000790.2, Length 522 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000790.2-201ENST00000534388 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
AP000790.2-201ENST00000534388 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
AP000790.2-201ENST00000534388 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
AP000790.2-201ENST00000534388 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
AP000790.2-201ENST00000534388 FOXD1Q16676 465 aa20.11■□□□□ 0.81
AP000790.2-201ENST00000534388 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
AP000790.2-201ENST00000534388 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
AP000790.2-201ENST00000534388 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
AP000790.2-201ENST00000534388 MSH5O43196 834 aa18.81■□□□□ 0.6
AP000790.2-201ENST00000534388 ADRA2BP18089 450 aa18.78■□□□□ 0.6
AP000790.2-201ENST00000534388 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
AP000790.2-201ENST00000534388 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
AP000790.2-201ENST00000534388 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
AP000790.2-201ENST00000534388 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
AP000790.2-201ENST00000534388 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
AP000790.2-201ENST00000534388 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
AP000790.2-201ENST00000534388 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
AP000790.2-201ENST00000534388 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
AP000790.2-201ENST00000534388 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
AP000790.2-201ENST00000534388 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
AP000790.2-201ENST00000534388 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
AP000790.2-201ENST00000534388 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
AP000790.2-201ENST00000534388 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
AP000790.2-201ENST00000534388 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
AP000790.2-201ENST00000534388 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
AP000790.2-201ENST00000534388 KCNA4P22459 653 aa15.75■□□□□ 0.11
AP000790.2-201ENST00000534388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
AP000790.2-201ENST00000534388 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
AP000790.2-201ENST00000534388 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
AP000790.2-201ENST00000534388 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
AP000790.2-201ENST00000534388 CAPN15O75808 1086 aa15.15■□□□□ 0.02
AP000790.2-201ENST00000534388 DSG3P32926 999 aa15.04■□□□□ -0
AP000790.2-201ENST00000534388 APLP2Q06481 763 aa14.98□□□□□ -0.01
AP000790.2-201ENST00000534388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
AP000790.2-201ENST00000534388 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
AP000790.2-201ENST00000534388 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
AP000790.2-201ENST00000534388 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
AP000790.2-201ENST00000534388 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
AP000790.2-201ENST00000534388 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
AP000790.2-201ENST00000534388 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
AP000790.2-201ENST00000534388 ABCB7O75027 752 aa14.81□□□□□ -0.04
AP000790.2-201ENST00000534388 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
AP000790.2-201ENST00000534388 POLA2Q14181 598 aa14.5□□□□□ -0.09
AP000790.2-201ENST00000534388 ZBTB22O15209 634 aa14.49□□□□□ -0.09
AP000790.2-201ENST00000534388 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
AP000790.2-201ENST00000534388 RBM42Q9BTD8 480 aaKnown RBP14.37□□□□□ -0.11
AP000790.2-201ENST00000534388 POTEHQ6S545 545 aa14.34□□□□□ -0.11
AP000790.2-201ENST00000534388 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
AP000790.2-201ENST00000534388 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
AP000790.2-201ENST00000534388 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
AP000790.2-201ENST00000534388 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
AP000790.2-201ENST00000534388 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
AP000790.2-201ENST00000534388 FBLN2P98095 1184 aa13.9□□□□□ -0.18
AP000790.2-201ENST00000534388 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
AP000790.2-201ENST00000534388 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
AP000790.2-201ENST00000534388 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
AP000790.2-201ENST00000534388 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
AP000790.2-201ENST00000534388 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
AP000790.2-201ENST00000534388 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
AP000790.2-201ENST00000534388 PITPNM1O00562 1244 aa13.77□□□□□ -0.21
AP000790.2-201ENST00000534388 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
AP000790.2-201ENST00000534388 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
AP000790.2-201ENST00000534388 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
AP000790.2-201ENST00000534388 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
AP000790.2-201ENST00000534388 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
AP000790.2-201ENST00000534388 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
AP000790.2-201ENST00000534388 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
AP000790.2-201ENST00000534388 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
AP000790.2-201ENST00000534388 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
AP000790.2-201ENST00000534388 HAX1O00165 279 aa13.43□□□□□ -0.26
AP000790.2-201ENST00000534388 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
AP000790.2-201ENST00000534388 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
AP000790.2-201ENST00000534388 EVX2Q03828 476 aa13.27□□□□□ -0.29
AP000790.2-201ENST00000534388 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
AP000790.2-201ENST00000534388 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
AP000790.2-201ENST00000534388 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
AP000790.2-201ENST00000534388 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
AP000790.2-201ENST00000534388 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
AP000790.2-201ENST00000534388 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
AP000790.2-201ENST00000534388 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
AP000790.2-201ENST00000534388 GABBR2O75899 941 aa12.97□□□□□ -0.33
AP000790.2-201ENST00000534388 PROM2Q8N271 834 aa12.86□□□□□ -0.35
AP000790.2-201ENST00000534388 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
AP000790.2-201ENST00000534388 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
AP000790.2-201ENST00000534388 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
AP000790.2-201ENST00000534388 CLCN6P51797 869 aa12.76□□□□□ -0.37
AP000790.2-201ENST00000534388 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
AP000790.2-201ENST00000534388 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
AP000790.2-201ENST00000534388 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
AP000790.2-201ENST00000534388 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
AP000790.2-201ENST00000534388 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
AP000790.2-201ENST00000534388 GALR2O43603 387 aaPredicted RBP12.63□□□□□ -0.39
AP000790.2-201ENST00000534388 LHX8Q68G74 356 aa12.62□□□□□ -0.39
AP000790.2-201ENST00000534388 FKBP8Q14318 412 aa12.57□□□□□ -0.4
AP000790.2-201ENST00000534388 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
AP000790.2-201ENST00000534388 MIER1Q8N108 512 aa12.54□□□□□ -0.4
AP000790.2-201ENST00000534388 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
AP000790.2-201ENST00000534388 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
AP000790.2-201ENST00000534388 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
AP000790.2-201ENST00000534388 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms