RNA–Protein interactions for RNA: ENST00000534200.1

DDX20-205, Transcript of DEAD-box helicase 20, humanhuman

TSL 2

Gene DDX20, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20-205ENST00000534200 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
DDX20-205ENST00000534200 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
DDX20-205ENST00000534200 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
DDX20-205ENST00000534200 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
DDX20-205ENST00000534200 FOXD1Q16676 465 aa17.74■□□□□ 0.43
DDX20-205ENST00000534200 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
DDX20-205ENST00000534200 MSH5O43196 834 aa16.78■□□□□ 0.28
DDX20-205ENST00000534200 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
DDX20-205ENST00000534200 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
DDX20-205ENST00000534200 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
DDX20-205ENST00000534200 ADRA2BP18089 450 aa16.3■□□□□ 0.2
DDX20-205ENST00000534200 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
DDX20-205ENST00000534200 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
DDX20-205ENST00000534200 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
DDX20-205ENST00000534200 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
DDX20-205ENST00000534200 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
DDX20-205ENST00000534200 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
DDX20-205ENST00000534200 HOXD11P31277 338 aaPredicted RBP14.36□□□□□ -0.11
DDX20-205ENST00000534200 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
DDX20-205ENST00000534200 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
DDX20-205ENST00000534200 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
DDX20-205ENST00000534200 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
DDX20-205ENST00000534200 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
DDX20-205ENST00000534200 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
DDX20-205ENST00000534200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX20-205ENST00000534200 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
DDX20-205ENST00000534200 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
DDX20-205ENST00000534200 CAPN15O75808 1086 aa13.31□□□□□ -0.28
DDX20-205ENST00000534200 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
DDX20-205ENST00000534200 DSG3P32926 999 aa13.24□□□□□ -0.29
DDX20-205ENST00000534200 POTEHQ6S545 545 aa13.18□□□□□ -0.3
DDX20-205ENST00000534200 KCNA4P22459 653 aa13.09□□□□□ -0.31
DDX20-205ENST00000534200 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
DDX20-205ENST00000534200 APLP2Q06481 763 aa13.04□□□□□ -0.32
DDX20-205ENST00000534200 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
DDX20-205ENST00000534200 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
DDX20-205ENST00000534200 ABCB7O75027 752 aa12.95□□□□□ -0.34
DDX20-205ENST00000534200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
DDX20-205ENST00000534200 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
DDX20-205ENST00000534200 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
DDX20-205ENST00000534200 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
DDX20-205ENST00000534200 POLA2Q14181 598 aa12.58□□□□□ -0.4
DDX20-205ENST00000534200 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
DDX20-205ENST00000534200 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
DDX20-205ENST00000534200 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
DDX20-205ENST00000534200 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
DDX20-205ENST00000534200 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
DDX20-205ENST00000534200 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
DDX20-205ENST00000534200 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
DDX20-205ENST00000534200 SP7Q8TDD2 431 aaPredicted RBP12.21□□□□□ -0.45
DDX20-205ENST00000534200 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
DDX20-205ENST00000534200 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
DDX20-205ENST00000534200 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
DDX20-205ENST00000534200 HAX1O00165 279 aa12.08□□□□□ -0.48
DDX20-205ENST00000534200 ZBTB22O15209 634 aa12.08□□□□□ -0.48
DDX20-205ENST00000534200 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
DDX20-205ENST00000534200 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
DDX20-205ENST00000534200 ATXN8OSP0DMR3 200 aa11.99□□□□□ -0.49
DDX20-205ENST00000534200 FBLN2P98095 1184 aa11.91□□□□□ -0.5
DDX20-205ENST00000534200 SPDYE2BA6NHP3 402 aa11.9□□□□□ -0.5
DDX20-205ENST00000534200 SPDYE6P0CI01 402 aa11.9□□□□□ -0.5
DDX20-205ENST00000534200 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
DDX20-205ENST00000534200 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
DDX20-205ENST00000534200 EVX2Q03828 476 aa11.79□□□□□ -0.52
DDX20-205ENST00000534200 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
DDX20-205ENST00000534200 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
DDX20-205ENST00000534200 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
DDX20-205ENST00000534200 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
DDX20-205ENST00000534200 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
DDX20-205ENST00000534200 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
DDX20-205ENST00000534200 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
DDX20-205ENST00000534200 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
DDX20-205ENST00000534200 GABBR2O75899 941 aa11.56□□□□□ -0.56
DDX20-205ENST00000534200 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
DDX20-205ENST00000534200 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
DDX20-205ENST00000534200 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
DDX20-205ENST00000534200 LHX8Q68G74 356 aa11.47□□□□□ -0.57
DDX20-205ENST00000534200 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
DDX20-205ENST00000534200 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
DDX20-205ENST00000534200 CLCN6P51797 869 aa11.32□□□□□ -0.6
DDX20-205ENST00000534200 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
DDX20-205ENST00000534200 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
DDX20-205ENST00000534200 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
DDX20-205ENST00000534200 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
DDX20-205ENST00000534200 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
DDX20-205ENST00000534200 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
DDX20-205ENST00000534200 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
DDX20-205ENST00000534200 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
DDX20-205ENST00000534200 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
DDX20-205ENST00000534200 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
DDX20-205ENST00000534200 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
DDX20-205ENST00000534200 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
DDX20-205ENST00000534200 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
DDX20-205ENST00000534200 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
DDX20-205ENST00000534200 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
DDX20-205ENST00000534200 PROM2Q8N271 834 aa10.85□□□□□ -0.67
DDX20-205ENST00000534200 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
DDX20-205ENST00000534200 POTEMA6NI47 508 aa10.81□□□□□ -0.68
DDX20-205ENST00000534200 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
DDX20-205ENST00000534200 METRNQ9UJH8 293 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms