RNA–Protein interactions for RNA: ENST00000533567.5

TPT1-213, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3

Gene TPT1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-213ENST00000533567 AEBP2Q6ZN18 517 aaPredicted RBP25.75■■□□□ 1.71
TPT1-213ENST00000533567 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
TPT1-213ENST00000533567 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
TPT1-213ENST00000533567 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
TPT1-213ENST00000533567 FOXD1Q16676 465 aa20.46■□□□□ 0.87
TPT1-213ENST00000533567 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
TPT1-213ENST00000533567 MSH5O43196 834 aa19.1■□□□□ 0.65
TPT1-213ENST00000533567 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
TPT1-213ENST00000533567 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
TPT1-213ENST00000533567 PIAS4Q8N2W9 510 aaPredicted RBP19.03■□□□□ 0.64
TPT1-213ENST00000533567 ADRA2BP18089 450 aa18.95■□□□□ 0.62
TPT1-213ENST00000533567 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
TPT1-213ENST00000533567 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
TPT1-213ENST00000533567 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
TPT1-213ENST00000533567 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
TPT1-213ENST00000533567 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
TPT1-213ENST00000533567 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
TPT1-213ENST00000533567 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
TPT1-213ENST00000533567 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
TPT1-213ENST00000533567 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
TPT1-213ENST00000533567 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
TPT1-213ENST00000533567 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
TPT1-213ENST00000533567 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
TPT1-213ENST00000533567 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
TPT1-213ENST00000533567 NPM3O75607 178 aaKnown RBP15.92■□□□□ 0.14
TPT1-213ENST00000533567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
TPT1-213ENST00000533567 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
TPT1-213ENST00000533567 KCNA4P22459 653 aa15.49■□□□□ 0.07
TPT1-213ENST00000533567 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
TPT1-213ENST00000533567 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
TPT1-213ENST00000533567 CAPN15O75808 1086 aa15.27■□□□□ 0.04
TPT1-213ENST00000533567 DSG3P32926 999 aa15.27■□□□□ 0.04
TPT1-213ENST00000533567 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
TPT1-213ENST00000533567 ABCB7O75027 752 aa14.97□□□□□ -0.01
TPT1-213ENST00000533567 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
TPT1-213ENST00000533567 POTEHQ6S545 545 aa14.88□□□□□ -0.03
TPT1-213ENST00000533567 APLP2Q06481 763 aa14.85□□□□□ -0.03
TPT1-213ENST00000533567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
TPT1-213ENST00000533567 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
TPT1-213ENST00000533567 SAMD1Q6SPF0 538 aaPredicted RBP14.79□□□□□ -0.04
TPT1-213ENST00000533567 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
TPT1-213ENST00000533567 POLA2Q14181 598 aa14.55□□□□□ -0.08
TPT1-213ENST00000533567 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
TPT1-213ENST00000533567 ATF5Q9Y2D1 282 aaPredicted RBP14.48□□□□□ -0.09
TPT1-213ENST00000533567 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
TPT1-213ENST00000533567 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
TPT1-213ENST00000533567 ZBTB22O15209 634 aa14.3□□□□□ -0.12
TPT1-213ENST00000533567 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
TPT1-213ENST00000533567 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
TPT1-213ENST00000533567 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
TPT1-213ENST00000533567 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
TPT1-213ENST00000533567 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
TPT1-213ENST00000533567 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
TPT1-213ENST00000533567 ATXN8OSP0DMR3 200 aa13.94□□□□□ -0.18
TPT1-213ENST00000533567 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
TPT1-213ENST00000533567 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
TPT1-213ENST00000533567 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPT1-213ENST00000533567 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
TPT1-213ENST00000533567 SPDYE2BA6NHP3 402 aa13.74□□□□□ -0.21
TPT1-213ENST00000533567 SPDYE6P0CI01 402 aa13.74□□□□□ -0.21
TPT1-213ENST00000533567 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
TPT1-213ENST00000533567 FBLN2P98095 1184 aa13.73□□□□□ -0.21
TPT1-213ENST00000533567 HAX1O00165 279 aa13.69□□□□□ -0.22
TPT1-213ENST00000533567 EVX2Q03828 476 aa13.64□□□□□ -0.23
TPT1-213ENST00000533567 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
TPT1-213ENST00000533567 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
TPT1-213ENST00000533567 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
TPT1-213ENST00000533567 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
TPT1-213ENST00000533567 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
TPT1-213ENST00000533567 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
TPT1-213ENST00000533567 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
TPT1-213ENST00000533567 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
TPT1-213ENST00000533567 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
TPT1-213ENST00000533567 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
TPT1-213ENST00000533567 GABBR2O75899 941 aa13.24□□□□□ -0.29
TPT1-213ENST00000533567 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
TPT1-213ENST00000533567 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TPT1-213ENST00000533567 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
TPT1-213ENST00000533567 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
TPT1-213ENST00000533567 CREBZFQ9NS37 354 aa13□□□□□ -0.33
TPT1-213ENST00000533567 LHX8Q68G74 356 aa12.98□□□□□ -0.33
TPT1-213ENST00000533567 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
TPT1-213ENST00000533567 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
TPT1-213ENST00000533567 ZNF579Q8NAF0 562 aaKnown RBP12.87□□□□□ -0.35
TPT1-213ENST00000533567 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
TPT1-213ENST00000533567 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
TPT1-213ENST00000533567 CLCN6P51797 869 aa12.79□□□□□ -0.36
TPT1-213ENST00000533567 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
TPT1-213ENST00000533567 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
TPT1-213ENST00000533567 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
TPT1-213ENST00000533567 PROM2Q8N271 834 aa12.65□□□□□ -0.38
TPT1-213ENST00000533567 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
TPT1-213ENST00000533567 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
TPT1-213ENST00000533567 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
TPT1-213ENST00000533567 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
TPT1-213ENST00000533567 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
TPT1-213ENST00000533567 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
TPT1-213ENST00000533567 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
TPT1-213ENST00000533567 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
TPT1-213ENST00000533567 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms