RNA–Protein interactions for RNA: ENST00000533713.5

APLP2-221, Transcript of amyloid beta precursor like protein 2, humanhuman

TSL 4

Gene APLP2, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP2-221ENST00000533713 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.12■■□□□ 1.452e-21■■■■■ 33.8
APLP2-221ENST00000533713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.66■■■□□ 2.825e-18■■□□□ 14
APLP2-221ENST00000533713 DDX3XO00571 662 aaKnown RBP eCLIP21.16■□□□□ 0.985e-18■■■□□ 18.2
APLP2-221ENST00000533713 HLTFQ14527 1009 aaKnown RBP eCLIP20.98■□□□□ 0.952e-16■□□□□ 8.5
APLP2-221ENST00000533713 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.2■□□□□ 0.57e-16■■■□□ 17.7
APLP2-221ENST00000533713 CSTF2P33240 577 aaKnown RBP eCLIP20.68■□□□□ 0.93e-15■■■■■ 49.6
APLP2-221ENST00000533713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.9■■■□□ 2.225e-15■■□□□ 12.3
APLP2-221ENST00000533713 RPS3P23396 243 aaKnown RBP eCLIP20.11■□□□□ 0.816e-14■■■□□ 17
APLP2-221ENST00000533713 RBFOX2O43251 390 aaKnown RBP eCLIP15.73■□□□□ 0.112e-13■■■■□ 24.9
APLP2-221ENST00000533713 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.9■■■□□ 2.861e-12■□□□□ 10.3
APLP2-221ENST00000533713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.97■■□□□ 1.271e-12■■□□□ 13
APLP2-221ENST00000533713 NOLC1Q14978 699 aaKnown RBP eCLIP22.92■■□□□ 1.262e-12■■□□□ 11.7
APLP2-221ENST00000533713 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.58■□□□□ 0.722e-11■■■■■ 26.9
APLP2-221ENST00000533713 SND1Q7KZF4 910 aaKnown RBP eCLIP21.54■■□□□ 1.041e-10■■■■□ 21.7
APLP2-221ENST00000533713 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.73■□□□□ 0.754e-10■■■■□ 19.8
APLP2-221ENST00000533713 FMR1Q06787 632 aaKnown RBP eCLIP27.17■■□□□ 1.949e-10■□□□□ 10.8
APLP2-221ENST00000533713 PRPF4O43172 522 aaKnown RBP eCLIP19.83■□□□□ 0.772e-9■■□□□ 11.4
APLP2-221ENST00000533713 KHSRPQ92945 711 aaKnown RBP eCLIP23.86■■□□□ 1.412e-9■□□□□ 9.5
APLP2-221ENST00000533713 GTF2F1P35269 517 aaKnown RBP eCLIP23.74■■□□□ 1.395e-9■■■■■ 29.8
APLP2-221ENST00000533713 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.77■□□□□ 0.925e-9■□□□□ 10.3
APLP2-221ENST00000533713 HNRNPMP52272 730 aaKnown RBP eCLIP33.83■■■■□ 3.011e-8■■■■■ 28.9
APLP2-221ENST00000533713 ZNF622Q969S3 477 aaKnown RBP eCLIP27.79■■■□□ 2.041e-8■■■□□ 16.5
APLP2-221ENST00000533713 FXR2P51116 673 aaKnown RBP eCLIP23.19■■□□□ 1.32e-8■■■□□ 14.7
APLP2-221ENST00000533713 TRA2AQ13595 282 aaKnown RBP eCLIP20.75■□□□□ 0.912e-8■■□□□ 12.3
APLP2-221ENST00000533713 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.72■□□□□ 0.592e-8■■■■■ 72.2
APLP2-221ENST00000533713 NKRFO15226 690 aaKnown RBP eCLIP24.46■■□□□ 1.513e-8■■□□□ 12.6
APLP2-221ENST00000533713 AQRO60306 1485 aaKnown RBP eCLIP38.28■■■■□ 3.724e-8■■■■■ 32.3
APLP2-221ENST00000533713 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.23■□□□□ 0.674e-8■■■□□ 16.3
APLP2-221ENST00000533713 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.62■□□□□ 0.732e-7■■■■■ 102.3
APLP2-221ENST00000533713 MATR3P43243 847 aaKnown RBP eCLIP22.77■■□□□ 1.242e-7■■■■■ 26.8
APLP2-221ENST00000533713 HNRNPLP14866 589 aaKnown RBP eCLIP22.25■■□□□ 1.152e-7■■□□□ 13.7
APLP2-221ENST00000533713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.83■■■■□ 3.173e-7■■■□□ 19.1
APLP2-221ENST00000533713 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.52■■□□□ 1.047e-7■■■■■ 30.7
APLP2-221ENST00000533713 HNRNPKP61978 463 aaKnown RBP eCLIP21.22■□□□□ 0.998e-7■■■■□ 22.5
APLP2-221ENST00000533713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.77■■■□□ 2.368e-7■■□□□ 13.2
APLP2-221ENST00000533713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.2■■□□□ 1.141e-6■■■■■ 50.2
APLP2-221ENST00000533713 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■■□ 25
APLP2-221ENST00000533713 WRNQ14191 1432 aaPredicted RBP eCLIP37.54■■■■□ 3.61e-6■■■■■ 58.5
APLP2-221ENST00000533713 NIPBLQ6KC79 2804 aaeCLIP19.02■□□□□ 0.641e-6■■■□□ 18.6
APLP2-221ENST00000533713 BCCIPQ9P287 314 aaKnown RBP eCLIP21.99■■□□□ 1.112e-6■■□□□ 12.2
APLP2-221ENST00000533713 PUM1Q14671 1186 aaKnown RBP eCLIP22.39■■□□□ 1.172e-6■□□□□ 9.2
APLP2-221ENST00000533713 GPKOWQ92917 476 aaPredicted RBP eCLIP24.35■■□□□ 1.492e-6■■■■□ 20.4
APLP2-221ENST00000533713 NONOQ15233 471 aaKnown RBP eCLIP23.6■■□□□ 1.373e-6■■■■□ 20.4
APLP2-221ENST00000533713 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.41■■□□□ 1.664e-6■■■■□ 25.8
APLP2-221ENST00000533713 SF3B1O75533 1304 aaKnown RBP eCLIP23.08■■□□□ 1.294e-6■■■■■ 82.6
APLP2-221ENST00000533713 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.18■□□□□ 0.824e-6■■■■■ 54.9
APLP2-221ENST00000533713 SFPQP23246 707 aaKnown RBP eCLIP23.46■■□□□ 1.355e-6■□□□□ 9.3
APLP2-221ENST00000533713 HNRNPCP07910 306 aaKnown RBP eCLIP15.15■□□□□ 0.021e-5■□□□□ 9.8
Retrieved 48 of 48 RNA–protein pairs in 15.6 ms